Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa02g1865 ATGGATCACGTTATTGGCGGAAAATTCAAGCTCGGGCGGAAGATTGGGAGTGGCTCATTTGGCGAGCTTTATTTGGGCATTAATGTACAAGGTGGAGAGGAAGTGGCTGTCAAGCTGGAACCTGTAAAGACCAAGCATCCACAGCTTCACTATGAGTCAAAATTGTACATGTTTCTCCAAGGAGGAACTGGTATACCCCACTTAAAATGGTTTGGAGTTGAGGGTGACTACAATGTCATGGTTATTGATCTTCTTGGGCCAAGTTTAGAGGACTTGTTTAACTATTGCAATAGGAAATTCTCTCTGAAATCAGTTCTGATGCTTGCGGATCAGCTTATAAATAGAGTTGAGTACATGCATTCCCGGGGTTTTCTTCACCGTGATATAAAGCCTGACAACTTCTTAATGGGTTTAGGCCGCAAGGCAAATCAGGTATATGTTATTGATTATGGCCTTGCAAAAAAGTATCGCGATCTTCAAACGCATAAACACATACCCTACAGGGAAAACAAGAATCTCACTGGAACTGCTCGGTATGCCAGTGTCAACACGCACCTTGGAGTTGAACAAAGCAGAAGGGATGACCTTGAATCGCTTGGTTATGTGCTCATGTATTTTTTGAGAGGAAGTCTCCCTTGGCAGGGATTAAAAGCAGGCACTAAAAAGCAGAAATATGACAAGATAAGTGAAAAGAAGATGCTTACTCCAATAGAGGTCCTATGCAAGTCGTATCCATCGGAATTTACTTCATACTTCCACTATTGTCGCTCATTGCGGTTTGAAGACAAACCTGATTATTCATACCTAAAGAGACTTTTCCAGGACCTATTCATTAGAGAAGGCTATCAGTTTGACTATGTTTTTGATTGGACTATGTTGAAGTATCCTCAAATTGGATCCAGTTCTAGAGCTCGACCTAGTGGGAAACTGGCTGTAAACCCTGGACCATCTGCGGAGAGATTAGAGCGGCCTTCAGTTGGAAAAGAGATTCGGGATAGATTCTCAGGTGCAGTTGAGGCATTTGCTAGAAGGAATGGTTCTGGGCATGGTCTGCATGGTGATCACACTAGGCATAGGTCTTCAGATGATGTGCCATCTTCCCGAGATGTGCAACCTGATTCTGAGAGGGGTCATAGCTCTCGTAATGGCAGTGCCTCAAAAAGGGCTGTCATATCAAGCAGCCGACCAAGCTCTAGTGAGCTCACTGAAAGCCGTTCTAATCGAATGGTCTCAAGCAGTGGTCGTCTATCCACAACTCACAGAATTCAACCAGGGTTTGAGTCCAAGTCGACATCTTTTACCCGTGCTGCAGCCACAAGAGGTGGTCGTGATGACACACTCAAGAGCTTTGAGTTCCTGTCAATTGGCACAGGGAAAAGGAAATGA 1386 0.443 MDHVIGGKFKLGRKIGSGSFGELYLGINVQGGEEVAVKLEPVKTKHPQLHYESKLYMFLQGGTGIPHLKWFGVEGDYNVMVIDLLGPSLEDLFNYCNRKFSLKSVLMLADQLINRVEYMHSRGFLHRDIKPDNFLMGLGRKANQVYVIDYGLAKKYRDLQTHKHIPYRENKNLTGTARYASVNTHLGVEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYDKISEKKMLTPIEVLCKSYPSEFTSYFHYCRSLRFEDKPDYSYLKRLFQDLFIREGYQFDYVFDWTMLKYPQIGSSSRARPSGKLAVNPGPSAERLERPSVGKEIRDRFSGAVEAFARRNGSGHGLHGDHTRHRSSDDVPSSRDVQPDSERGHSSRNGSASKRAVISSSRPSSSELTESRSNRMVSSSGRLSTTHRIQPGFESKSTSFTRAAATRGGRDDTLKSFEFLSIGTGKRK 461
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa02g1865 461 CDD STKc_CK1_delta_epsilon 8 282 - -
Bisa02g1865 461 MobiDBLite consensus disorder prediction 344 443 - -
Bisa02g1865 461 ProSitePatterns Serine/Threonine protein kinases active-site signature. 124 136 IPR008271 GO:0004672|GO:0006468
Bisa02g1865 461 MobiDBLite consensus disorder prediction 300 329 - -
Bisa02g1865 461 MobiDBLite consensus disorder prediction 348 382 - -
Bisa02g1865 461 Gene3D Transferase(Phosphotransferase) domain 1 1 320 - -
Bisa02g1865 461 MobiDBLite consensus disorder prediction 383 437 - -
Bisa02g1865 461 ProSiteProfiles Protein kinase domain profile. 9 278 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa02g1865 461 FunFam Putative Casein kinase I 1 85 - -
Bisa02g1865 461 ProSitePatterns Protein kinases ATP-binding region signature. 15 38 IPR017441 GO:0005524
Bisa02g1865 461 SMART serkin_6 9 335 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa02g1865 461 SUPERFAMILY Protein kinase-like (PK-like) 4 290 IPR011009 -
Bisa02g1865 461 FunFam Casein kinase 1-like protein 1 329 - -
Bisa02g1865 461 Pfam Protein kinase domain 10 228 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa02g1865 461 PANTHER CASEIN KINASE-RELATED 9 400 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa02g1865 Bisa-ChrBisa02 37877384 37896293 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa02g1865 8 213 MAP Kinase Kinase Kinase AT3G06030 25.463 1.12e-13 71.2
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CK1_CK1 Bisa02g1865 Pkinase 5.7e-25 CL0016