Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa02g1769 ATGTCGCTCGACATGGAGCTGTCACCTAACGAGCAGCCCTTTGCAACTCTAAGTACGACCAGTTCTTTACCTCTAGGACTCATTATAGATACATGTGACAGCTGCAGGTTTGGGGACGACCTCCGAGCAACTCTAGATGATTTTGTAAAAGAGAAGAGTGTCAAGAGGCTTCGAGAGTATGGTGGGGTAAAAAAGGTAATTTCTGCTCTTAATACCGACGCTGCCGTTGGAATCCAGGCTGATGATGGCGCCACTGGCGTTCAGAGTCGCCGTGAAGTCTTTGGGTCGAACAATGACCCCACACCACGCTCCAAAGGTTTCTTTCATTTTGTGGGGAAAGCCTTCGAGGACCTCTTCATTCTCATCATTCTGTTTTTTGCTGCTCTTTCTCTTGGCTTCGGGATCAAACAAGACGGGCTTAAAGAAGGTTGGCATGACGGTGGAAGCATCTTTCTTCTTGTGTTTCTCAGCATTGCTGTGTCTTCCGCAATTAATTTCTGTCAGCACCGAGAATCAACCCGCAAGTTATCCCAAGTCACCAATGACATTCAGATCCGTGTCACAAGAAGTGGTCAAGACCAGCAGGTTTCGGTATGTGATATTGTAGTGGGTGATGTCGTTTGGTTGCAGGTCGGAGATCAAGTTCCTGCTGATGGATTGATCTTAAATGGCTTTCTGCAAGTGGACGAGTCAAGCATGACTGGGGAGAGTGGTCATGCCAAAGATAAAGGAAGGGGGGACCCATTCTTGTTCCGCGAAACCAAGGTGGTTGGTGGGGAAGCAAAAATGGTTGTAATCTCTGTGGGTATCAAAACAGCAGGCGGTCACGACAGGGAGGAGCGAACACCTTTAGGAGCAGCCAAGTATAAGCTCGCCTTATTAATGATAATGATCGGGATGATTGCAGCTTTATCTGTTTCTGCGGTTTCGTTGTTTCCTTACTTCACTGGAACTGGAAGCACAACACATGAGGAGGGAGGACATAAGGAATTCAATGAAGCCGCCATTCGAATTGTCTCTCTTGTCGTTGCTATTCTCATAATGGCAATTCTCCAAGGGTTGACACCGTTTGCTGCGACTCTAACCATGTTTTATTCAATGAAGAAGATGATGGATGGTCCGACACTGGTAAGAAAGCTCTCTGCTTGCGAGACGATGGGGTGTGCTCTCATTGCTTGTTTTGACAAGACCGGAACACTCACACTTAACCAGATGAAAGTGACGGAGTGCTGGCTTGGCCAACCACGTGTGAAGAAGGAAGATTACTCATCAGTTGCTCTTAATGTTATTGAACTAGTCCAAGAAGGAGTTGCTCTAAACACAATACGAGGTAATCCAACAGATGAAGCCCTTCTTTCGTTGGTCGCTGATGTTCTTCAGTCGGACTTGGACATGGACATGGAGCAATTGAAGGGAAATTGTGAAATCCTTTCCAGTGAAGCCTTCAATTCAGAGGCGAGACAAAGTTGGGTTTCGATAAGAAGAAAAGAAGACAATACATACCATGTACACTGGAAAGGTGCAGCTGAGGTGATACTTGGATTGTGTTCAAGATACTACGATAAATCGGGCAATGAAAAATGTATTGACAGGCGCAAAAAGAGGAAATTAAGGCAAAAAATTCACGCAATAGAGGAAAAAGGCCTCCGGTGTATTGCTCTTGCGCACCAAGAAGATGCAGAAAGAGAGGTAAAAGAAGCTGACCCAACCCTTTTAGGGTTTGTGGGTATTGATGATCCATGTCGTCCAGGGGCGAAGGAAGCTGTGGAAGAATGTAGACGTGCAGGTGTAAATGTGAAAATGATCACAGGTGACAGTATTGGCACTGCAAAATCTATAGCAATGCAATGTGGCATATTATTGCCTAATGAGGACATAGATGGAGCAGTGGTGGAAGGAGAGACATTTCGCAACTACGCACCTCAAAGAAGGTCGGAGGAAGCACCGAAAATCCGTGTTATGGCAAGATGCTCTCCGGGTGACAAACTTCTTCTGGTTGAATGCCTCAAAGAGAAAGGCGATGTAGTTGCAGTCTTCGGGGATGGCACAAATGACGCTCCAGCTTTGATTGCAGCAAACATAGGGTTTTGCATGGGGATTCAAGGCACCCAAGTGGCGAAAGAGAGCTCAGATATAGTCATCTTGGATGATAATTTCGGCTCTATAGTCACAGTTTTAAGGTGGGGAAGATGTGTGTATAATGACATCCAGAAGTTCATTCAAGTCCAGTTGTCAATGAATGCCGTTGCAATGACGATGAACGTTGTGGCAGCGGTCAGTGGGGGTCAACTACCTTTGAAAATTACACATTTATGTGAAGCCAACCTTATAATTTCTATCCTGGGAATTGTAGGTTTGGCCACCCGAAGTCTCACCGAACAGGAAAGGCCACCCATTGAACGGATCGAGACTCCCATCGGAGAATTCATAAGGATCATTACAGCTAAAGCGTTGTATTATATAACAATTCTCATGTGGCTTCAGTTGCACGGGGGAAAATCCATCTTTGGTGCTGATTCGAAGACAGCGGATATTTTCATCTTCAACATTTTGCTGCTTTATCACGTTTACAATGAATTTCGTCCCAGCAATCTGAGGCCCCTTCCAGCGTCGCAGCTTCTCCGTTTTATTGCAGCCTAA 2640 0.4568 