Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa02g1973 ATGGCTTCTCACTACTCTTCTAGGTTTCTTCAAAACAGGTCATTCTCCGGATTTAATCCAGTGATTAACATTAGCTCTAGCCAACTAATTGAGAGCAAAGAGGAGATTTACTTTATGAGAAGAACAGTCACCCAGGTCACAAATCAAAGGACTTGTGAAGCATATGCAGAGTATTCATGTTTGCCTCCAGGTATAATTTTAGGAGAGCATCTTTTTTCGTCAACGGCAGCAAGAAGACGTTTGAGCGACTCCAATGATGATGCCATCATTAGCCCTAAAATCCCATCTTTAAGAGAGGGTGGTGGTGGAACTCGAATCAATGATGAGAATGTTGTGCGTGAGCGTGATGGTCGAACCCATAGCCTTCCTTATCAGAAATATGGGCCTTACACATGCCCTAACTGCAATAGAGAGTTTCCCACGTCGCAGCACTTCGCAGCACATATGAATTCCCATTACAAGAATGAAACTCCCGCTCAAAGGAAAAGGCGACTCCAAGCAAGATTAAGAAGCAAAAATAAAAGCCTTCAGCTTTCCCAGACGCAAGATGGTTTGACCTTAATTCCTCATCATTCTAACCCATTAACTAGAATGAGCAACACTGAAACTGCAATTCAACCAAAATTTAATCCTCATGGATCATCATACTCTGGCGTCCAAATCAAGGATGAGCCTGGCCATATCTAA 687 0.4221 MASHYSSRFLQNRSFSGFNPVINISSSQLIESKEEIYFMRRTVTQVTNQRTCEAYAEYSCLPPGIILGEHLFSSTAARRRLSDSNDDAIISPKIPSLREGGGGTRINDENVVRERDGRTHSLPYQKYGPYTCPNCNREFPTSQHFAAHMNSHYKNETPAQRKRRLQARLRSKNKSLQLSQTQDGLTLIPHHSNPLTRMSNTETAIQPKFNPHGSSYSGVQIKDEPGHI 228
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa02g1973 228 ProSitePatterns Zinc finger C2H2 type domain signature. 132 152 IPR013087 -
Bisa02g1973 228 ProSiteProfiles Zinc finger C2H2 type domain profile. 130 157 IPR013087 -
Bisa02g1973 228 Gene3D Classic Zinc Finger 111 184 - -
Bisa02g1973 228 Pfam Zinc finger, C2H2 type 130 152 IPR013087 -
Bisa02g1973 228 SUPERFAMILY beta-beta-alpha zinc fingers 128 156 IPR036236 -
Bisa02g1973 228 SMART c2h2final6 130 152 IPR013087 -
Bisa02g1973 228 MobiDBLite consensus disorder prediction 207 228 - -
Bisa02g1973 228 MobiDBLite consensus disorder prediction 172 195 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa02g1973 Bisa-ChrBisa02 42649859 42650713 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa02g1973 116 172 C2H2 Transcription Factor Family AT2G15740 68.421 6.65e-22 90.1
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Bisa02g1973 zf-C2H2 2.5e-05 CL0361