Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa02g1934 ATGGGTATCAGAGCGAGTGGGCACTTCCTTGACGACCCACACACTACTATCATAACGGCACACCTCATCAATGTTGTACCCTCTTTCGCCTTCGAAATGTTAACGCCAACATTGGTACCCAAACTCGAGCCCTTGGACGAATTGTTTGCGACCCAAGAGCACGAAGAACAAGAACCCCACGAGGCCACCGTTTCGACTCCCGATCCTGATACATTATCTGATTTCAAGCCTCCTTTTGTTGAAATCCCACCAGGTGTATCGACGGAAGAGCACAATGTGTACTCAGAGTTCAATCGAATTTCTGAGCTCTTTAGGGCTGCATTTGCCGAGAATGTACAACAATTGGGAGATGACAACGTGTCGAACCTAGATTCACTAGCAATTGTTCCCGTGCCACAGAATAACAGCCAGGTTTCTTCGGTGGTTGTTACTCGAAAGCGGAAGTGCAAGCACTTAAAGGAGCTGGTGCGGGTCAACGATATTAGGATTGAGGACGAAAGGAGTTTCCGTAATGAAGTCAGAAGGACCAGGATGATCTATGATTCATTGCGCATTTTGTCATCAGTGCGGGAGAAGCAAAGTAGTGATTTAGTTAAACCTAAGCGGCTCCAAGGTGATGCAAGGGCTGCCACTTTGATGAGATATCGCGGGTTGTGGCTTAATCGTGATAAGCGGATAGTGGGTGCAATTCCAGGCATTTATGTTGGTGATTTATTCTTTTATAGGATGGAACTGATAGTACTCGGGTTGCACTGTCAATCCCAAGCTGGTATTGATTATCTTCCTGCAACCATGAGTCCCAATGGAGAGCCAATAGCAACTAGTGTCATCGTCTCGGGTGGATATGAAGATGACATAGATGATGGTGATGTGATAGTCTATACAGGACATGGAGGGCAAGATAAGAAGCACTCAAGGCAAGTAGTTGACCAGAAGTTGAAAGGAGGGAACCTTGCACTGGAAAGAAGCATGCGGTTTGGGGTTGAAGTCCGGGTTATTCGAGGGATTAAATATAAGGGAAGTGCTTCAACATCAAACAAGGTCTATGTTTATGATGGCTTATATAAAATTATTGCTTGCTGGTTTGAATTAGGCAAGTCTGGTTTTGGAGTTTACAAGTATAAACTTTTGAGAATTGATGGGCAAGAAAAATTGGGTAGTGCAAGTCTTAAACGCGCTCAGCTTCTTAGGGCTAACCCATTGTCATGTGATTCCATGTGTTATCTTAGTCTTGATATTTCGCTCAGTAAAGAGAATGTTCCGGTTCGTCTTTTCAATGACATAGATACCGATAATGACCCTCTTCGTTATGAGTATCTGACAAGGACTAGTTTCCCTCATTTTGTATTTCATCAAAGTGGGAGTGCCACTGGTTGTGACTGCGTGGAAGGTTGTGCTGATAACTGCTTTTGTGCTATAAAAAATGGAGGTGAATATCCTTATAATCAAAAGGGAATTCTCTTTAGAGGGAAGCCTATAATTTTTGAATGTGGCCCATTTTGTCGTTGTCCACCACATTGTCGGAATCGTGTTACACAAAAGGGGTTGAAAATTAGATTGGAAGTATTTAGGTCTAGGGAAACAGGTTGGGGAGTTAGGTCCCTAGATCTTATTCAAGCAGGTGCTTTTATTTGTGAATATACTGGGATTGTCGTAACAAAGCAGCAAGCACAAATTTTGACAATGAATGGTGGTGATGCATTGATATATCCAAATCAGTTTTCTGAGAGGTGGGCTGAATGGGGGGATTTATCTCAGGTATACCCTGATTATGTGCGTCCATCATATCCCTCAATTCCTCCGTTAGATTTTGCCTTGGATGTGTCAACAATGAGAAATGTTGCTTGCTATATGAGCCACGGTTCAGTTCCAAATGTGTTTGTTCAGTTTGTTCTCTATGATCACAACAATTTGATGTTTCCTCACCTTATGCTTTTTGCAATGGAGAACATCCCTCCATTGAGGGAGCTCAGCTTTGATTATGGAGTGGCTGGCGATGGCCCAGGCAAGCTCTTTATTTGCAACTGA 2028 0.4324 