LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Bisa02g1793	ATGCCAAGTTGCAAGCACCATAACGTTTCTGCTCTGTTCATCTTCTTCTTCCTCCTTCATCTTCTTTATCCTTCACAAGCCCAGACCCAGACTCTTATACAACCAAACAGCACAGGCTACAAGTGCCCGGCCAACCAGACCAACAGTACCTACACCTATCCATGCCAAACATATGCTTTCTATCGAGCCTCGGCTCCAGATTTCCTTGACCTCGGCTCCATCGGTGACCTCTTTTCCGTTAGCCGCCTCATGATTTCGAACCCAAGTAACATCTCTTCACCTTCCACCCGTTTAGTCCCGAACCAGCCCCTCTTTATTCCACTCTCTTGCGGTTGCAACAACATCAACTCAACCTTCGGTGCCATCTCTTATGCGAACCTCTCCTACACCATCAAGCCCAATGACACCTTCTACCTCGTCTCCACCAACAAATTTCAGAATCTCACGACCTACCAATCTGTGGAAGTCGTAAACCCTACCCTCATCCCGACGAATCTGCCGATTGGGGTTAACGTCGTGTTCCCAGTGTTCTGCAAGTGCCCTAACAGCACGCAATTGCGGAACGGAGAGAATTTGCTGATCTCATATGTAGTTCAACCATCCGATAACGTCTCGTCGATTGCTTCTAGATTTGGATCGCAATCGAAGTCTATAAGCGATCTTAATGGGAACGGTTTCCGGGAATTCGATACTATTTTCGTTCCGGTGTCGCGATTGCCGGTGCTGTCTCAGACTACGGCTTCTCCTCCTGCTTCCTCTCCTACTTCTTCTCCTTCTGGATCATCTGATGATCGAACTGGCACTGTTAGAGGATTGGCGATTGGGTTAGGGATTGTAGGGTTATTGTTGATCTTGGTTTCTGGAATTTGGGTTTACAGGGAGGTTCTGTTCAAGGATCGAGTGTGGCTGGAGGGAGATGAGGAGAAACAAAAGCAGAGCTTTTATGCGGGAGGCAAGGAGACGAAAGGGTCGAAGGAAATGGAGGTGAAACTGATGGCGAATGTGTCAGATTGCTTGGACAAGTATAGGGTTTTTGAGTTTGAGGAATTGAGAGAAGCCACGAATGGGTTCGATGAGAGTTGCTTGATTCTTGGGTCTGTGTACAAAGGGACAATTGATGGAGAGGTCTATGCTATCAAGAAGATGAAGTGGAATGCCTACGAGGAGCTCAAGATCTTACAGAAGGTGAACCATGGGAATCTGGTGAAGTTAGAGGGATTTTGCATAGATGCAGATGAAGCGAACTGCTATTTAGTCTACGAATACGTCGAAAATGGGTCCCTCTACTCGTGGCTGCACGAGGACCGAACCGAGAGGCTGAACTGGAAAACGAGGCTTCGCATCGCCATCGACGTTGCCAACGGCCTCCAATACATCCACGAGCACACAAGGCCAAGGGTGGTGCACAAAGACATCAAGAGCAGCAACATCCTCTTAGACTCCAACATGAGAGCCAAAATAGCCAACTTTGGGCTCGCAAAGTCAGGAATGAACGCCATAACCATGCACATTGTGGGAACTCAAGGGTACATATCCCCAGAGTATCTAGCTGATGGCGTGGTCTCAACGAAGATGGACGTGTTCTCCTTTGGGGTGGTTTTGCTTGAACTGATTACAGGCAAAGAAGCAATTGATGAGGAAGGGAATCTGCTGTGGTCAAGTGCTTTGAGGACTTTTGAAGTGGGAAGTGAGCAAGAGAGGGGTAGGAGATTGAGGGACTGGTTGGATAGTGCTATTTTGAAGGAGACATGTTCAATGGAGAGCTTGATGGGTGTGCTCAATGTTGCACTTGCTTGTTTGCACAGAGAACCCACAAAGAGGCCTAGCATGGTGGATATTGTGTATGCTTTGTGTAAAAGTGAAGATACAGGCTTTGATACCTCAGATGATGGGATAGGCTCCCCCTTGGTGTCGGCCAGGTGA	1923	0.4826	MPSCKHHNVSALFIFFFLLHLLYPSQAQTQTLIQPNSTGYKCPANQTNSTYTYPCQTYAFYRASAPDFLDLGSIGDLFSVSRLMISNPSNISSPSTRLVPNQPLFIPLSCGCNNINSTFGAISYANLSYTIKPNDTFYLVSTNKFQNLTTYQSVEVVNPTLIPTNLPIGVNVVFPVFCKCPNSTQLRNGENLLISYVVQPSDNVSSIASRFGSQSKSISDLNGNGFREFDTIFVPVSRLPVLSQTTASPPASSPTSSPSGSSDDRTGTVRGLAIGLGIVGLLLILVSGIWVYREVLFKDRVWLEGDEEKQKQSFYAGGKETKGSKEMEVKLMANVSDCLDKYRVFEFEELREATNGFDESCLILGSVYKGTIDGEVYAIKKMKWNAYEELKILQKVNHGNLVKLEGFCIDADEANCYLVYEYVENGSLYSWLHEDRTERLNWKTRLRIAIDVANGLQYIHEHTRPRVVHKDIKSSNILLDSNMRAKIANFGLAKSGMNAITMHIVGTQGYISPEYLADGVVSTKMDVFSFGVVLLELITGKEAIDEEGNLLWSSALRTFEVGSEQERGRRLRDWLDSAILKETCSMESLMGVLNVALACLHREPTKRPSMVDIVYALCKSEDTGFDTSDDGIGSPLVSAR	640

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Bisa02g1793	640	PANTHER	LYSM-DOMAIN RECEPTOR-LIKE KINASE-RELATED	13	619	-	-
	Bisa02g1793	640	ProSiteProfiles	Protein kinase domain profile.	347	625	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Bisa02g1793	640	MobiDBLite	consensus disorder prediction	244	264	-	-
	Bisa02g1793	640	SMART	serkin_6	357	619	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Bisa02g1793	640	FunFam	PTI1-like tyrosine-protein kinase 3	423	628	-	-
	Bisa02g1793	640	CDD	LysM	194	223	IPR018392	-
	Bisa02g1793	640	Gene3D	Phosphorylase Kinase; domain 1	327	422	-	-
	Bisa02g1793	640	SUPERFAMILY	Protein kinase-like (PK-like)	341	617	IPR011009	-
	Bisa02g1793	640	Pfam	Protein kinase domain	365	614	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Bisa02g1793	640	Gene3D	Transferase(Phosphotransferase) domain 1	423	630	-	-
	Bisa02g1793	640	Pfam	LysM domain	196	225	IPR018392	-
	Bisa02g1793	640	ProSitePatterns	Serine/Threonine protein kinases active-site signature.	467	479	IPR008271	GO:0004672\|GO:0006468

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Bisa02g1793	Bisa-ChrBisa02	33912063	33918639	Transposed

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Bisa02g1793	13	619	Receptor kinase-like Gene Family	AT2G23770	33.649	1.99e-88	286

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	RLK-Pelle_LysM	Bisa02g1793		Pkinase	1.1e-40	CL0016