Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa02g1754 ATGAAACTTCTTCAGTCTGAGGAAACCGCTTCCGAGGCCTGCGACTTTCCTGAGGAAGCCGAAGAAGAGAAGCGCCCCAGCACTTCTCTGGTTGAAGGCGATGATCGTGGCGTTGATAATGGGGATGCGGTTCTCGACGTCTGTGGAAAAACCGTGGAGTTTCCGGTATTGGAGAATGCTGAAGATTTTGTGGAGGGTTTGTATTTTTATAAGAATGTTTACAATTTAATCCCCAAGTCTCTGGGTGGTTTTGAACGGTTGAGGACGTTGAAGTTCTTTGGAAACGAGATTAATTTGTTTGCCCCCGAGTTTGGGAACTTGACGGGGTTGGAGTGCTTGCAGATGAAGATATCATCACCGGGAATTGGTGGGTTGCCATTGCATAAGTTGAAGGGTTTGAAAGAGCTTGAGCTGTCCAAAGTGCCTCCCCGGCCCTCTGCCTTCCCTATATTGACCGAGATTTCAGGTCTTAAGTGCTTGACCAAGCTTTCGATTTGCCACTTCTCTATTAGATACCTTCCTCCTGAAATTGGCTGCTTAAAGAAACTGGAGTATCTTGATCTTTCATTCAATAAGATGAAGACATTGCCCTCTGAAATCAGTTTTTTGAATGACTTGATATCTTTGAAAGTTTCCAATAATAAGTTGGTCGAACTACCATCAACTATTGCCTCTCTGTCAAGGCTGGAGAACTTGGATCTGTCAAATAATAGGTTGACTTCATTGGGACGTCTTGATCTTGGGTCTATGCATAAACTTCGGAGTTTAAATCTTCAGTACAATAAGCTGCTCAATATATTCCAAATACCTTCATGGATTTGCTGTAATATGGAAGGGAATGACAAAGGCGAATGCAGTGATGATTTTAGCAGTTCTTCTGTTGAAATGGATGTGTATGAATCTAGTTTACAGGAGAATGATGGAATCCTTTCTCATGGTTCTCATAACACCTCATCAAGCCTGTTGACTAGCTCCACATCTAGCAGTAGGTGTTTTGCAGACCGAAAGTCAGGTAAACGGTGGAAGCGGCGGCATTATTTACAGCAGAAAGCCCGTCAAGAATGCTTAAATAACAGCAGGAAGTGGAAAGGTTTAGATAATTCTCAGTTGCTAAGTAAGAAGATTCATAGAATTTGCGAACCAGAAAAACTGGACAGTGTTGCTCCTGAAAACTCTGGAGAAACTGTATCGGACAATGTGAATCTGGATGATGATGCTAAAAAGTTATTCTCTGAAGAAGCAGGGAATGATAATGTAATTGATCATGTTAAAAATAACGAAGTGGGTATTGAAAATCAGTTTTCTAAAGAAGATAGCTGCTCTAGTGAAAGTAAAGATGAAAAAGATGCTTCCTTATACCCCTCAGAGAATGGGCCAAATGAGCAGAACAAAGCATCTAATTCTGAAAATTTTAAATGTGTTTCCAAATCAAAGAGGCATTCAGATAGGGATCTTGATAATCCTAAACCATGCAAGTCCAGAAAACCAATTGGTGATAGCTCGTTGTTGTCCTCCAAGTACAGTAGCTTATCATTTTGTGGCATTGAAGACCATCTGCCAGATGGCTTTTATGATGCAGGACGTGATCGGCCTTTTATGCCCCTTGAAAGTTATGAGCAAAATCAGTGTCTTGCCTCTCGGGAAGTTATCCTATTGGACAGAGAAAGGGATGAAGAATTGGATGCTGTCACGCTTTCTGCTCAGGCATTGGTTTTTCATTTGAAGCAGTTAAATGAGTTTACCAAACATGGGAATCAGGCTGCTGTCGATAACTTTCAGATTGCATCACTGCTAGCACTCTTTGTATCGGATCATTTTGGGGGCAGTGATAGAAGTGCTATTGTAGAAAGGACCCGAAAATCAGTGTCTGGTTCAAACTATCAAAAACCTTTTGTCTGTACATGCTCAACTGGAAGCAACAGTGATAGTAGTGCTTCCACTAAACCAGTTGTAAACAGTGTAGAAGATATCACTCTTACTAACATCTGTGAAAAATCTCTTGACTCCATAAAAAGAAGGCAGAGTTCAATCATAGTGCCTATTGGATCTGTGCAGTTTGGTGTGTGTAGACATAGAGCTTTACTTTTGAAGTATTTATGTGATCACATGGAGCCACCGGTACCTTGTGAGCTTGTCAGAGGTTTCCTGGATTTCTCACCACATGCCTGGAATACCATCTTAGTTAACAGAGGTGATACACAGGTTCGGATGCTAGTTGATGCATGTCGGCCACATGATATAAGAGAAGAGGAAGACCCTGAGTTCTTTTGCAGGTACATACCTCTTAGACGAACCAGAGTTCCTCTTTCAATTGATGGAAATCTTGGTCCTGACTGTTCTTTCCCATCTCTTTCAACATGTGAAGAACTTAAGAAGGCAGATTTAAGTACTTTAGTTCGTTGCAAATTTGGATCAGTTGAGGCTGCAGCGAAGGTTCGTACTTTGGAAGTGCAGGAGAGTTCAGCGGACAAAATTAAAAACTTCGAATATAATTGTTTGGGAGAAGTGAGAATTCTAGGTGCTTTGAAGCACCCCTGTATAGTTGAAATGTATGGACACCAAATATCTTACCAGTGGACTCTTTCAGCAGATGGTAATCCTGAGCGTTGTGTGTTAAGGTCTGCAATTTTCATGGAGTTCATGAAAGGGGGATCATTAAGAAACTATCTAGATAAGTTATCAAAAGCTGGCGAAAAGCAGGTTCCACTGGAGTTGGCTTTGTATATTGCCAAAGATGTAGCATGTGCTTTGTCAGAGCTGCACTCAAAGCACATAATTCATCGTGACATTAAAAGTGAAAACATTCTAGTTGACTTGAATAGAAAGAAAGATGATGGCACTCCCACTGTGAAGCTTTGTGATTTTGATAGTGCAGTGCCACTAAGATCACCACTACATAAATGCTGTATTGCTCACGTGGGAGTGCCTCCTCCTCACGTATGCGTTGGAACACCTCGTTGGATGGCTCCGGAAGTTATGCGGACTATGTATAAAGAAAATACTTATGGATTGGAAGCTGATATTTGGTCATTTGGATGTTTGCTTCTGGAGCTGCTGACTTTGCAAATCCCATATTCTGGGGTGCCTGATTTACAATTCCATGACGTTCTGCAGATTGGTAAACCACCACAATTAACTGATGATCTGGAGGCATTGAGTTCAATGAGTGAACCCACAATGATTCAATCCAGTGAAGGCCCAGAGAAATCAGATACCGAGGTGGATGGGATGAAATTCCTTGTTGATTTGTTTCATAGGTGTGTAGAAGAAAATCCAACCAAACGACCTACGGCAGAAGAAATTTATGAAGTGTTGCTTGCACAGACAGGCCGCCTACAAGTTCAAGATGTTAGAAAGAGTTAG 3363 0.4151 MKLLQSEETASEACDFPEEAEEEKRPSTSLVEGDDRGVDNGDAVLDVCGKTVEFPVLENAEDFVEGLYFYKNVYNLIPKSLGGFERLRTLKFFGNEINLFAPEFGNLTGLECLQMKISSPGIGGLPLHKLKGLKELELSKVPPRPSAFPILTEISGLKCLTKLSICHFSIRYLPPEIGCLKKLEYLDLSFNKMKTLPSEISFLNDLISLKVSNNKLVELPSTIASLSRLENLDLSNNRLTSLGRLDLGSMHKLRSLNLQYNKLLNIFQIPSWICCNMEGNDKGECSDDFSSSSVEMDVYESSLQENDGILSHGSHNTSSSLLTSSTSSSRCFADRKSGKRWKRRHYLQQKARQECLNNSRKWKGLDNSQLLSKKIHRICEPEKLDSVAPENSGETVSDNVNLDDDAKKLFSEEAGNDNVIDHVKNNEVGIENQFSKEDSCSSESKDEKDASLYPSENGPNEQNKASNSENFKCVSKSKRHSDRDLDNPKPCKSRKPIGDSSLLSSKYSSLSFCGIEDHLPDGFYDAGRDRPFMPLESYEQNQCLASREVILLDRERDEELDAVTLSAQALVFHLKQLNEFTKHGNQAAVDNFQIASLLALFVSDHFGGSDRSAIVERTRKSVSGSNYQKPFVCTCSTGSNSDSSASTKPVVNSVEDITLTNICEKSLDSIKRRQSSIIVPIGSVQFGVCRHRALLLKYLCDHMEPPVPCELVRGFLDFSPHAWNTILVNRGDTQVRMLVDACRPHDIREEEDPEFFCRYIPLRRTRVPLSIDGNLGPDCSFPSLSTCEELKKADLSTLVRCKFGSVEAAAKVRTLEVQESSADKIKNFEYNCLGEVRILGALKHPCIVEMYGHQISYQWTLSADGNPERCVLRSAIFMEFMKGGSLRNYLDKLSKAGEKQVPLELALYIAKDVACALSELHSKHIIHRDIKSENILVDLNRKKDDGTPTVKLCDFDSAVPLRSPLHKCCIAHVGVPPPHVCVGTPRWMAPEVMRTMYKENTYGLEADIWSFGCLLLELLTLQIPYSGVPDLQFHDVLQIGKPPQLTDDLEALSSMSEPTMIQSSEGPEKSDTEVDGMKFLVDLFHRCVEENPTKRPTAEEIYEVLLAQTGRLQVQDVRKS 1120
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa02g1754 1120 FunFam Leucine-rich repeat protein kinase family protein 830 1111 - -
