Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Bisa02g1764 | ATGCCTTTTGCCACCAATTTGGAGCGAATTGAGGCACTTCTGAATGTCTCCAACAATCTCAGCAAACCAAACCAAAGATGGCACTCTGCTTTTCTCAGCATTTACTGTTGCAAAACCCTCGTGTCTCACTTCAAAACCAATCTGCTTCCCAATAAGAACAAGAAGAAGCCTAGGTTGTCACCTTCTTCCTCCTACACCCTGATCGATTTGAACCCAGATAACTCCTTCAGTGTTACCCAAACCAGCCTTGTTCATCTTGTGAAGGACAAAAATCTGGACACCCTTCAGAAGCTCGGCGGGGTCCACGGTGTGGCTTCTGCTCTCGAAACCAACGTTGAATATGGAATCAAAGGAAGTGACGAGGATGCCAATGACATCACGCGCCGACGTGAAGCGTTTGGTTCCAACACTTACCCCAGACCACCTTCTACAAGCTTCCTCCACTTTGTAATCGAAGCATTTAAGGACCCCACAATTTTAATCCTTTTGGCTTGTGCTGCTCTGTCTCTCGGATTCGGCATCAAAGAGGACGGACTCAAGGAAGGTTGGTATGATGGCGGAAGCATTTTCGTTGCTGTTTTTCTTGTCATTGCCGTGTCTTCCGTTAGTAATTTCAGACAAAATAGGCAGTTTGACAAGCTGTCCCGAGTCAGCAACGACATCCACGTGGATGTCGTAAGAAGCGGCCGACGACAAGAGATTTCAATATACGACGTCGTGGTGGGCGACGTCGTTTGTTTGAAGATCGGAGACCAAGTTCCTGCCGATGGGTTGTTCTTGGAAGGCCATTCTCTGCAAGTGGACGAATCAAGCATGACGGGTGAAAGTGAACATGTCGAAGTTAATAGAAACCACAATCCGTTCTTGTTCTCCGGGACTAAAGTAGCAGATGGGTTCGCGAAAATGCTGGTAACTTGTGTTGGTACGAACACAACATGGGGTCAAATGATGGGTACGATAAGCAAAGACAACAACGAAGAAACCCCCTTGCAAGCACGTCTCAATATGCTCACTTCGGCGATAGGTAAGATTGGTTTGGCTGTGGCTTTTCTGGTTCTCATTGTTTTGTTGATTCGTTACTTCACTGGGAACACCAAAGATGAGAATGGAAGCAAAGAGTTCAACGGGAGTAACACAAAGTTTGATGACATTGTGAATGGAGTTGTGGGGATCGTAGCTGCTGCTGTTACTATTGTTGTGGTTGCGATTCCAGAAGGGCTTCCATTGGCTGTGACACTAACTCTGGCATACTCAATGAAGAAGATGATGGCCGATCAAGCAATGGTGAGGAAGCTCTCTGCTTGCGAGACAATGGGATCTGCCACGACTATTTGTACTGACAAGACAGGGACGCTTACGCTCAACCAAATGAAAGTGACCAAGTTCTGGCTTGGACAACAACCTATGGCAAAGGAAGCTTGCAAATCATCAGTTGATTCATCTGTTCTTCAACTAATCAAAGAAGGGGTCTCTCTTAACACGACAGGTAGTGTTTACAAGTCGAAATCATTAGATTCTAAATACGAATTTTCAGGTAGTCCAACGGAAAAAGCCATTCTTTCTTGGGCTGTTCTTGATTTGGAGATGGACATGGAGGAATTGACCCGAAACTGCACTATCCTCCATGTGGAGGCCTTCAATTCAAAGAAGAAAAGAAGTGGGGTTTTGATAAGAAGAAAAGTGGACAACAAAAAACATGTACATTGGAAAGGAGCAGCTGAGATGATACTAAGAATGTGTTCAAGGTACTGTGATGCCTCTGGTAATATAAAAGATCTTGACAATAGTACTAAGTTGGTGTTTGAGCATATCATTCAGGGAATGGCAGCTGGCAGCCTCAGGTGCATTGCTTTGGCTTATACAGAAGTTACAGAAGGTGAAGAAGGAGATAATAAAAAGGTAAGAGAAGAAGGCCTCACACTCTTAGGACTAGTGGGTATCAAAGATCCATGTCGTCCAGGGGTGAAGAAAGCAGTCCAAGATTGCCAACGAGCAGGAGTAAACATCAAAATGATCACAGGAGACAATGTTTTCACTGCAAAAGCCATAGCCACAGAATGCGGTATCCTCAGGCCTGATCAGGACACAACAGGAGCAGTAATCGAAGGCGAGGAGTTTCGCAACTGGTCACCCGAAGAAAGATTAGAGAAAGTGGAGAAAATATGTGTGATGGCGCGATCGTCTCCCTTTGACAAGCTTCTAATGGTTCAATGCCTCAAACAAAAAGGCCATGTTGTTGCAGTCACAGGAGATGGAACAAATGATGCACCAGCATTGAAGGAAGCCGACATAGGACTTTCCATGGGGATTCAAGGCACTGAAGTGGCAAAAGAAAGCTCAGATATAGTTATCTTGGACGATAATTTCGCCTCAGTGGCCACAGTTTTAAGGTGGGGAAGATGTGTATACAACAATATCCAGAAGTTCATTCAGTTTCAGTTGACAGTGAACGTTGCTGCACTTGCAATTAACTTTGTGGCTGCAGTATCAGCAGGAAAAGTGCCATTAACAGCAGTTCAACTATTATGGGTGAACCTGATAATGGACACTCTGGGGGCTTTGGCTCTAGCAACAGAGAAGCCTACAATGGAGTTGATGGAGAAAGACCCAGTGGGTAGAACCGAGCCTCTCATCACCAACATCATGTGGAGAAACCTACTAGCCCAAGCTTTATACCAGATAGCGATTCTTCTGACATTGCAATTCAAGGGTGAAGCTATATTTGGGGTGAGTGCAAAGGTAAAAGACACTTTGATCTTTAACACCTTCGTGCTTTGTCAAGTGTTCAATGAGTTCAATGCAAGGAAGCTAGAGAAGAAGAATGTGTTCAAGGGGATTCACAGAAACAAGCTGTTTGTGGGGATCATAGGGATAACCATTGTGCTTCAGGTGGTGATGGTGGAGTTCTTGAAGAAATTTGCAGATACAGAGAGGTTGAATTTGGGGCAGTGGGGTGCTTGCATTATAATTGCAGCTATTGCTTGGCCTCTTGGTTGGGTTGTGAAGTTCATTCCTGTTCCACAAAAACCATTGCTCAGTTTTCTGAACATGAAGAAGTAA | 3060 | 0.4474 | MPFATNLERIEALLNVSNNLSKPNQRWHSAFLSIYCCKTLVSHFKTNLLPNKNKKKPRLSPSSSYTLIDLNPDNSFSVTQTSLVHLVKDKNLDTLQKLGGVHGVASALETNVEYGIKGSDEDANDITRRREAFGSNTYPRPPSTSFLHFVIEAFKDPTILILLACAALSLGFGIKEDGLKEGWYDGGSIFVAVFLVIAVSSVSNFRQNRQFDKLSRVSNDIHVDVVRSGRRQEISIYDVVVGDVVCLKIGDQVPADGLFLEGHSLQVDESSMTGESEHVEVNRNHNPFLFSGTKVADGFAKMLVTCVGTNTTWGQMMGTISKDNNEETPLQARLNMLTSAIGKIGLAVAFLVLIVLLIRYFTGNTKDENGSKEFNGSNTKFDDIVNGVVGIVAAAVTIVVVAIPEGLPLAVTLTLAYSMKKMMADQAMVRKLSACETMGSATTICTDKTGTLTLNQMKVTKFWLGQQPMAKEACKSSVDSSVLQLIKEGVSLNTTGSVYKSKSLDSKYEFSGSPTEKAILSWAVLDLEMDMEELTRNCTILHVEAFNSKKKRSGVLIRRKVDNKKHVHWKGAAEMILRMCSRYCDASGNIKDLDNSTKLVFEHIIQGMAAGSLRCIALAYTEVTEGEEGDNKKVREEGLTLLGLVGIKDPCRPGVKKAVQDCQRAGVNIKMITGDNVFTAKAIATECGILRPDQDTTGAVIEGEEFRNWSPEERLEKVEKICVMARSSPFDKLLMVQCLKQKGHVVAVTGDGTNDAPALKEADIGLSMGIQGTEVAKESSDIVILDDNFASVATVLRWGRCVYNNIQKFIQFQLTVNVAALAINFVAAVSAGKVPLTAVQLLWVNLIMDTLGALALATEKPTMELMEKDPVGRTEPLITNIMWRNLLAQALYQIAILLTLQFKGEAIFGVSAKVKDTLIFNTFVLCQVFNEFNARKLEKKNVFKGIHRNKLFVGIIGITIVLQVVMVEFLKKFADTERLNLGQWGACIIIAAIAWPLGWVVKFIPVPQKPLLSFLNMKK | 1019 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Bisa02g1764 | 1019 | Gene3D | - | 442 | 794 | IPR023214 | - | |
| Bisa02g1764 | 1019 | SUPERFAMILY | Metal cation-transporting ATPase, ATP-binding domain N | 451 | 655 | IPR023299 | GO:0000166 | |
| Bisa02g1764 | 1019 | Pfam | haloacid dehalogenase-like hydrolase | 442 | 763 | - | - | |
| Bisa02g1764 | 1019 | FunFam | Calcium-transporting ATPase | 455 | 650 | - | - | |
| Bisa02g1764 | 1019 | Pfam | Cation transporter/ATPase, N-terminus | 98 | 169 | IPR004014 | - | |
| Bisa02g1764 | 1019 | FunFam | Calcium-transporting ATPase | 766 | 1008 | - | - | |
| Bisa02g1764 | 1019 | Pfam | E1-E2 ATPase | 221 | 423 | - | - | |
| Bisa02g1764 | 1019 | NCBIfam | calcium-translocating P-type ATPase, PMCA-type | 90 | 1006 | IPR006408 | GO:0005388|GO:0005524|GO:0016020|GO:0070588 | |
| Bisa02g1764 | 1019 | ProSitePatterns | E1-E2 ATPases phosphorylation site. | 447 | 453 | IPR018303 | - | |
| Bisa02g1764 | 1019 | Gene3D | - | 455 | 650 | IPR023299 | GO:0000166 | |
| Bisa02g1764 | 1019 | FunFam | Calcium-transporting ATPase | 644 | 794 | - | - | |
| Bisa02g1764 | 1019 | PANTHER | CATION TRANSPORTING ATPASE | 63 | 1006 | - | - | |
