Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa02g1832 ATGATGCAAGTAGCAACTCTGGCTAATCCTTGGTGGACCAGTCAGGTGGGGCTGCTGGGGGTTGACCTGGCGGCGAATTCTCCTGCGATGAATAAACGCCATAGCACCGACCTCTCTATAAACGAAAGCAGCGGCAAGAACGGTAGTGGTGGTGACAATAGAGACGAAGTCGACGAAGACAGAGACGAGCCCAAAGAAGGGGCAGTTGAAGTCGGAACCCGCCGGCCCAGAGGCCGGCCTCCTGGGTCCAAGAACAAGCCCAGACCGCCGATCTTCGTGACCCGGGACAGCCCGAACGCACTCCGGAGCCACGTCATGGAGATCACCGGCGGGGCTGATGTCGCCGAGAGCATAGCACACTTCGCCCGACGCCGCCAGCGTGGAGTCTGTGTGCTTAGCGGAAGCGGCTCCGTCGCTAACGTCACCATCCGGCAGCCCTCAGCACCCGGCGCTGTGGTGGCGCTCCACGGAAGGTTCGAGATTCTGTCCCTAACCGGGGCGTTCCTGCCGGGGCCCTCCCCACCTGGATCCACTGGGCTGACGGTGTACCTAGCTGGCGGGCAGGGGCAGATTATCGGAGGGAGCGTGGTTGGGTCGCTGGTGGCGGTGGGGCCGGTGATGGTGATTGCAGCTACTTTTGCTAATGCAACTTATGAGAGACTGCCGCTTGAAGATGACGAGGAGGGTGGCAGTGCGGCGGCGGAGGGAGGGGGCGGAGGATCGCCCCCGCCGGTGATCGGAAGTAGCGGGGGACACTTGCAGGGGGGGATTCCGGATCCTTCGTCGCTTCCTCTGTATAATCTGCCGCCAAATCTTATGCCCAACGGAGGGCACATGGGGCATGAGGCTCTTGCTTGGGCTCATGGAAGACCTCCTTTCTAG 882 0.619 MMQVATLANPWWTSQVGLLGVDLAANSPAMNKRHSTDLSINESSGKNGSGGDNRDEVDEDRDEPKEGAVEVGTRRPRGRPPGSKNKPRPPIFVTRDSPNALRSHVMEITGGADVAESIAHFARRRQRGVCVLSGSGSVANVTIRQPSAPGAVVALHGRFEILSLTGAFLPGPSPPGSTGLTVYLAGGQGQIIGGSVVGSLVAVGPVMVIAATFANATYERLPLEDDEEGGSAAAEGGGGGSPPPVIGSSGGHLQGGIPDPSSLPLYNLPPNLMPNGGHMGHEALAWAHGRPPF 293
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa02g1832 293 PIRSF ESCAROLA 18 293 IPR014476 GO:0003680
Bisa02g1832 293 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 45 289 IPR014476 GO:0003680
Bisa02g1832 293 MobiDBLite consensus disorder prediction 32 98 - -
Bisa02g1832 293 ProSiteProfiles PPC domain profile profile. 98 237 IPR005175 -
Bisa02g1832 293 FunFam AT-hook motif nuclear-localized protein 101 228 - -
Bisa02g1832 293 SUPERFAMILY AF0104/ALDC/Ptd012-like 98 226 - -
Bisa02g1832 293 CDD DUF296 102 213 IPR005175 -
Bisa02g1832 293 Pfam Plants and Prokaryotes Conserved (PCC) domain 102 214 IPR005175 -
Bisa02g1832 293 MobiDBLite consensus disorder prediction 49 73 - -
Bisa02g1832 293 MobiDBLite consensus disorder prediction 32 48 - -
Bisa02g1832 293 Gene3D - 101 231 - -
Bisa02g1832 293 MobiDBLite consensus disorder prediction 225 261 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa02g1832 Bisa-ChrBisa02 35818664 35821261 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa02g1832 7 293 AT-hook Motif Nuclear Localized (AHL) Family AT4G14465 63.230 9.20e-108 312