Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa02g1877 ATGAAGCTTGAAAGAGCTTCTTATCTTTCCTTCTTTGTTAATGGTGATTCAGGAAAGTGTTTACTGGAATGGTCCAGAATGAAAGCTACTAGTTGGATAAGAAAGAGGAAATTCAGCATTCGAGGAAGACTGCGAAAAATGATCAAGTGTATATGTTCTAGGGAGCAAATAAGGGTAGATGAATTGGGTTATTCATCAGAGTCCTTGGCAACTAGGGACTATTCAGCAAGTCTTTATTCATCGCGGCCTGGTGAAATTGAAACAAATGTGGATAATAGCAACATTGAAGAAGCCGAGTCCTCTCTTCGCGAAAGTGGTTATTTGAATTATGAGGAAGCTAGAGCCTTGCTAGGAAGACTTGAGTATCAGAAAGGTAATTATGAAGCGGCTCTTCATGTGTTTGGAGGAATAGACATGGCTGCTATAACTCCCAAAATGAAAGCCTCCATATGCCGAAGATGTCAAACCGATAAGCGCCATTCCCAAAGTGATGCAGTCCCTTCTATGTCAATGCACGCAATTAGTTTACTCCTTGAAGCTGTTTTCCTCAAGGCAAAATCATTACAGACTCTTGGAAGGTTTCAAGAAGCTGCTCAATCATGCAAAACTATTTTAGATACGGTTGAATCTGCATTACCGGAAGGCCTGCCTGAAAACTTTGGATTGGACTTTAAGTTACATGAGACTCTAACGATGGCAGTGGAGCTGCTTCCCGAGTTGTGGAAGCTTGTTCAATCTCCTCAAGATGTGATCTTATCATATAGGAGAGCACTGCTTTACCATTGGAATCTTGACATTGAAACTACTGCAAGAATACAAAAGGAATTTGCTATGTTTCTTTTGTATAGCGGTTGTGAAGCAAACCCTCCGGCTCTTCGTTTGCAGTTGGACGGCTCCTTCGTGCCAAGAAACAACATAGAAGAGGCTGTGCTTCTGCTACTGATTCTGCTAAGGGATTTTGTTCTTGGAAGGACTGTTTGGGACCCTTCAATACTCAATCACCTGTCCTTTGCTCTATGTATTTCCGGGGAACTAACAACCGTGGCACATCATGTTGAGGAATTGCTTCCGGGAACAATAGAGAAAACAGAAAAGTATTCCACTCTAGCTCTTTGTTACTATGGGGAAGGTGAGCATTTGATTGCTTTGGATCTTTTGAGGAACTTCTTGAATAATCGTGAGAGCCCGGAATGCATACAAGAATTGCTATTGGCTTCAAAAATATGTGGAGAGAATGCAGTTTGTGTTGACGAAGGGATTAAGTTTTCTTGCAAAGCCATCTCTCAATTGCATGGAAAATGCCAGCAAATGATAGCAGTTGGGAATTGCTTACTAGGTGTTCTACTCTCCGTGAAATCCAGGTTGGCTGTTTCGGAATCAGAGAGGGTTTCAATGCAGTCTGAAGCACTCAGTGCACTAAAAACTGCTGAGAGAACAATGATGCAAAGGGATCCACATGTCGTCTTTCATCTTTGTCTAGAATATGCTGAGCAGAGGAAGTTGGATATTGCTCTTGACCATGCAAAGCAATTGGTTGAACTTGATGCTGGGTCTAGTGTTAAAGGATACATGCTTCTGGCACGGATTTTATCGGCTCGAAAACAGTTTTCTGATGCAGAAATTGTCATTGATGCTGCTTTGGATCAAGGTGGAAAATGGGATCAGGGAGAATTGTTGCAAACTAAAGCTAAACTGCAGATTGCTCAAGGCCACTTAAAGAACGCTCTTAAAACATACACTCTCCTTCTTGCTTTCATTCAGGTCCAGAATAAAAGTTTAGGCATTGCCAATAAGTTTCTGAAGAGTAAAGGGAACCGTGATCGAAGACTGGAAATGGAAACATGGCATGATTTAGCCAATATATATACCAATTTGTCGCAGTGGAGTGACGCTGAAGTCTGTCTTTCAAAATCTCAGGCTATCAATCCCTATTCTGCTTCTAGATGGCACTCAACAGGTCTGCTTTATGAAGCCAGAGGTCTTCACCAAGAAGCTCTGAAATCATTTAGGATGGCATTAGACATTGATCCCAACCACGTTCCAAGTTTGATATCCGCCGCCCATGTCCTCGGCGGGCTTGGCGGTCAATCATGGTCAGTAGCAAGAAGCCTTCTTTCTGATGCGCTACGGCTCGATCGAACAAACTCATCGGCTTGGTACAATTTAGGACTGCTTTACAAAGCCAATGAGGGGATATCAGAAGTAGAAGCTATTGAATGCTTTGAGGCAGCAGCTCTTCTTCAAGACTCTTCTCCTATTGAACCCTTTAGGCGTCCGGATCCTCTACCGTTGGGATATGGAGAAGGCAGGAAAATGTTGTTTACATTTTCTTTTTTCTCGGAGCTTGATCAAATTGGTGCTGTCAAGTTGAATGTGTATGGAGCTAACTATGGTGATGGTTTTGGAGCTCTGGGTGCCAGTGGGAGCTTTGTTTTTGGTTGA 