Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa02g1762 ATGCCTATTTCTTTTGCCACCAGTTTGGAGCAAATTGAGGCACTTCTGAATGTCTCAAACAACCTCAACAAACCAAACCAAAGATGGCACTCTGCTTTTCTCAGCATTTACTGTTGCAGAACCCTCGTGTCTCACTTCAAAGCCAATCTGCTTCCCAATAAGAACAAGAAGAACCCAAAGTTGTCACCTTCTTCCTCCTACACCCTGATCGATTTGAACCCAGATAAATCCTTCAGTGTTACCCAAACCAGCCTTGTCCATCTTGTGAAGGACAAAAGTCTGAACGCCCTTCAGAAGCTCGGTGGTGTCCACGGTGTGGCTTCTGCTCTCGAAACCAACGTTGAATATGGAATCAAAGGAAGTGACGAGGATGCCAGTGACATCACGCGCCGACATGAAGCGTTTGGTTCCAACACTTACCCCAGACCACCTTCTACAGGCTTCCTCCACTTTGTAATCGAAGCATTTAAGGACCCCACAATTTTAATCCTTTTGGCTTGTGCTGCTCTGTCTCTCGGATTCGGCATCAAAGAGAATGGACTCAAGGAAGGTTGGTATGATGGAGGAAGCATTTTCGTTGCTGTTTTTCTTGTCATTGCCGTGTCTTCCGTTAGTAATTTCAGACAAAATAGGCAGTTTGACAAGCTGTCCCGAGTCAGCAACGACATCCACGTGGATGTCGTAAGAAGCGGCCGACGACAAGAGATTTCAATATACGACGTCGTGGTGGGCGACGTCGTTTGTTTGAAGATCGGAGACCAAGTTCCTGCCGATGGGTTGTTCTTGGAAGGCCATTCTCTGCAAGTGGACGAATCAAGCATGACGGGTGAAAGTGAACATGTCGAAGTTAATAGAAACCACAATCCGTTCTTGTTCTCCGGGACTAAAGTAGCAGATGGGTTCGCGAAAATGCTGGTAACTTGTGTTGGTACGAACACAACATGGGGTCAAATGATGGGTACGATAAGCAAAGACAACAACGAAGAAACCCCCTTGCAAGCACGTCTCAATATGCTCACTTCGGCGATAGGTAAGATTGGTTTGGCTGTGGCTTTTCTGGTTCTCATTGTTTTGTTGATTCGTTACTTCACTGGGAACACCAAAGATGAGAATGGAAGCAAAGAGTTCAACGGGAGTAACACAAAGTTTGATGACATTGTGAATGGAGTTGTGGGGATCGTAGCTGCTGCTGTTACTATTGTTGTGGTTGCGATTCCAGAAGGGCTTCCATTGGCTGTGACACTAACTCTGGCATACTCAATGAAGAAGATGATGGCCGATCAAGCTATGGTGAGGAAGCTCTCTGCTTGCGAGACAATGGGATCTGCCACGACTATTTGTACTGACAAGACAGGGACGCTTACGCTCAACCAAATGAAAGTGACCAAGTTCTGGCTTGGACAACAACCTATGGCAAAGGAAGCTTGCAAATCATCAGTTGATTCATCTGTTCTTCAACTAATCAAAGAAGGGGTCTCTCTTAACACGACAGGTAGTGTTTACAAGTCGAAATCATTAGATTCTCAATACGAATTTTCAGGTAGTCCAACGGAAAAAGCCATTCTTTCTTGGGCTGTTCTTGATTTGGAGATGGACATGGAGGAATTGACCCGAAACTGCACTATCCTCCATGTGGAGGCCTTCAATTCAAAGAAGAAAAGAAGTGGGGTTTTGATAAGAAGAAAAGTGGACAACAAAAAACATGTACATTGGAAAGGAGCAGCTGAGATGATACTAAGAATGTGTTCAAGGTACTGTGATGCCTCTGGTAATATAAAAGATCTTGACAATAGTACTAAGTTGGTGTTTGAGCATATCATTCAGGGAATGGCAGCTGGCAGCCTCAGGTGCATTGCTTTGGCTTATACAGAAGTTACAGAAGGTGAAGAAGGAGATAATAACAAGGTAAGAGAAGAAGGCCTCACACTCTTAGGACTAGTGGGTATCAAAGATCCATGTCGTCCAGGGGTGAAGAAAGCAGTCCAAGATTGCCAACGAGCAGGAGTAAACATCAAAATGATCACAGGAGACAATGTTTTCACTGCAAAAGCCATAGCCACAGAATGCGGTATCCTCAGGCCTGATCAGGACACAACAGGAGCAGTAATCGAAGGCGAGGAGTTTCGCAACTGGTCACCCGAAGAAAGACTACAGAAAGTGGAGAAAATATGTGTGATGGCGCGATCGTCTCCCTTTGACAAGCTTCTAATGGTTCAATGCCTCAAACAAAAAGGCCATGTTGTTGCAGTCACAGGAGATGGAACAAATGATGCACCAGCATTGAAGGAAGCCGACATAGGACTTTCCATGGGGATTCAAGGCACTGAAGTGGCAAAAGAAAGCTCAGATATAGTTATCTTGGACGATAATTTCGCCTCAGTGGCCACAGTTTTAAGGTGGGGAAGATGTGTATACAACAATATCCAGAAGTTCATTCAGTTTCAGTTGACAGTGAACGTTGCTGCACTTGCAATTAACTTTGTGGCTGCAGTATCAGCAGGAAAAGTGCCATTAACAGCAGTTCAACTATTATGGGTGAACCTGATAATGGACACTCTGGGGGCTTTGGCTCTAGCAACAGAGAAGCCTACAATGGAGTTGATGGGGAAAGACCCAGTGGGCAGAACCGAGCCCCTCATCACCAACATCATGTGGAGAAACCTACTAGCCCAAGCTTTATACCAGATAGCGATTCTTCTGACACTGCAATTCAAGGGTGAAGCTATATTTGGGGTGAGTGCAAAGGTAAAAGACACTTTGATCTTTAACACCTTCGTGCTTTGTCAAGTGTTCAATGAGTTCAATGCAAGGAAGCTAGAGAAGAAGAATGTGTTCAAGGGGATTCACAGAAACAAGCTGTTTGTGGGGATCATAGGGATAACCATTGTGCTTCAGGTGGTGATGGTGGAGTTTTTGAAGAAATTTGCAGATACAGAGAGGTTGAATTTGGGGCAGTGGGGTGCTTGCATTATAATTGCAGCTATTGCTTGGCCTCTTGGTTGGGTTGTGAAGTTCATTCCTGTTCCACAAAAACCATTGCTCAGTTTTCTGAACATGAAGAAGTAA 3066 0.4478 MPISFATSLEQIEALLNVSNNLNKPNQRWHSAFLSIYCCRTLVSHFKANLLPNKNKKNPKLSPSSSYTLIDLNPDKSFSVTQTSLVHLVKDKSLNALQKLGGVHGVASALETNVEYGIKGSDEDASDITRRHEAFGSNTYPRPPSTGFLHFVIEAFKDPTILILLACAALSLGFGIKENGLKEGWYDGGSIFVAVFLVIAVSSVSNFRQNRQFDKLSRVSNDIHVDVVRSGRRQEISIYDVVVGDVVCLKIGDQVPADGLFLEGHSLQVDESSMTGESEHVEVNRNHNPFLFSGTKVADGFAKMLVTCVGTNTTWGQMMGTISKDNNEETPLQARLNMLTSAIGKIGLAVAFLVLIVLLIRYFTGNTKDENGSKEFNGSNTKFDDIVNGVVGIVAAAVTIVVVAIPEGLPLAVTLTLAYSMKKMMADQAMVRKLSACETMGSATTICTDKTGTLTLNQMKVTKFWLGQQPMAKEACKSSVDSSVLQLIKEGVSLNTTGSVYKSKSLDSQYEFSGSPTEKAILSWAVLDLEMDMEELTRNCTILHVEAFNSKKKRSGVLIRRKVDNKKHVHWKGAAEMILRMCSRYCDASGNIKDLDNSTKLVFEHIIQGMAAGSLRCIALAYTEVTEGEEGDNNKVREEGLTLLGLVGIKDPCRPGVKKAVQDCQRAGVNIKMITGDNVFTAKAIATECGILRPDQDTTGAVIEGEEFRNWSPEERLQKVEKICVMARSSPFDKLLMVQCLKQKGHVVAVTGDGTNDAPALKEADIGLSMGIQGTEVAKESSDIVILDDNFASVATVLRWGRCVYNNIQKFIQFQLTVNVAALAINFVAAVSAGKVPLTAVQLLWVNLIMDTLGALALATEKPTMELMGKDPVGRTEPLITNIMWRNLLAQALYQIAILLTLQFKGEAIFGVSAKVKDTLIFNTFVLCQVFNEFNARKLEKKNVFKGIHRNKLFVGIIGITIVLQVVMVEFLKKFADTERLNLGQWGACIIIAAIAWPLGWVVKFIPVPQKPLLSFLNMKK 1021
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa02g1762 1021 FunFam Calcium-transporting ATPase 196 323 - -
Bisa02g1762 1021 FunFam Calcium-transporting ATPase 646 796 - -
Bisa02g1762 1021 Pfam Cation transporting ATPase, C-terminus 836 1006 IPR006068 -
Bisa02g1762 1021 SUPERFAMILY Calcium ATPase, transmembrane domain M 101 1008 IPR023298 -
Bisa02g1762 1021 Gene3D - 126 323 - -
Bisa02g1762 1021 PRINTS P-type cation-transporting ATPase superfamily signature 667 677 - -
Bisa02g1762 1021 PRINTS P-type cation-transporting ATPase superfamily signature 447 461 - -
Bisa02g1762 1021 PRINTS P-type cation-transporting ATPase superfamily signature 751 770 - -
