Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa02g1756 ATGCCAGTGAGACAGATGAAAGAAAGCTCAGAGCAGCATCTTGTGATCAAAGCACACTTGCAAAACTCCATGAATCCAGCGAAGAAGGCACCCAAAACTGTCCAAAATGGCAAAGGTCCACAGTCACAAGAACCCCACAACGCCAAATCCCATAATAGTCAACCTTCGCCTCAGGCAAAGAACAGAGGAAGAAGAAGGAGCCGAGGAGGCCGAAAGTCCGATCAAGGCGATGTTCCGATGCGACCCACTTGCCGACCCTGCACGGTGGCGAATAAACCGCTATCATCTAACCCGGGTCAGATTATGCTGTCACATACTGCAAACGGGTCTGTTGAAAAGGGCGGCAACAACTGTGTTGTAGCGATGGGATTTCCTACTTCAAGCAAATCTTTGAGCTTCGCTCCTAGGCCTGGATACGGACAAGTTGGGACAAAATGCATAGTGAAGGCTAACCATTTCTTTGCAGAGTTACCGGACAAGGACTTGAACCAGTATGATGTCACTATTACCCCTGAAGTATCGTCTAGATCAGTTAACAGGGCCATCATGGCAGAACTTGTGAGACTGTATAAAGAGTCTGACTTGGGGATGAGACTTCCTGCATATGATGGCAGAAAAGGTCTGTACACAGCAGGGGAGCTTCCCTTTGCTTGGAGAGAGTTTAAAATTAAGCTTGTTGATGAAGAGGATGGAGTTAATGGTCCCAAAAGGGAAAGAGAATACAGAGTGGTGATCAAGTTTGTTGCTCGGGCAAACTTGCATCACTTAGGGCAGTTTCTAGCTGGTAAGCGTGCTGATGCTCCACAAGAGGCACTTCAGATTCTTGACATTGTCCTGAGAGAGCTATCAACTAAGAGGTTTTGCCCCATAGGGAGGTCTTTCTTTTCACCTGATATTAGAACACCACAACGGCTTGGAGAGGGACTGGAGTCATGGTGTGGATTCTACCAGAGCATAAGGCCTACTCAGATGGGCCTTTCGCTCAACATTGATATGGCTTCTGCTGCGTTTATTGAGCCTCTTCCAGTAGTGGAGTTTGTTGGCCAGCTATTAGGAAAAGATGTGTTGTCAAGGCCATTGTCTGATGCAGATCGTGTAAAGATTAAAAAAGCCCTCAGAGGAGTTAAAGTTGAAGTAACACACAGAGGGAGTGTACGAAGAAAATATCGTGTTTCAGGATTAACATCTCAACCTACAAGAGAACTTGTGTTTCCCGTTGATGACAATTCAACTATGAAATCAGTTGTTGAGTATTTCCAAGAGATGTATGGTTTCACCATTCAGTATACTCACCTTCCTTGCCTTCAAGTAGGAAACCAAAAGAAGGCTAACTATTTGCCTATGGAGGCATGCAAAATTGTCGAGGGGCAACGCTATACAAAAAGGCTGAATGAGAAGCAAATTACTGCTTTGCTGAAAGTTACTTGCCAGAGACCTCGTGATCGAGAAAATGACATTTTGCGGACAATTCAACATAATGCTTATGATCAAGATCCTTATGCCAATGAGTTCGGGATTAAGATCAGTGAAAAACTAGCTTCTGTTGAAGCACGAATTCTTCCTGCTCCTTGGCTGAAATATCATGACACTGGGAAAGAAAAGAACTGTTTACCCCAAGTTGGTCAGTGGAATATGATGAACAAGAAAATGATTAATGGGATGACTGTCAGCCGGTGGGCATGCATAAATTTTTCGCGGAATGTGCAAGATAGTGTTGCTCGCAGTTTTTGTAGTGAACTTGCTCAAATGTGTCAAGTATCTGGCATGGAATTTAATCCAGATCCTGTTATCCCAATATACAATGCAAAGCCTGAGCAGGTGGAGAAAGCATTAAAGCATGTTTATCATGTGTCGATGAACAAAACTAAAGGAAAGGAATTAGAGCTTCTATTAGCAATATTGCCTGACAACAATGGGTCTCTATATGGTGATCTCAAGCGTATTTGTGAAACCGACCTTGGTTTAATTTCGCAGTGCTGCCTGACAAAGCATGTCTTTAAGATCACTAAACAGTATTTGGCTAATGTGTCTCTGAAGATCAATGTGAAGATGGGAGGTAGAAACACCGTACTTCTTGATGCTATAAGCTGCAGAATACCATTGGTTAGTGACATTCCAACCATAATATTTGGAGCAGATGTTACACACCCTGAAAATGGAGAAGACTCCAGTCCCTCGATAGCAGCTGTAGTAGCTTCCCAAGACTGGCCTGAAGTGACAAAATATGCCGGTTTAGTGTGTGCTCAAGCTCACAGACAGGAACTTATTCAAGATTTGTATAAAACTTGGCATGACCCTGTTCGTGGCACAGTCAGTGGTGGCATGATCCGAGACTTGTTGGTCTCTTTTAGAAAGGCAACAGGACAGAAGCCACTAAGGATTATATTTTACAGGGACGGTGTAAGTGAAGGGCAATTTTATCAAGTTCTACTTTATGAGTTGGATGCAATCCGGAAGGCATGTGCTTCTTTAGAGCCAAACTATCAGCCTCCAGTAACTTTTATTGTTGTACAAAAAAGACATCATACTAGGTTGTTTGCAAACAACCACAGAGACAAGAGCAGCACTGATAAGAGTGGGAATATATTGCCTGGGACTGTTGTTGATTCTAAAATTTGTCATCCAACAGAATTTGATTTTTATCTCTGCAGTCATGCTGGAATCCAGGGGACGAGTCGGCCAGCTCATTATCATGTTCTATGGGATGAGAACAACTTTACAGCGGATGGAATTCAGTCCTTGACAAACAATCTGTGTTATACATATGCTAGGTGTACACGCTCTGTATCTGTTGTTCCTCCAGCATATTATGCACATCTAGCAGCATTTCGGGCCCGATTCTATATGGAGCCAGAAATGCAGGAGAATGGCTCTGCCGGCGGGGGCAGTGCGGGACATGGTTCCAAAGGAATGCGAGCAGCGGGAGAGTGCGGAGTCCGGCCTTTGCCAGCCTTGAAAGAAAATGTGAAGAGAGTAATGTTTTATTGTTAG 