MSLDMELSPNEQPFATLSTTSSLPLGLIIDTCDSCRFGDDLRATLDDFVKEKSVKRLREYGGVKKVISALNTDAAVGIQADDGATGVQSRREVFGSNNDPTPRSKGFFHFVGKAFEDLFILIILFFAALSLGFGIKQDGLKEGWHDGGSIFLLVFLSIAVSSAINFCQHRESTRKLSQVTNDIQIRVTRSGQDQQVSVCDIVVGDVVWLQVGDQVPADGLILNGFLQVDESSMTGESGHAKDKGRGDPFLFRETKVVGGEAKMVVISVGIKTAGGHDREERTPLGAAKYKLALLMIMIGMIAALSVSAVSLFPYFTGTGSTTHEEGGHKEFNEAAIRIVSLVVAILIMAILQGLTPFAATLTMFYSMKKMMDGPTLVRKLSACETMGCALIACFDKTGTLTLNQMKVTECWLGQPRVKKEDYSSVALNVIELVQEGVALNTIRGNPTDEALLSLVADVLQSDLDMDMEQLKGNCEILSSEAFNSEARQSWVSIRRKEDNTYHVHWKGAAEVILGLCSRYYDKSGNEKCIDRRKKRKLRQKIHAIEEKGLRCIALAHQEDAEREVKEADPTLLGFVGIDDPCRPGAKEAVEECRRAGVNVKMITGDSIGTAKSIAMQCGILLPNEDIDGAVVEGETFRNYAPQRRSEEAPKIRVMARCSPGDKLLLVECLKEKGDVVAVFGDGTNDAPALIAANIGFCMGIQGTQVAKESSDIVILDDNFGSIVTVLRWGRCVYNDIQKFIQVQLSMNAVAMTMNVVAAVSGGQLPLKITHLCEANLIISILGIVGLATRSLTEQERPPIERIETPIGEFIRIITAKALYYITILMWLQLHGGKSIFGADSKTADIFIFNILLLYHVYNEFRPSNLRPLPASQLLRFIAA 879
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa02g1769 879 Gene3D - 725 791 - -
Bisa02g1769 879 NCBIfam HAD-IC family P-type ATPase 650 759 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Bisa02g1769 879 NCBIfam HAD-IC family P-type ATPase 150 311 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Bisa02g1769 879 Gene3D - 266 412 - -
Bisa02g1769 879 Gene3D - 581 724 IPR023214 -
Bisa02g1769 879 Gene3D - 441 580 IPR023299 GO:0000166
Bisa02g1769 879 ProSitePatterns E1-E2 ATPases phosphorylation site. 395 401 IPR018303 -
Bisa02g1769 879 SUPERFAMILY Calcium ATPase, transduction domain A 183 274 IPR008250 -
Bisa02g1769 879 Pfam E1-E2 ATPase 184 371 - -
Bisa02g1769 879 Gene3D - 184 265 - -
Bisa02g1769 879 SFLD p-type atpase 375 732 IPR044492 -
Bisa02g1769 879 NCBIfam calcium-translocating P-type ATPase, PMCA-type 52 862 IPR006408 GO:0005388|GO:0005524|GO:0016020|GO:0070588
Bisa02g1769 879 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 400 577 IPR023299 GO:0000166
Bisa02g1769 879 Pfam Cation transporter/ATPase, N-terminus 61 130 IPR004014 -
Bisa02g1769 879 SFLD C1.7: P-type atpase like 375 732 - -
Bisa02g1769 879 PRINTS P-type cation-transporting ATPase superfamily signature 679 698 - -
Bisa02g1769 879 PRINTS P-type cation-transporting ATPase superfamily signature 229 243 - -
Bisa02g1769 879 PRINTS P-type cation-transporting ATPase superfamily signature 573 584 - -
Bisa02g1769 879 PRINTS P-type cation-transporting ATPase superfamily signature 595 605 - -
Bisa02g1769 879 PRINTS P-type cation-transporting ATPase superfamily signature 703 715 - -
Bisa02g1769 879 PRINTS P-type cation-transporting ATPase superfamily signature 393 407 - -
Bisa02g1769 879 PANTHER CATION TRANSPORTING ATPASE 44 861 - -
Bisa02g1769 879 FunFam Plasma membrane calcium-transporting ATPase 2 578 724 - -
Bisa02g1769 879 SUPERFAMILY Calcium ATPase, transmembrane domain M 60 860 IPR023298 -
Bisa02g1769 879 PRINTS H+-transporting ATPase (proton pump) signature 679 695 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Bisa02g1769 879 PRINTS H+-transporting ATPase (proton pump) signature 537 555 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Bisa02g1769 879 PRINTS H+-transporting ATPase (proton pump) signature 711 736 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Bisa02g1769 879 Pfam haloacid dehalogenase-like hydrolase 393 693 - -
Bisa02g1769 879 SUPERFAMILY HAD-like 392 780 IPR036412 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa02g1769 Bisa-ChrBisa02 33240365 33243343 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa02g1769 44 865 Primary Pumps ATPases AT3G22910 48.840 0.0 716