| Bisa02g1764 | 1019 | NCBIfam | HAD-IC family P-type ATPase | 386 | 475 | IPR001757 | GO:0005215|GO:0005524|GO:0016020|GO:0016887 | |
| Bisa02g1764 | 1019 | NCBIfam | HAD-IC family P-type ATPase | 722 | 830 | IPR001757 | GO:0005215|GO:0005524|GO:0016020|GO:0016887 | |
| Bisa02g1764 | 1019 | NCBIfam | HAD-IC family P-type ATPase | 189 | 360 | IPR001757 | GO:0005215|GO:0005524|GO:0016020|GO:0016887 | |
| Bisa02g1764 | 1019 | SUPERFAMILY | Calcium ATPase, transduction domain A | 221 | 319 | IPR008250 | - | |
| Bisa02g1764 | 1019 | CDD | P-type_ATPase_Ca_PMCA-like | 126 | 882 | - | - | |
| Bisa02g1764 | 1019 | PRINTS | H+-transporting ATPase (proton pump) signature | 749 | 765 | IPR001757 | GO:0005215|GO:0005524|GO:0016020|GO:0016887 | |
| Bisa02g1764 | 1019 | PRINTS | H+-transporting ATPase (proton pump) signature | 601 | 619 | IPR001757 | GO:0005215|GO:0005524|GO:0016020|GO:0016887 | |
| Bisa02g1764 | 1019 | PRINTS | H+-transporting ATPase (proton pump) signature | 781 | 806 | IPR001757 | GO:0005215|GO:0005524|GO:0016020|GO:0016887 | |
| Bisa02g1764 | 1019 | SFLD | C1.7: P-type atpase like | 427 | 802 | - | - | |
| Bisa02g1764 | 1019 | Gene3D | - | 124 | 321 | - | - | |
| Bisa02g1764 | 1019 | FunFam | Calcium-transporting ATPase | 194 | 321 | - | - | |
| Bisa02g1764 | 1019 | SFLD | p-type atpase | 427 | 802 | IPR044492 | - | |
| Bisa02g1764 | 1019 | PRINTS | P-type cation-transporting ATPase superfamily signature | 643 | 654 | - | - | |
| Bisa02g1764 | 1019 | PRINTS | P-type cation-transporting ATPase superfamily signature | 665 | 675 | - | - | |
| Bisa02g1764 | 1019 | PRINTS | P-type cation-transporting ATPase superfamily signature | 445 | 459 | - | - | |
| Bisa02g1764 | 1019 | PRINTS | P-type cation-transporting ATPase superfamily signature | 773 | 785 | - | - | |
| Bisa02g1764 | 1019 | PRINTS | P-type cation-transporting ATPase superfamily signature | 749 | 768 | - | - | |
| Bisa02g1764 | 1019 | PRINTS | P-type cation-transporting ATPase superfamily signature | 268 | 282 | - | - | |
| Bisa02g1764 | 1019 | Gene3D | - | 152 | 1004 | - | - | |
| Bisa02g1764 | 1019 | SUPERFAMILY | Calcium ATPase, transmembrane domain M | 99 | 1006 | IPR023298 | - | |
| Bisa02g1764 | 1019 | SUPERFAMILY | HAD-like | 443 | 854 | IPR036412 | - | |
| Bisa02g1764 | 1019 | SMART | Cation_ATPase_N_a_2 | 100 | 174 | IPR004014 | - | |
| Bisa02g1764 | 1019 | Pfam | Cation transporting ATPase, C-terminus | 834 | 1004 | IPR006068 | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Bisa02g1764 | Bisa-ChrBisa02 | 33153242 | 33156301 | Proximal |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Bisa02g1764 | 10 | 1019 | Primary Pumps ATPases | AT3G22910 | 70.403 | 0.0 | 1360 |