2991 0.439 MPVRQMKESSEQHLVIKAHLQNSMNPAKKAPKTVQNGKGPQSQEPHNAKSHNSQPSPQAKNRGRRRSRGGRKSDQGDVPMRPTCRPCTVANKPLSSNPGQIMLSHTANGSVEKGGNNCVVAMGFPTSSKSLSFAPRPGYGQVGTKCIVKANHFFAELPDKDLNQYDVTITPEVSSRSVNRAIMAELVRLYKESDLGMRLPAYDGRKGLYTAGELPFAWREFKIKLVDEEDGVNGPKREREYRVVIKFVARANLHHLGQFLAGKRADAPQEALQILDIVLRELSTKRFCPIGRSFFSPDIRTPQRLGEGLESWCGFYQSIRPTQMGLSLNIDMASAAFIEPLPVVEFVGQLLGKDVLSRPLSDADRVKIKKALRGVKVEVTHRGSVRRKYRVSGLTSQPTRELVFPVDDNSTMKSVVEYFQEMYGFTIQYTHLPCLQVGNQKKANYLPMEACKIVEGQRYTKRLNEKQITALLKVTCQRPRDRENDILRTIQHNAYDQDPYANEFGIKISEKLASVEARILPAPWLKYHDTGKEKNCLPQVGQWNMMNKKMINGMTVSRWACINFSRNVQDSVARSFCSELAQMCQVSGMEFNPDPVIPIYNAKPEQVEKALKHVYHVSMNKTKGKELELLLAILPDNNGSLYGDLKRICETDLGLISQCCLTKHVFKITKQYLANVSLKINVKMGGRNTVLLDAISCRIPLVSDIPTIIFGADVTHPENGEDSSPSIAAVVASQDWPEVTKYAGLVCAQAHRQELIQDLYKTWHDPVRGTVSGGMIRDLLVSFRKATGQKPLRIIFYRDGVSEGQFYQVLLYELDAIRKACASLEPNYQPPVTFIVVQKRHHTRLFANNHRDKSSTDKSGNILPGTVVDSKICHPTEFDFYLCSHAGIQGTSRPAHYHVLWDENNFTADGIQSLTNNLCYTYARCTRSVSVVPPAYYAHLAAFRARFYMEPEMQENGSAGGGSAGHGSKGMRAAGECGVRPLPALKENVKRVMFYC 996
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa02g1756 996 FunFam Argonaute 10 519 692 - -
Bisa02g1756 996 MobiDBLite consensus disorder prediction 26 60 - -
Bisa02g1756 996 Pfam Mid domain of argonaute 538 615 IPR032473 -
Bisa02g1756 996 Gene3D paz domain 334 459 - -
Bisa02g1756 996 SMART DUF1785_2 288 340 IPR014811 -
Bisa02g1756 996 SUPERFAMILY PAZ domain 335 495 IPR036085 GO:0005515
Bisa02g1756 996 CDD Piwi_ago-like 499 949 IPR045246 -
Bisa02g1756 996 SMART Piwi_a_2 629 950 IPR003165 GO:0003676
Bisa02g1756 996 ProSiteProfiles Piwi domain profile. 629 950 IPR003165 GO:0003676
Bisa02g1756 996 Gene3D - 519 692 - -
Bisa02g1756 996 SMART PAZ_2_a_3 345 477 IPR003100 GO:0005515
Bisa02g1756 996 Pfam N-terminal domain of argonaute 145 279 IPR032474 -
Bisa02g1756 996 FunFam protein argonaute 10-like 698 996 - -
Bisa02g1756 996 CDD PAZ_argonaute_like 340 454 - -
Bisa02g1756 996 Gene3D - 698 996 IPR036397 GO:0003676
Bisa02g1756 996 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 2C 123 950 - -
Bisa02g1756 996 Pfam PAZ domain 367 471 IPR003100 GO:0005515
Bisa02g1756 996 Pfam Argonaute linker 2 domain 481 527 IPR032472 -
Bisa02g1756 996 Pfam Piwi domain 630 949 IPR003165 GO:0003676
Bisa02g1756 996 Pfam Argonaute linker 1 domain 289 338 IPR014811 -
Bisa02g1756 996 ProSiteProfiles PAZ domain profile. 341 455 IPR003100 GO:0005515
Bisa02g1756 996 MobiDBLite consensus disorder prediction 1 99 - -
Bisa02g1756 996 FunFam Protein argonaute-2 334 460 - -
Bisa02g1756 996 SUPERFAMILY Ribonuclease H-like 619 950 IPR012337 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa02g1756 Bisa-ChrBisa02 32872451 32884260 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa02g1756 1 996 Eukaryotic Initiation Factors Gene Family AT5G43810 81.755 0.0 1675