Bisa02g1762 1021 PRINTS P-type cation-transporting ATPase superfamily signature 775 787 - -
Bisa02g1762 1021 PRINTS P-type cation-transporting ATPase superfamily signature 270 284 - -
Bisa02g1762 1021 PRINTS P-type cation-transporting ATPase superfamily signature 645 656 - -
Bisa02g1762 1021 Pfam haloacid dehalogenase-like hydrolase 444 765 - -
Bisa02g1762 1021 PRINTS H+-transporting ATPase (proton pump) signature 603 621 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Bisa02g1762 1021 PRINTS H+-transporting ATPase (proton pump) signature 751 767 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Bisa02g1762 1021 PRINTS H+-transporting ATPase (proton pump) signature 783 808 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Bisa02g1762 1021 ProSitePatterns E1-E2 ATPases phosphorylation site. 449 455 IPR018303 -
Bisa02g1762 1021 SUPERFAMILY Calcium ATPase, transduction domain A 223 321 IPR008250 -
Bisa02g1762 1021 SFLD C1.7: P-type atpase like 429 804 - -
Bisa02g1762 1021 SUPERFAMILY HAD-like 445 856 IPR036412 -
Bisa02g1762 1021 Gene3D - 457 652 IPR023299 GO:0000166
Bisa02g1762 1021 NCBIfam HAD-IC family P-type ATPase 724 832 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Bisa02g1762 1021 NCBIfam HAD-IC family P-type ATPase 388 477 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Bisa02g1762 1021 NCBIfam HAD-IC family P-type ATPase 191 362 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Bisa02g1762 1021 SMART Cation_ATPase_N_a_2 102 176 IPR004014 -
Bisa02g1762 1021 SFLD p-type atpase 429 804 IPR044492 -
Bisa02g1762 1021 FunFam Calcium-transporting ATPase 768 1010 - -
Bisa02g1762 1021 Pfam E1-E2 ATPase 223 425 - -
Bisa02g1762 1021 CDD P-type_ATPase_Ca_PMCA-like 128 884 - -
Bisa02g1762 1021 Gene3D - 444 796 IPR023214 -
Bisa02g1762 1021 NCBIfam calcium-translocating P-type ATPase, PMCA-type 92 1008 IPR006408 GO:0005388|GO:0005524|GO:0016020|GO:0070588
Bisa02g1762 1021 Gene3D - 154 1006 - -
Bisa02g1762 1021 FunFam Calcium-transporting ATPase 457 652 - -
Bisa02g1762 1021 PANTHER CATION TRANSPORTING ATPASE 65 1008 - -
Bisa02g1762 1021 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 453 657 IPR023299 GO:0000166
Bisa02g1762 1021 Pfam Cation transporter/ATPase, N-terminus 100 171 IPR004014 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa02g1762 Bisa-ChrBisa02 33127906 33130971 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa02g1762 12 1021 Primary Pumps ATPases AT3G22910 70.010 0.0 1353