2442 0.4259 MKLERASYLSFFVNGDSGKCLLEWSRMKATSWIRKRKFSIRGRLRKMIKCICSREQIRVDELGYSSESLATRDYSASLYSSRPGEIETNVDNSNIEEAESSLRESGYLNYEEARALLGRLEYQKGNYEAALHVFGGIDMAAITPKMKASICRRCQTDKRHSQSDAVPSMSMHAISLLLEAVFLKAKSLQTLGRFQEAAQSCKTILDTVESALPEGLPENFGLDFKLHETLTMAVELLPELWKLVQSPQDVILSYRRALLYHWNLDIETTARIQKEFAMFLLYSGCEANPPALRLQLDGSFVPRNNIEEAVLLLLILLRDFVLGRTVWDPSILNHLSFALCISGELTTVAHHVEELLPGTIEKTEKYSTLALCYYGEGEHLIALDLLRNFLNNRESPECIQELLLASKICGENAVCVDEGIKFSCKAISQLHGKCQQMIAVGNCLLGVLLSVKSRLAVSESERVSMQSEALSALKTAERTMMQRDPHVVFHLCLEYAEQRKLDIALDHAKQLVELDAGSSVKGYMLLARILSARKQFSDAEIVIDAALDQGGKWDQGELLQTKAKLQIAQGHLKNALKTYTLLLAFIQVQNKSLGIANKFLKSKGNRDRRLEMETWHDLANIYTNLSQWSDAEVCLSKSQAINPYSASRWHSTGLLYEARGLHQEALKSFRMALDIDPNHVPSLISAAHVLGGLGGQSWSVARSLLSDALRLDRTNSSAWYNLGLLYKANEGISEVEAIECFEAAALLQDSSPIEPFRRPDPLPLGYGEGRKMLFTFSFFSELDQIGAVKLNVYGANYGDGFGALGASGSFVFG 813
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa02g1877 813 Gene3D Tetratricopeptide repeat domain 62 414 IPR011990 GO:0005515
Bisa02g1877 813 PANTHER PROTEIN NPG1 48 757 IPR043376 -
Bisa02g1877 813 Gene3D Tetratricopeptide repeat domain 445 591 IPR011990 GO:0005515
Bisa02g1877 813 SUPERFAMILY TPR-like 484 584 IPR011990 GO:0005515
Bisa02g1877 813 Gene3D Tetratricopeptide repeat domain 592 757 IPR011990 GO:0005515
Bisa02g1877 813 ProSiteProfiles TPR repeat profile. 646 679 IPR019734 GO:0005515
Bisa02g1877 813 SMART tpr_5 716 751 IPR019734 GO:0005515
Bisa02g1877 813 SMART tpr_5 485 518 IPR019734 GO:0005515
Bisa02g1877 813 SMART tpr_5 520 553 IPR019734 GO:0005515
Bisa02g1877 813 SMART tpr_5 646 679 IPR019734 GO:0005515
Bisa02g1877 813 SMART tpr_5 178 211 IPR019734 GO:0005515
Bisa02g1877 813 SMART tpr_5 612 645 IPR019734 GO:0005515
Bisa02g1877 813 SMART tpr_5 363 396 IPR019734 GO:0005515
Bisa02g1877 813 Pfam Tetratricopeptide repeat 494 550 - -
Bisa02g1877 813 Pfam Tetratricopeptide repeat 648 679 IPR019734 GO:0005515
Bisa02g1877 813 SUPERFAMILY TPR-like 613 748 IPR011990 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa02g1877 Bisa-ChrBisa02 38383304 38389366 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa02g1877 30 757 Calmodulin-binding Proteins AT4G28600 54.412 0.0 735