Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa02g1799 ATGGAAAGCAAAGTGGCATATGAGAACGATCTGAATCTCAAGGACACAGAGCTTAGATTGGCTCTGCCAGGAACAGAGGAAAGAGAAGACCAACCCCTGCCTACTGCTAAGAACAACAAGAGGCCTTTGCCTGAAGCTTCTGAGAACTGTGGATCTAAGGATTCTAAAGATCCAGCCCCTCCTGCCAAGGCAAAGATAGTGGGGTGGCCTCCCATCAGATCTTACAGGAAGAACAGCCTGCAGGAGGCTGAGGGTTCAGGGATCTATGTGAAAGTGAGTATGGATGGAGCCCCTTATCTCAGGAAGATTGATTTGAGGGTCTACGATGGATATCCTGAACTCCTTAAGGCTCTGGAAAACATGTTCAAGCTAACCATAGGTCAGTACAATGAAAGAGAGGGCTACAAGGGGTCAGAATATGCACCTACTTATGAGGACAAGGACGGTGACTGGATGCTTGTTGGAGATGTTCCATGGGATATGTTTATGACTTCCTGCAAAAGGTTAAGAATCATGAAAGGATCAGAAGCTAGAGGATTGGGGTGTGGAGTATGA 555 0.4685 MESKVAYENDLNLKDTELRLALPGTEEREDQPLPTAKNNKRPLPEASENCGSKDSKDPAPPAKAKIVGWPPIRSYRKNSLQEAEGSGIYVKVSMDGAPYLRKIDLRVYDGYPELLKALENMFKLTIGQYNEREGYKGSEYAPTYEDKDGDWMLVGDVPWDMFMTSCKRLRIMKGSEARGLGCGV 184
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa02g1799 184 Gene3D - 81 184 - -
Bisa02g1799 184 PANTHER AUXIN-RESPONSIVE PROTEIN IAA17 11 178 IPR003311 GO:0005634|GO:0006355
Bisa02g1799 184 FunFam Auxin-responsive protein 82 184 - -
Bisa02g1799 184 MobiDBLite consensus disorder prediction 16 66 - -
Bisa02g1799 184 SUPERFAMILY CAD & PB1 domains 77 173 - -
Bisa02g1799 184 MobiDBLite consensus disorder prediction 16 35 - -
Bisa02g1799 184 ProSiteProfiles PB1 domain profile. 87 174 IPR000270 GO:0005515
Bisa02g1799 184 Pfam AUX/IAA family 49 181 IPR033389 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa02g1799 Bisa-ChrBisa02 34317325 34318257 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa02g1799 90 183 B3 DNA Binding Superfamily AT4G23980 34.043 1.38e-10 57.4
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR AUX/IAA Bisa02g1799 AUX_IAA 1.2e-52 CL0072