Bisa02g1754 1120 MobiDBLite consensus disorder prediction 431 497 - -
Bisa02g1754 1120 SMART LRR_typ_2 226 249 IPR003591 -
Bisa02g1754 1120 SMART LRR_typ_2 250 276 IPR003591 -
Bisa02g1754 1120 SMART LRR_typ_2 180 202 IPR003591 -
Bisa02g1754 1120 SMART LRR_typ_2 203 225 IPR003591 -
Bisa02g1754 1120 MobiDBLite consensus disorder prediction 455 472 - -
Bisa02g1754 1120 ProSitePatterns Serine/Threonine protein kinases active-site signature. 925 937 IPR008271 GO:0004672|GO:0006468
Bisa02g1754 1120 PRINTS Leucine-rich repeat signature 183 196 - -
Bisa02g1754 1120 PRINTS Leucine-rich repeat signature 226 239 - -
Bisa02g1754 1120 SMART serkin_6 784 1106 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa02g1754 1120 MobiDBLite consensus disorder prediction 18 37 - -
Bisa02g1754 1120 Pfam Leucine rich repeat 208 263 IPR001611 GO:0005515
Bisa02g1754 1120 PANTHER SERINE/THREONINE-PROTEIN KINASE SBK1 110 1109 - -
Bisa02g1754 1120 Pfam Protein kinase domain 819 1102 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa02g1754 1120 ProSiteProfiles Protein kinase domain profile. 792 1105 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa02g1754 1120 ProSiteProfiles Leucine-rich repeat profile. 228 249 IPR001611 GO:0005515
Bisa02g1754 1120 Gene3D Transferase(Phosphotransferase) domain 1 783 1119 - -
Bisa02g1754 1120 ProSiteProfiles Leucine-rich repeat profile. 182 203 IPR001611 GO:0005515
Bisa02g1754 1120 SMART LRR_bac_2 203 222 - -
Bisa02g1754 1120 SMART LRR_bac_2 226 245 - -
Bisa02g1754 1120 SMART LRR_bac_2 180 199 - -
Bisa02g1754 1120 MobiDBLite consensus disorder prediction 438 452 - -
Bisa02g1754 1120 MobiDBLite consensus disorder prediction 1 37 - -
Bisa02g1754 1120 MobiDBLite consensus disorder prediction 473 493 - -
Bisa02g1754 1120 FunFam Leucine-rich repeat protein kinase family protein 53 296 - -
Bisa02g1754 1120 SUPERFAMILY RNI-like 72 276 - -
Bisa02g1754 1120 Pfam Ethylene-responsive protein kinase Le-CTR1 659 740 - -
Bisa02g1754 1120 SUPERFAMILY Protein kinase-like (PK-like) 789 1105 IPR011009 -
Bisa02g1754 1120 Gene3D Ribonuclease Inhibitor 48 286 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa02g1754 Bisa-ChrBisa02 32740393 32750933 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa02g1754 812 1107 MAP Kinase Kinase Kinase AT2G24360 28.283 2.39e-23 102
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-2 Bisa02g1754 Pkinase 1.6e-39 CL0016