Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa02g1716 ATGCATCTGAGGGTCCATAGTTTGTGGTGTACTTTAGCAATACTCTATCACGCCCTTTTCAAATTCGCCGCGCGCCAAAACGAAATGCTTAGCAATCGTGGTGGGGACGGGGTTATCCCTACGAGAAAATGTTCTCCCGCCTTCCCGCTTCTTGAATCCTCATCTCATCAGCAAAAGCGAAAACCCCAATTAGAAAGACACAGACACAGACACAGACCAAGAGAGAGAGACAGTGAGAGAGTGAGAGTGAGAGTGAGAGGGAAAGTCATAGGGAGAAGAAGGGAAGAGGAATGTGGAGAGGCTGCCTCTCTGGACATGGACACACCAGAAAGGAACCAGATCGGCACTCCTATTTCCAAATTTGAGGATTCACCTGTATTTAACTACATCAATAGTCTTTCTCCTATAAAGCCAGTTAAGTCTGTTCACAGTATTCAGACTTTCAACTCACTTAGCTTTTCATCCCCTCCCTCTGTTTTCACATCACCCCATGTCAGCTCTCACAAGGAATCTAGATTTCTCAGGAGGCATAACCTCTTGGACACATCAAAGCCCAAGGTTTTGTCTGAAGATGGGAAGAAAAAAAATTCAAGTGAAGAAGCTCGTGCAGATTCAAGTCATGCATATCATGACACAAGTGAGCTACAGGGAAATGCTGATCAAGGGATTCCCATGGGAAATTCTTCAATTGAGCCATCTAACGAACACCCAAGCTTTTCAATTGAGCTACCACAAACCTTAAAATATGATTGTGGTAGTCCAGGTTGTGATCCTCCATCTTGTGGTGATGAGACAAGTTCTCTTCTGGATTTGTCGAGTAAGGCAGCATCAGATGTTGCCAATGTTGATGAAGCCATTCGAAAAAATTCACCTGAGAGTGAAGTGCTTCTTCAGGGAATATGTCAAATTGAACCCAGAAATGGAGGCCCAGAATGTGATTGGGACAGTTTACTTGCTGCTGATCTGTTAATTTTTAACTCTCCAAATGAAAGAGAAGCTTTAAAGGGTCTAATGCAGAAATCAATTGACCAGACCATATGTCATAGCAATTTTATGTCTCAGTTGCCACAAACGACCATCAATAATGATGAGAAAATGCACAATGTTGGTGCAGTTCATAAACTTGAAGGTCATCATTCTAAACTAGGAGAAGCCACTGACAAGGATCAGGTGCAGGACAATCTTGCCAGTGCTGCTGTTATGGCTAGCAATCCAAATGATACATTGGATGATGAGCTTGTTTTTATAACACACCATGGTATGCGGAGGCGCTGTCTAGACTTTGAGATGGTTGGAATGAGAAGGAAGAATAGTTCAAATAACAGTTCCAATACATCACAATCTGATGAGAGAAATGTTACTGATGATAGGCAGCTGCTTCCTGCAAAACGCAGTGGTGATTCACAGAGGTGCATTTTGCCTGGAATTGGTTTGCACTTAAATGCACTTGCGACCTTGAAAGAGTGCAAAAGCATAAAAAATGAAAATATGTCTTCTGGAAGACAACTAAGTCTGCCTAGCCCTGCTTCTGCTTTGCAACTCTCTACAAGCCAAGAACATAATGTATCATTAGTGTCTGCATCTGCTGAAAGAGATTTAGATCCCCCAGACAACGGGGTTCAGCCTGCTGAGGATTGTTCCCAGCCATCAGCTTATGTGGTTGATGAAGATTTCAATCCGAATAGTCCGAAAAAGAAAAGGCGTAAGTTGGAGCCAGCTGGAGAAAGTGAGTCCTGTAAGCGTTGTAATTGCAAGAAATCAAAGTGTTTAAAGCTTTATTGTGAATGCTTTGCTGCTGGTGTCTACTGCATAGAACCTTGCTCCTGTCAGGATTGCTTCAACAAACCTATTCATGAGGATACTGTTCTTGCAACTCGAAAGCAGATTGAGTCTCGTAATCCTCTTGCATTTGCTCCTAAAGTCATCAGAAGTTCTGATTCTGTACCTGAAATTGGGGATGACCCAAATAAAACTCCAGCTTCAGCACGGCACAAACGAGGATGCAACTGCAAGAAATCAAGCTGCCTAAAGAAATACTGTGAATGTTATCAGGGTGGTGTTGGCTGCTCTATTAGCTGTAGATGTGAAGGGTGCAAGAATGCATATGGTAGAAAGGACGGTTCTACTCCTATAGGAATAGAAGCTGAACCAGAAGATGAAACAGAACCATCTGAGAAGGCTGTGGTTGAAAAACCTTCACAAAAATCTGAAATCCAGAGCAATGAAGAACAACCAGATTCTGCTCTTCCCACAACACCATTAAGGCTTTGCAGACCATTGCTTCCGTTGTCCTTTTCATCCAAGGGAAAACCGCCAAGATCTTCTTTTATTACTACCATACCAGCTTCTGGATTGTATGCCGGCCAAAAACTTGGGAAGCCCAGTATCCTTCGTTCACAAACCAAGTTTGAAAAGCAATTCAAAACTGTTTCTGACGATGAAATGCCAGAGGTTCTCCAAAGTGATGGCTCCCCTAGCATAAAGACATCTTCTCCCAATGGCAAGAGGATCTCCTCTCCTAACTGTGACTTTGGATCGTCCCCTAGTCGCAGAAGTGGCAGGAAGTTGATATTACAATCCATTCCCTCTTTTCCTTCTCTAACTCCTCACCTTTAG 