Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Bisa02g1939 | ATGTTAAACAATTTCCTCAACGCAAAAGTCCAGAAAAGGCTTAAGCAGAAGAAGCCTGCCAATGCAAAAAATCCCAATCCCCCCATTGATTTTGCGGAGACATTGGACGCTTCTGGGTTTGATAACACGCTGGAACGCCATGATCCCAAGTCAAAATCATCTAATGCAAGGGAACACCATGAGCCCATGCCAAAATTATCTAACGTTGAAGAAACGCTGGCACAGGCCACTCCCCGAGGCAAGCAATCCGTTAAAGCCCGACTCAAAGCACTCATTTCTGAAGAGATCGCCAGGAAGAAGGGTCGACACAAACGAAGTTCCACCTTCCCTGTAAAGCCCCAGCTCACCCAACCACCTCCTTCTCCTGTCTCTGATCTCGACCTCGTCGCTCCATCCTTACCACTTCTCCCACAGACCCCCACTCTTAACAACGATGTATGTGTAGAGTGTGGCACCAGGTTTTCCACTGACTGCACCACTCAAATTCACAAGCATAAGCAACCCTTATATCATCAGGCATCTTACAGAGAACCCTCAACCCATGATGAAGAGAAATCAATGCATGCCAGGTTACTCACCACTGATGTTTCCCCTCATTTGTTCAAGGACTTTCTCGATGCTCTTGATATAATCAATACCAACAAGGACTTGCTGTTGAAATTTCTACAGCATCCTCGTTCTCCTATGCTCACCCACATTCATGACCAAACTGCAAAATCCAAATTGAACAAGTCTGTTTCATTTCCTGCACCTACAGGGGAGACACGAATAGAACAGAATGAAAGTCAAACACAATATGCACCCATCGATACGATGTCCTTGGAATCTTCAGAACAATCTTACCAGCACTCTCTGCCCTTGGAATCTTCTAATAGCAGACTCGAAACGACGTCGTCACGGGTTCCATTGAGGACTCAAAACTACGTGGTTCTGAAGCGTTTCAAGGATCTTCGAGAGAAGTTAAAACATGTTATTGAAGAGAACAGAAACGAGAAACGCCGGATAACTATGGATGCCGTACATCACAAGATTCCTTGTGGGAATAAGCTTTCGAATAACGAGCTCAAGAAGATTCTTCAGCAGTCCAAAGATCCTGTGTTGGGAGATTCTTCGAGCCAATCTGAGGGTTTCAACAAGCGACAAGTGTCCCCAATAAGGACTTCATCATTGAATGAATCAGTGGGGAGATACACTCAGCTGTATGAAACTTGCTTTAACAGAGAAACCAAGTACCCCAAATCAGAGAGATTAAAATTAAAAGAAAAGGAGAGAAATTCAGTATTAAAGAAGACTCAAAAATGCTTGCAACGGTTTCTCTCACTGCCTAATCTTGAAACTTACTTCTCTCAAGGTGAGGAGCCTTCTTCTTCGGTTTTACCTCCTCGGATTCCAGCCATGAAAATTGGTGGAGAGAGAAATATAACTCCAGAGAGTGTTTCTATAAGTTTCCAGAAGGAAATTGGGATGAGAAGTGGTGCATGGCTTGGGTCGGATGAGGATAAGGAGGAGTCAAATCAGAAGGAGAGCGTAGGGACTGATGGTGATTTTGGGAAACTGACAGATAGTGATAGCAATGAGCTAGATAGTAGCGAATCAAATTTCATAGTGGCTGAAGCAAAATCAAACGCTTTTTCTGACTTCAGTTATTTAGATGATACAATCGACTTTGACGAGGACATATCTTTACCGGAAGATTCAGAAATAAAGCCAGGACCAACTGCAGGATTGGATTTGGATCTTTTGTCATTGCAATTACAAGAGGCTAACATTGACGTTCATCGAGAAGCAGTAAGAAGAAGCGAAGATGACTTTATAAATTCTTGCGCTCAAAATAAGCGTTTGGACTTGGGAATTCCTGGTCCTGAAGTCGTCGCAATCAGCGAAGCCGAATTCAACTATGTCAAAGATGTATTAGAGCTAGCGGGGTTTTTCACGTCCCAAGAGCCCCTCGAGATATGGTATTCCCATGACCAACCAATCGACCCCATAGTGTACGAAGAACTAGAGAGAATCTTCCCGTTCTATCCAGAAACTTCTGGTAAAAACTGCAATCGCTTGCGTCTCTTTGACTTGATCAACGAGGTATTGGTGGATATACTAGGGAGATCGCACAGTTATTACCCGAAGCCCTTGTCTTCGTTGTCCCAGATTCATCCGAAGCTCGCAGTGGACCAAGTGGTGCAAGAAGTGTGGACGTCGATTAGTTGGTGTTTGGGGTCAAAGTCTTCGGAGTTACATCCTTCGTTGGATTACTATGTGAGCAGAGACCTGGCGAGAAGTGATGGGTGGATGAATCTGCAGTTTGATTCCGAGTGTGTGGGGCTTGAGCTTGATGACATGATTTTTAATGATCTTTTGGAGGAAATAATCTGCTGCAGCTAG | 2382 | 0.4416 | MLNNFLNAKVQKRLKQKKPANAKNPNPPIDFAETLDASGFDNTLERHDPKSKSSNAREHHEPMPKLSNVEETLAQATPRGKQSVKARLKALISEEIARKKGRHKRSSTFPVKPQLTQPPPSPVSDLDLVAPSLPLLPQTPTLNNDVCVECGTRFSTDCTTQIHKHKQPLYHQASYREPSTHDEEKSMHARLLTTDVSPHLFKDFLDALDIINTNKDLLLKFLQHPRSPMLTHIHDQTAKSKLNKSVSFPAPTGETRIEQNESQTQYAPIDTMSLESSEQSYQHSLPLESSNSRLETTSSRVPLRTQNYVVLKRFKDLREKLKHVIEENRNEKRRITMDAVHHKIPCGNKLSNNELKKILQQSKDPVLGDSSSQSEGFNKRQVSPIRTSSLNESVGRYTQLYETCFNRETKYPKSERLKLKEKERNSVLKKTQKCLQRFLSLPNLETYFSQGEEPSSSVLPPRIPAMKIGGERNITPESVSISFQKEIGMRSGAWLGSDEDKEESNQKESVGTDGDFGKLTDSDSNELDSSESNFIVAEAKSNAFSDFSYLDDTIDFDEDISLPEDSEIKPGPTAGLDLDLLSLQLQEANIDVHREAVRRSEDDFINSCAQNKRLDLGIPGPEVVAISEAEFNYVKDVLELAGFFTSQEPLEIWYSHDQPIDPIVYEELERIFPFYPETSGKNCNRLRLFDLINEVLVDILGRSHSYYPKPLSSLSQIHPKLAVDQVVQEVWTSISWCLGSKSSELHPSLDYYVSRDLARSDGWMNLQFDSECVGLELDDMIFNDLLEEIICCS | 793 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Bisa02g1939 | 793 | Coils | Coil | 311 | 334 | - | - | |
| Bisa02g1939 | 793 | MobiDBLite | consensus disorder prediction | 493 | 528 | - | - | |
| Bisa02g1939 | 793 | MobiDBLite | consensus disorder prediction | 495 | 509 | - | - | |
| Bisa02g1939 | 793 | Pfam | Protein of unknown function (DUF3741) | 184 | 227 | IPR022212 | - | |
| Bisa02g1939 | 793 | MobiDBLite | consensus disorder prediction | 241 | 265 | - | - | |
| Bisa02g1939 | 793 | MobiDBLite | consensus disorder prediction | 1 | 68 | - | - | |
| Bisa02g1939 | 793 | MobiDBLite | consensus disorder prediction | 277 | 299 | - | - | |
| Bisa02g1939 | 793 | MobiDBLite | consensus disorder prediction | 40 | 66 | - | - | |
| Bisa02g1939 | 793 | PANTHER | PROTEIN TRM32 | 10 | 792 | IPR044257 | - | |
| Bisa02g1939 | 793 | MobiDBLite | consensus disorder prediction | 99 | 122 | - | - | |
| Bisa02g1939 | 793 | Pfam | Domain of unknown function (DUF4378) | 630 | 788 | IPR025486 | - | |
| Bisa02g1939 | 793 | Coils | Coil | 583 | 603 | - | - | |
| Bisa02g1939 | 793 | MobiDBLite | consensus disorder prediction | 361 | 384 | - | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Bisa02g1939 | Bisa-ChrBisa02 | 41523123 | 41528510 | Transposed |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Bisa02g1939 | 23 | 782 | TRM (TON1 Recruiting Motif) Superfamily | AT5G02390 | 31.740 | 3.42e-88 | 295 |