Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa02g1747 ATGAATCGAGTGAAGGAGGAGTTTCCTGGAGCGAGTACCATGGCTTCTCCTCCTCCTCTTCCTCCACAGCCCATGGAGGGGCTCCACGAAGCAGGTCCTCCTCCGTTTCTGACAAAAACATTCGACATCGTCGACGACCCTTCGACGAATTACATAGTTTCGTGGAGCAGTGGGAACAATAGCTTCGTCGTGTGGGATCCTCAGTCGTTTTCCTTGAGCCTCCTTCCCAGATTCTTCAAGCACAACAATTTCTCCAGCTTTGTCAGGCAGCTCAACACTTATGGATTCAGAAAGGTTGATCCAGATAGGTGGGAATTTGCCAATGAAGGGTTTCTGAGAGGGCAAAGGCATCTTTTGAAGAACATTAGGAGAAGAAAGACACCTCATCATCATCAAGCTCTAGTCAACCAATCTCTAGATTCATGCGTTGAAGTTGGGCGGTTCGGATTAAACGGCGAAATCAACCAGCTCCGGCGAGACAAGCAGGTCTTAATTGTGGAGCTAGTGAAGCTCAGACAACAACAACAAAACACCAGAAGCTACCTGCAAGAAATGGAAGGCAGACTCAAGAAAACTGAACAAAAACAGCGACAAATGATGAACTTTTTGGCAAGAGCAATGCAGAATCCTAACTTTGTTCAGCAATTAGTTCATCAGAAGGAGTGGAAGAAGGAGTTAGAAGAAGCCTTTTCAAAGAAAAGAAGAAGGCCTATTGATCAAGGGCCTAGTAGTAGTAGTAGTATTAATGTTGACCTAGCATGTGAATTAGAATGCTCAGATTTTAAGCTTGAGCCTCAAGAGTTTGGGGACTTGGAGTTGATCGAGAACTTAGAGGAAGAAGCGCATGTGGAGAAGTTAGGGATTGAAGGTAGAGATAAAGAGACTGACGAAGTGTTTTGGCAAGACTTGTTGAATGGTGAGGATGTTGTGGAAGATCTACGAGGTTTCGAGGAAGACCATGAGGAAGATGTGGATGTGTTGGCTCAACAACTAGGGTATTTGGCCTCTTGTCCTAATTGA 1020 0.451 MNRVKEEFPGASTMASPPPLPPQPMEGLHEAGPPPFLTKTFDIVDDPSTNYIVSWSSGNNSFVVWDPQSFSLSLLPRFFKHNNFSSFVRQLNTYGFRKVDPDRWEFANEGFLRGQRHLLKNIRRRKTPHHHQALVNQSLDSCVEVGRFGLNGEINQLRRDKQVLIVELVKLRQQQQNTRSYLQEMEGRLKKTEQKQRQMMNFLARAMQNPNFVQQLVHQKEWKKELEEAFSKKRRRPIDQGPSSSSSINVDLACELECSDFKLEPQEFGDLELIENLEEEAHVEKLGIEGRDKETDEVFWQDLLNGEDVVEDLRGFEEDHEEDVDVLAQQLGYLASCPN 339
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa02g1747 339 ProSitePatterns HSF-type DNA-binding domain signature. 75 99 IPR000232 GO:0003700|GO:0006355|GO:0043565
Bisa02g1747 339 PRINTS Heat shock factor (HSF) domain signature 74 86 IPR000232 GO:0003700|GO:0006355|GO:0043565
Bisa02g1747 339 PRINTS Heat shock factor (HSF) domain signature 87 99 IPR000232 GO:0003700|GO:0006355|GO:0043565
Bisa02g1747 339 PRINTS Heat shock factor (HSF) domain signature 36 59 IPR000232 GO:0003700|GO:0006355|GO:0043565
Bisa02g1747 339 Pfam HSF-type DNA-binding 36 125 IPR000232 GO:0003700|GO:0006355|GO:0043565
Bisa02g1747 339 SMART hsfneu3 32 125 IPR000232 GO:0003700|GO:0006355|GO:0043565
Bisa02g1747 339 FunFam Heat shock transcription factor 1 29 126 - -
Bisa02g1747 339 Gene3D - 28 126 IPR036388 -
Bisa02g1747 339 MobiDBLite consensus disorder prediction 1 32 - -
Bisa02g1747 339 PANTHER HEAT SHOCK TRANSCRIPTION FACTOR 22 250 IPR027725 -
Bisa02g1747 339 Coils Coil 154 174 - -
Bisa02g1747 339 SUPERFAMILY "Winged helix" DNA-binding domain 32 125 IPR036390 -
Bisa02g1747 339 MobiDBLite consensus disorder prediction 14 29 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa02g1747 Bisa-ChrBisa02 32323653 32325677 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa02g1747 12 337 HSF AT3G22830 55.914 7.77e-128 370
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HSF Bisa02g1747 HSF_DNA-bind 2.8e-31 CL0123