Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa02g1842 ATGGAGGAGAAGAAGGACGAGACTCCGACAGAAGTCCGGTACCGGGGGGTCCGACGACGGCCGTGGGGAAAGTTTGCGGCGGAGATAAGGGACCCGACAAGGAAAGGGGCAAGGCTGTGGCTGGGGACATATGGAACAGCAGAAGAAGCAGCAAGAGCTTATGATCGAGCTGCTTATAACTTTAGGGGTCCTCTTGCAGTTCTTAATTTTCCCAGTGAGTATTTTCCTCCTCCTCAACCGCAACCTCAACCTCCTCAAGTGCCATATTTCTCTTCTTCTTTGGCTTCTCATGGCGATGGCGATGGTGCCAGTGGAAGTTCTTCACAGCAGAGGGAGGTTTTTGAGTTTGAGTGTTTGGATGATAAGGTTTTGGAAGAGCTTCTTGAGTCAGAAGAGGAGAAGAAGAAAAGGATGGAAGATTGA 423 0.5012 MEEKKDETPTEVRYRGVRRRPWGKFAAEIRDPTRKGARLWLGTYGTAEEAARAYDRAAYNFRGPLAVLNFPSEYFPPPQPQPQPPQVPYFSSSLASHGDGDGASGSSSQQREVFEFECLDDKVLEELLESEEEKKKRMED 140
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa02g1842 140 MobiDBLite consensus disorder prediction 88 111 - -
Bisa02g1842 140 Gene3D AP2/ERF domain 12 72 IPR036955 GO:0003700|GO:0006355
Bisa02g1842 140 MobiDBLite consensus disorder prediction 72 87 - -
Bisa02g1842 140 SUPERFAMILY DNA-binding domain 13 72 IPR016177 GO:0003677
Bisa02g1842 140 CDD AP2 13 71 IPR001471 GO:0003700|GO:0006355
Bisa02g1842 140 Pfam AP2 domain 13 63 IPR001471 GO:0003700|GO:0006355
Bisa02g1842 140 PRINTS Ethylene responsive element binding protein signature 14 25 IPR001471 GO:0003700|GO:0006355
Bisa02g1842 140 PRINTS Ethylene responsive element binding protein signature 37 53 IPR001471 GO:0003700|GO:0006355
Bisa02g1842 140 SMART rav1_2 13 77 IPR001471 GO:0003700|GO:0006355
Bisa02g1842 140 PANTHER DNA-BINDING DOMAIN 6 134 IPR044808 GO:0003700|GO:0009873
Bisa02g1842 140 MobiDBLite consensus disorder prediction 72 111 - -
Bisa02g1842 140 ProSiteProfiles AP2/ERF domain profile. 13 71 IPR001471 GO:0003700|GO:0006355
Bisa02g1842 140 Coils Coil 121 140 - -
Bisa02g1842 140 FunFam Ethylene-responsive transcription factor 2 12 73 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa02g1842 Bisa-ChrBisa02 36209177 36209599 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa02g1842 11 135 AP2-EREBP Transcription Factor Family AT3G23230 66.400 6.89e-50 154
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Bisa02g1842 AP2 3.6e-16 CL0081