Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa02g1979 ATGTCGATCACTATGCAGTCAACCCCCGGAAGCTCAGGGTATTTAGAATTGTATCCTGAGAGGAAAATGTCGTTTTTCAAGAACCCTTATATTTTGGGTCTAACTTCTGTCGCTGGCATAGGTGGGCTGCTCTTTGGCTATGACACAGGTGTAATATCAGGAGCTCTTCTTTATATTAAAGATGATTTTCAAGCAGTTAAAAATAGTAGTTTTCTACAGGAAACAATTGTCAGCATGGCATTGATTGGTGCAATAATTGGAGCAGCTGTAGGTGGTTGGATTAATGATGCTTTTGGACGAAAGAAGGCCACCCTTTTAGCAGATGTTATCTTTACTATTGGAGCAGTTATCATGGCTGCTGCACCAGATCCTTATGTTCTCATATTGGGACGTCTTCTGGTTGGTGTGGGTGTGGGCATAGCTTCCGTTACTGCTCCTGTATATATTGCAGAATCATCACCATCAGAAATAAGGGGAGCATTAGTAAGCACAAATGTGCTCATGATAACTGGTGGACAGTTTCTTTCTTACCTCATAAATCTTGCTTTTACAGAGGTCCCTGGGACTTGGCGATGGATGTTGGGAGTTTCAGGTGTACCAGCAGTTTTGCAGTTCTTCCTCATGCTCTTCCTGCCTGAATCCCCCAGATGGCTCTTTCTCAGGAATAGGAAAAATGAAGCTGTTGTAGTTCTTACTAACATATATGACTATGCTCGCTTAGAGGATGAAGTTGAATTCCTAACAGCTCAGTATGAGCAAGAGAGCCAAAAAAGGAAAGATATCAGATACTCGGATGTGTTTAAATCAAAAGAAATCAGACTTGCTTTCTTTGTCGGAGCTGGAATGCAGGCTTTTCAGCAGTTCACAGGTATAAATACAGTCATGTACTACAGCCCAACAATTGTCCAAATGGCTGGATTCCAGTCTAAACAGTTGGCTCTTCAATTATCCCTCATTGTTGCCGGTATGAATGCTGCTGGTACTGTTCTTGGCATTTACCTTATTGACCATGCAGGGCGGAAAAAGTTGGCCCTTTCTAGCTTAGCTGGAGTAATTGCATCTCTGATCATACTGGCTGTGTCATTTATTAACCGATCTTCTGGCTCTTCAAAAGAATTGTTTGGGTGGCTTGCAGTTTTGGGTTTAGCCATGTATATTGGTTTCTTTGCACCTGGAATGGGACCTGTCCCATGGACTCTGAACTCAGAAATATATCCTGAAGAATATCGAGGATTATGTGGGGGCATGTCAGCAGTAGTGTGTTGGGTTTCAAATTTGATTGTGTCCCAGACCTTCCTCTCAGTTGCTGATGCTATAGGGACGGGTCAAACTTTCTTTATTTTAGGTGGTATAGCTATGCTTGCGTTTCTTTTTGTGGTTTTGTATGTTCCAGAGACCAAAGGATTGACATTTGATGAAGTGGAGCTGATATGGAAGGAGAGAGCTTGGGGCAAGAATCCAGACACGCAAGGCCTTGTTGACCGTGGAAATCAATCCTAG 1500 0.4267 MSITMQSTPGSSGYLELYPERKMSFFKNPYILGLTSVAGIGGLLFGYDTGVISGALLYIKDDFQAVKNSSFLQETIVSMALIGAIIGAAVGGWINDAFGRKKATLLADVIFTIGAVIMAAAPDPYVLILGRLLVGVGVGIASVTAPVYIAESSPSEIRGALVSTNVLMITGGQFLSYLINLAFTEVPGTWRWMLGVSGVPAVLQFFLMLFLPESPRWLFLRNRKNEAVVVLTNIYDYARLEDEVEFLTAQYEQESQKRKDIRYSDVFKSKEIRLAFFVGAGMQAFQQFTGINTVMYYSPTIVQMAGFQSKQLALQLSLIVAGMNAAGTVLGIYLIDHAGRKKLALSSLAGVIASLIILAVSFINRSSGSSKELFGWLAVLGLAMYIGFFAPGMGPVPWTLNSEIYPEEYRGLCGGMSAVVCWVSNLIVSQTFLSVADAIGTGQTFFILGGIAMLAFLFVVLYVPETKGLTFDEVELIWKERAWGKNPDTQGLVDRGNQS 499
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa02g1979 499 ProSitePatterns Sugar transport proteins signature 1. 331 347 IPR005829 GO:0016020|GO:0022857|GO:0055085
Bisa02g1979 499 Gene3D MFS general substrate transporter like domains 26 482 IPR036259 -
Bisa02g1979 499 FunFam MFS myo-inositol transporter, putative 26 481 - -
Bisa02g1979 499 PRINTS Sugar transporter signature 286 296 IPR003663 GO:0016020|GO:0022857|GO:0055085
Bisa02g1979 499 PRINTS Sugar transporter signature 379 400 IPR003663 GO:0016020|GO:0022857|GO:0055085
Bisa02g1979 499 PRINTS Sugar transporter signature 402 414 IPR003663 GO:0016020|GO:0022857|GO:0055085
Bisa02g1979 499 PRINTS Sugar transporter signature 128 147 IPR003663 GO:0016020|GO:0022857|GO:0055085
Bisa02g1979 499 PRINTS Sugar transporter signature 42 52 IPR003663 GO:0016020|GO:0022857|GO:0055085
Bisa02g1979 499 Pfam Sugar (and other) transporter 35 478 IPR005828 GO:0016020|GO:0022857|GO:0055085
Bisa02g1979 499 ProSitePatterns Sugar transport proteins signature 2. 133 158 IPR005829 GO:0016020|GO:0022857|GO:0055085
Bisa02g1979 499 NCBIfam sugar porter family MFS transporter 27 474 IPR003663 GO:0016020|GO:0022857|GO:0055085
Bisa02g1979 499 PANTHER PROTON MYO-INOSITOL COTRANSPORTER 20 489 - -
Bisa02g1979 499 CDD MFS_HMIT_like 37 465 - -
Bisa02g1979 499 ProSiteProfiles Major facilitator superfamily (MFS) profile. 34 467 IPR020846 GO:0022857
Bisa02g1979 499 SUPERFAMILY MFS general substrate transporter 27 475 IPR036259 -
Bisa02g1979 499 Coils Coil 237 257 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa02g1979 Bisa-ChrBisa02 42831409 42840541 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa02g1979 1 499 Organic Solute Cotransporters AT2G43330 73.477 0.0 736