2616 0.4304 MHLRVHSLWCTLAILYHALFKFAARQNEMLSNRGGDGVIPTRKCSPAFPLLESSSHQQKRKPQLERHRHRHRPRERDSERVRVRVRGKVIGRRREEECGEAASLDMDTPERNQIGTPISKFEDSPVFNYINSLSPIKPVKSVHSIQTFNSLSFSSPPSVFTSPHVSSHKESRFLRRHNLLDTSKPKVLSEDGKKKNSSEEARADSSHAYHDTSELQGNADQGIPMGNSSIEPSNEHPSFSIELPQTLKYDCGSPGCDPPSCGDETSSLLDLSSKAASDVANVDEAIRKNSPESEVLLQGICQIEPRNGGPECDWDSLLAADLLIFNSPNEREALKGLMQKSIDQTICHSNFMSQLPQTTINNDEKMHNVGAVHKLEGHHSKLGEATDKDQVQDNLASAAVMASNPNDTLDDELVFITHHGMRRRCLDFEMVGMRRKNSSNNSSNTSQSDERNVTDDRQLLPAKRSGDSQRCILPGIGLHLNALATLKECKSIKNENMSSGRQLSLPSPASALQLSTSQEHNVSLVSASAERDLDPPDNGVQPAEDCSQPSAYVVDEDFNPNSPKKKRRKLEPAGESESCKRCNCKKSKCLKLYCECFAAGVYCIEPCSCQDCFNKPIHEDTVLATRKQIESRNPLAFAPKVIRSSDSVPEIGDDPNKTPASARHKRGCNCKKSSCLKKYCECYQGGVGCSISCRCEGCKNAYGRKDGSTPIGIEAEPEDETEPSEKAVVEKPSQKSEIQSNEEQPDSALPTTPLRLCRPLLPLSFSSKGKPPRSSFITTIPASGLYAGQKLGKPSILRSQTKFEKQFKTVSDDEMPEVLQSDGSPSIKTSSPNGKRISSPNCDFGSSPSRRSGRKLILQSIPSFPSLTPHL 871
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa02g1716 871 MobiDBLite consensus disorder prediction 434 467 - -
Bisa02g1716 871 MobiDBLite consensus disorder prediction 61 75 - -
Bisa02g1716 871 MobiDBLite consensus disorder prediction 152 167 - -
Bisa02g1716 871 MobiDBLite consensus disorder prediction 708 753 - -
Bisa02g1716 871 MobiDBLite consensus disorder prediction 434 449 - -
Bisa02g1716 871 MobiDBLite consensus disorder prediction 168 209 - -
Bisa02g1716 871 Pfam Tesmin/TSO1-like CXC domain, cysteine-rich domain 580 615 IPR005172 -
Bisa02g1716 871 Pfam Tesmin/TSO1-like CXC domain, cysteine-rich domain 666 701 IPR005172 -
Bisa02g1716 871 ProSiteProfiles CRC domain profile. 578 703 IPR005172 -
Bisa02g1716 871 MobiDBLite consensus disorder prediction 498 546 - -
Bisa02g1716 871 MobiDBLite consensus disorder prediction 733 748 - -
Bisa02g1716 871 SMART CXC_2 663 704 IPR033467 -
Bisa02g1716 871 SMART CXC_2 577 618 IPR033467 -
Bisa02g1716 871 MobiDBLite consensus disorder prediction 498 525 - -
Bisa02g1716 871 MobiDBLite consensus disorder prediction 152 238 - -
Bisa02g1716 871 MobiDBLite consensus disorder prediction 810 852 - -
Bisa02g1716 871 PANTHER PROTEIN TESMIN/TSO1-LIKE CXC 2 106 870 IPR044522 GO:0003700
Bisa02g1716 871 MobiDBLite consensus disorder prediction 47 80 - -
Bisa02g1716 871 MobiDBLite consensus disorder prediction 210 238 - -
Bisa02g1716 871 MobiDBLite consensus disorder prediction 822 852 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa02g1716 Bisa-ChrBisa02 31677602 31685319 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa02g1716 121 870 CPP Transcription Factor Family AT4G14770 44.980 1.03e-167 500
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF CPP Bisa02g1716 TCR 3.5e-11 No_clan