Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa02g1915 ATGTCTACACTCGACGTCCATTGCCTGCAGTCCCTTTTAGACTTCAACTTTTCTCTCTTTTCAGGGATGGAGTCCCTTGGTTTTGTGGATGACCTCTTGAATTTCTCATCAGACATAGGAGAGGAAGATGACGAGGAAGATAAACCCAAGAAAGCTTATCCTTCACTTAGCCTGAAATGCAGTGATCCAGCATCATTCAATGCTTTGGATGCAGATGATCCAAGCCATTCTTTTTCTGAGTTTGCAGAAGAAGAGCTTGAATGGCTATCCAACAAAGATGCTTTCCCTGCTGTTGAAACATTTGTTGACATGCTCTCTGTGCAACCCAACTTATCAAATCACCAAACCAAAGTCTCGATGCTTGAATACAGTGCAAGCAGTACAAACAGTAATAACAGTACTAACAGTGTTACCCTCTTAGATGGCTATAATCACCTAAAGGTCCCTGTCCGTGCACGGAGCAAGCGTCGGAGTAGGCATCATGGTGGCCTTGCTGATATCTCCGGCCCACAATTCTGGTGGAACCATCCAAGTAACAGAATTACCAAAACAGAAGCAGTGATTACAGTCTCAACAATTGGGAGGAAATGTCAGCACTGCGGAGCAGAAAAAACTCCACAATGGCGGGCAGGGCCCCTTGGGCCAAAAACACTTTGTAATGCATGCGGGGTTAGGTACAAGTCTGGGCGGCTTGTGCCTGAATACCGCCCTGCTAGTAGCCCTACGTTTCATAGTGAGTTGCATTCAAATTCCCACAGGAAGATAATGGAGATGAGGAAGCAAAAGCAAATGGGAGGCCACAGATGA 807 0.4585 MSTLDVHCLQSLLDFNFSLFSGMESLGFVDDLLNFSSDIGEEDDEEDKPKKAYPSLSLKCSDPASFNALDADDPSHSFSEFAEEELEWLSNKDAFPAVETFVDMLSVQPNLSNHQTKVSMLEYSASSTNSNNSTNSVTLLDGYNHLKVPVRARSKRRSRHHGGLADISGPQFWWNHPSNRITKTEAVITVSTIGRKCQHCGAEKTPQWRAGPLGPKTLCNACGVRYKSGRLVPEYRPASSPTFHSELHSNSHRKIMEMRKQKQMGGHR 268
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa02g1915 268 CDD ZnF_GATA 196 243 IPR000679 GO:0006355|GO:0043565
Bisa02g1915 268 PANTHER GATA TRANSCRIPTION FACTOR 28 263 - -
Bisa02g1915 268 ProSiteProfiles GATA-type zinc finger domain profile. 191 227 IPR000679 GO:0006355|GO:0043565
Bisa02g1915 268 ProSitePatterns GATA-type zinc finger domain. 197 222 IPR000679 GO:0006355|GO:0043565
Bisa02g1915 268 Gene3D - 192 266 IPR013088 GO:0006355|GO:0008270
Bisa02g1915 268 Pfam GATA zinc finger 197 230 IPR000679 GO:0006355|GO:0043565
Bisa02g1915 268 FunFam GATA transcription factor 188 268 - -
Bisa02g1915 268 SMART GATA_3 191 241 IPR000679 GO:0006355|GO:0043565
Bisa02g1915 268 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 193 254 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa02g1915 Bisa-ChrBisa02 40462380 40465712 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa02g1915 23 265 C2C2-Gata Transcription Factor Family AT3G24050 42.806 2.01e-53 172
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-GATA Bisa02g1915 GATA 9.9e-17 CL0167