Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa02g1938 ATGCAATACCCACAAATTCTTTTTCTGTTTACCATTTTGGTGATCCTATTTTGCAGTGCTAGCAATGCCAAAATTTGTTCTAATCCTTCAAAAATTATCATTGTTGACAAGTCAGGGCAAGGGACATTCAAAACCATTCAAAGCGCTATTGACTCTCTTCCCATCAACAATTCTCAGTGGATTCATATCAAAATTTCTCAAGGAACTTATGCGGAAAAAATAGCAATGCCGGATTACAAGCCGTGCATATTTCTTGAGGGAGCTGGAATTTCGTCCACCATCATTCAATGGAACGATCATATAAGAATGGGTAACTGTACCACTTTTGAAACCACTGCAACAAACATCATAGCAAGGGGCATTACTTTCATGAACACATATAGTAGACCACCCAGGTCAGATGGAGGCAATGTACCAGCAATTGCAGCCAAAGTACGTGGAGACCAATCTGCTTTCTATAACTGTGCCTTCAAAGGGGTGCAAGACACCTTGTACGATGCCTATGGCCGCCATTACTTCCGTGACTGCTATATTCAAGGCTCTCTAGATTTCATATTTGGAAATGGCCAGTCAATATATGAGAACTGCACAATAAGTCATAGGGACGGGCCATATGGTCACCCAGGGCTGAGTGGTTTTATAACAGCACAACAAAGAATCTCGCAGAATGAGCCAACTGGGTTTGTGTTCAACAGATGCACCGTCACTGGGGATGGGAAAACCCAACTTGGAAGAGCTTACGGAAGCTTCTCCAGGGTTATTTTCGCCTATTCATATTTCTCAGATGTCGTCGACCCAAAGGGATGGTTTGCTTGGAATAATCGTGGCCATGAAGGAAACTTGACATACGTGGAAGAGGGATGCATAGGACCAGGAGCAAACAAGTCAATGCGAGTGCCTTGGATGAAGCACATGGACAAGACGGAGCTCGAGAAGTTCGTGAGTCTCTCCTATATCGACCAAGACAGATGGCTTTCCAATCGACCAAGTAGTTTTTAG 999 0.4354 MQYPQILFLFTILVILFCSASNAKICSNPSKIIIVDKSGQGTFKTIQSAIDSLPINNSQWIHIKISQGTYAEKIAMPDYKPCIFLEGAGISSTIIQWNDHIRMGNCTTFETTATNIIARGITFMNTYSRPPRSDGGNVPAIAAKVRGDQSAFYNCAFKGVQDTLYDAYGRHYFRDCYIQGSLDFIFGNGQSIYENCTISHRDGPYGHPGLSGFITAQQRISQNEPTGFVFNRCTVTGDGKTQLGRAYGSFSRVIFAYSYFSDVVDPKGWFAWNNRGHEGNLTYVEEGCIGPGANKSMRVPWMKHMDKTELEKFVSLSYIDQDRWLSNRPSSF 332
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Bisa02g1938 332 Pfam Pectinesterase 33 321 IPR000070 GO:0030599|GO:0042545
Bisa02g1938 332 ProSitePatterns Pectinesterase signature 2. 178 187 IPR033131 -
Bisa02g1938 332 SUPERFAMILY Pectin lyase-like 28 327 IPR011050 -
Bisa02g1938 332 Gene3D - 26 331 IPR012334 -
Bisa02g1938 332 FunFam Pectinesterase 27 329 - -
Bisa02g1938 332 PANTHER ACYL-COA THIOESTER HYDROLASE YBHC-RELATED 23 326 - -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Bisa02g1938 Bisa-ChrBisa02 41477054 41479222 Proximal
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa02g1938 27 325 Carbohydrate Esterase AT1G05310 39.869 1.88e-76 238