MGIRASGHFLDDPHTTIITAHLINVVPSFAFEMLTPTLVPKLEPLDELFATQEHEEQEPHEATVSTPDPDTLSDFKPPFVEIPPGVSTEEHNVYSEFNRISELFRAAFAENVQQLGDDNVSNLDSLAIVPVPQNNSQVSSVVVTRKRKCKHLKELVRVNDIRIEDERSFRNEVRRTRMIYDSLRILSSVREKQSSDLVKPKRLQGDARAATLMRYRGLWLNRDKRIVGAIPGIYVGDLFFYRMELIVLGLHCQSQAGIDYLPATMSPNGEPIATSVIVSGGYEDDIDDGDVIVYTGHGGQDKKHSRQVVDQKLKGGNLALERSMRFGVEVRVIRGIKYKGSASTSNKVYVYDGLYKIIACWFELGKSGFGVYKYKLLRIDGQEKLGSASLKRAQLLRANPLSCDSMCYLSLDISLSKENVPVRLFNDIDTDNDPLRYEYLTRTSFPHFVFHQSGSATGCDCVEGCADNCFCAIKNGGEYPYNQKGILFRGKPIIFECGPFCRCPPHCRNRVTQKGLKIRLEVFRSRETGWGVRSLDLIQAGAFICEYTGIVVTKQQAQILTMNGGDALIYPNQFSERWAEWGDLSQVYPDYVRPSYPSIPPLDFALDVSTMRNVACYMSHGSVPNVFVQFVLYDHNNLMFPHLMLFAMENIPPLRELSFDYGVAGDGPGKLFICN 675
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa02g1934 675 Pfam SET domain 529 662 IPR001214 GO:0005515
Bisa02g1934 675 SUPERFAMILY SET domain 404 667 IPR046341 -
Bisa02g1934 675 ProSiteProfiles YDG domain profile. 228 378 IPR003105 -
Bisa02g1934 675 Gene3D SET domain 387 673 IPR046341 -
Bisa02g1934 675 Pfam SAD/SRA domain 227 382 IPR003105 -
Bisa02g1934 675 Gene3D - 225 386 IPR036987 -
Bisa02g1934 675 SMART G9a_1 223 382 IPR003105 -
Bisa02g1934 675 SMART preset_2 410 502 IPR007728 GO:0005634|GO:0008270|GO:0034968|GO:0042054
Bisa02g1934 675 Pfam Pre-SET motif 414 510 IPR007728 GO:0005634|GO:0008270|GO:0034968|GO:0042054
Bisa02g1934 675 ProSiteProfiles Pre-SET domain profile. 457 515 IPR007728 GO:0005634|GO:0008270|GO:0034968|GO:0042054
Bisa02g1934 675 ProSiteProfiles Histone-lysine N-methyltransferase (EC 2.1.1.43) family profile. 80 675 IPR025794 GO:0016571
Bisa02g1934 675 SUPERFAMILY PUA domain-like 209 388 IPR015947 -
Bisa02g1934 675 ProSiteProfiles SET domain profile. 518 662 IPR001214 GO:0005515
Bisa02g1934 675 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE SETMAR 82 663 - -
Bisa02g1934 675 SMART set_7 518 668 IPR001214 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa02g1934 Bisa-ChrBisa02 41261524 41264204 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa02g1934 120 664 Su(var)3-9 homologs AT5G04940 38.104 2.70e-107 338
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Bisa02g1934 SAD_SRA 5e-48 CL0178