Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa02g1789 ATGTGCTTAACCATATGTGCTTGTGCATATTCTGATTCCAGATTGTCGCAAAGGAGTTCTCGTCCCGTGACACTGTGGGTTGCTTATTGCTGCGTTGTTACTCTTAACGCGCTCCTTTGCCCAACCCATATAGCCATGGAACCAGGGGCCCCGCCACCACGGCCGCCGCTGCCTCCTCCGTCCGGTGCCACCACCACCATCCTCGGAAAGTACCAATTGACCCGTCTACTGGGTCGCGGCAGCTTCGCCAAGGTCTACCAAGCTCGCTCCTTAATCGACGGAGCCACCGTAGCCGTGAAAATCATCGACAAGTCTAAAACCGACGCTGCCATGGAGCCCCGAATCGTTCGTGAGGTCGACGCTATGCGCCGCCTTCAGGACCACCAGAACATCCTTAAAATCCTTGAGGTCATGGCGACGAAAACCAAGATCTACCTCATCGTTGAGTTCGCAGCAGGCGGCGAGCTCTTCTCGAGAATCTCGCGCAAAGGACGGATGACGGAGCCGATGGCCCGACGGTACTTCCAGCAATTGGTCTCCGCTCTCTGTTTCTGCCACCAAAACGGCGTTGCACACCGCGACATCAAGCCTCAGAACCTGCTGTTAGATGATAACGGAAATCTTAAGGTCTCGGATTTCGGACTCTCTGCTTTGCCTGAACATCTGAAAAACGGCTTGCTTCACACGGCCTGCGGCACGCCGGCTTACACGGCACCGGAGGTTCTCCGCCGGCGCAGCTACGACGGCTCCAAAGCCGACGCGTGGTCGTGCGGCCTCATCCTTTACGTGCTGCTCGCCGGCTATCTCCCATTCTCGGACGCGAACATCCCGGAGATGTGCAAGAAGATCAGCCGGCGCGATTATGTTTTCCCGGACTGGATTTCCAAGCCGGCGCGCTTCGTGATTCACCGACTACTCGACCCGAACCCGAAAACTCGGATGAGCTTGGAATCCCTATATCAAAACTCGTGGTTCAAGAAATCGCTCAAGGCCCGACCCGAAGAGAGCGTATTCGAGTCGGGTCCGTATGCGAAATCGTACTGCAAACCGGAAATAATGGGTTCGGGCATGAACGCTTTCGACATAATATCCATGTCGTCGGGCTTGGACTTGAGGGGGCTGTTCGAAACGACGTTGGATAACAGGAAAGAAAAGAGGTTCACATCGAATGCTTCAATCGGCGTAGTAGAGGAGAAGGTGAAGGAAATAGGAGGGGTTTTGGGGTTCAAAGTGGAGATAGGGAAAAATGGAGCTATTGGGTTAGGGAAAGGGAAGGTGATTCTGGTGGTGGAGGTGTTGGAAATAGTGCCTGAGTTGGTGTTGGTGGCGGTGAAAGTAATGGACGGTGGGTTAGAGTTCGATGAGCTTCACTGGGGAGATTGGAAAGCTGGCCTTCAAGATATTGTTGTTTCATGGCATAACGAAGCAGTGTGA 1434 0.5404 MCLTICACAYSDSRLSQRSSRPVTLWVAYCCVVTLNALLCPTHIAMEPGAPPPRPPLPPPSGATTTILGKYQLTRLLGRGSFAKVYQARSLIDGATVAVKIIDKSKTDAAMEPRIVREVDAMRRLQDHQNILKILEVMATKTKIYLIVEFAAGGELFSRISRKGRMTEPMARRYFQQLVSALCFCHQNGVAHRDIKPQNLLLDDNGNLKVSDFGLSALPEHLKNGLLHTACGTPAYTAPEVLRRRSYDGSKADAWSCGLILYVLLAGYLPFSDANIPEMCKKISRRDYVFPDWISKPARFVIHRLLDPNPKTRMSLESLYQNSWFKKSLKARPEESVFESGPYAKSYCKPEIMGSGMNAFDIISMSSGLDLRGLFETTLDNRKEKRFTSNASIGVVEEKVKEIGGVLGFKVEIGKNGAIGLGKGKVILVVEVLEIVPELVLVAVKVMDGGLEFDELHWGDWKAGLQDIVVSWHNEAV 477
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa02g1789 477 ProSitePatterns Serine/Threonine protein kinases active-site signature. 190 202 IPR008271 GO:0004672|GO:0006468
Bisa02g1789 477 Pfam Protein kinase domain 71 325 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa02g1789 477 ProSiteProfiles NAF domain profile. 352 376 IPR018451 GO:0007165
Bisa02g1789 477 CDD STKc_AMPK-like 70 324 - -
Bisa02g1789 477 SUPERFAMILY Protein kinase-like (PK-like) 67 336 IPR011009 -
Bisa02g1789 477 CDD CIPK_C 358 466 - -
Bisa02g1789 477 FunFam Non-specific serine/threonine protein kinase 61 350 - -
Bisa02g1789 477 FunFam Non-specific serine/threonine protein kinase 64 155 - -
Bisa02g1789 477 Gene3D Transferase(Phosphotransferase) domain 1 63 356 - -
Bisa02g1789 477 SMART serkin_6 71 325 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa02g1789 477 ProSitePatterns Protein kinases ATP-binding region signature. 77 100 IPR017441 GO:0005524
Bisa02g1789 477 ProSiteProfiles Protein kinase domain profile. 71 325 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa02g1789 477 PANTHER CALCIUM/CALMODULIN-DEPENDENT PROTEIN KINASE KINASE-RELATED 66 415 - -
Bisa02g1789 477 Gene3D Kinase associated domain 1, KA1 357 471 - -
Bisa02g1789 477 Pfam NAF domain 357 412 IPR004041 GO:0007165
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa02g1789 Bisa-ChrBisa02 33764526 33767652 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa02g1789 51 475 Miscellaneous Gene Families AT3G23000 57.737 8.47e-166 473
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CAMKL-CHK1 Bisa02g1789 Pkinase 3e-69 CL0016