Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa02g1671 ATGTTAATGCAAGCTCATTGCCTTCTTCATGTTGCCATGACCCCTCATCACTCCTCTGTTGCTCTGTCTTCAACCAGATTGTTCATAGCAACAAATGTTGTTGAAGGGGCCATCAGTGCACTTGCAGGAGCCACTAAGGAAGCAGCTGGATGCCTGTCAAATCACCTAGGCATAATTGAAGCCGATGGTGATATTGGATGTTATTTGGAGCAAGGCGTTTGTGGTGATAGGGATTGTCGCTTTGAGACCGAGCACGAAGAATTCTTCTGTGCCTTTGAGGCTCTGGATGTGTGGGTATTTGATTTCTTGGAGCTTGTTTGTATTTGTGCTACGAATACACTGTCTCTGCGAGGCGCCCACTTCTTCTCCTTCTTCTCTTCTTTCTTCCTGTTCATGGAGCTTCAGAAGCGCCAAGATCAGGGCTTCCCTGAGAAGAAGGGACAGAAGCGGAAGCTGGAGGAGGAATTGGGAGAGGAGTCAGAGATCTCGGCTCCACCCACCGGCGACGCCCGTGACGCGTTGCTCGCCGAGGTGACGGTGCAGGTTCATATCCTCGACTCCGCTTTCTCATGGAAGGAAGCTGATCGAGCCGCGGCTAAGCGCGCCACGCACGTCCTCGCTGAGCTTGCCAAGAATGAAGAAGTAGTGAGCGTGATTGTTGAAGGAGGCGCAATTCCGGCTTTGGTTAAGCATCTTCAAGCGCCTTCTTTGGATGAAAACTATCATGGACAGAAACCATTAGAACACGAAGTTGAGAAAGGGAGTGCTTTTGCTCTTGGACTTCTTGCCGTCAAGCCAGAACATCAGCAACTCATTGTTGACAACGGTGCCTTAAAATATCTTGTTAATCTGTTGAAGAGGCATAAAAGTAGTTCTACTTCTCGTGCGGTGAATAGTGTTATCCGTAGGGCTGCAGATGCAATCACTAATCTTGCCCATGAAAACAGTAGCATTAAAACCTATGTCAGGATGGAAGGTGGGATTCCACCACTTGTTGAATTGCTTGAATTCACTGATATGAAGGTGCAAAGAGCAGCTGCTGGTGCACTGAGAACCCTGGCTTTTAAAAATGATGAAAATAAAAATCAGATTGTTGAATGCAATGCTCTTCCAACTCTGATTCTAATGCTTCGTTCTGAAGATACTGTTATTCATTATGAAGCGGTTGGTGTGATTGGAAATCTGGTACACTCTTCTCCTAATATAAAAAAAGAAGTTATACTTGCTGGAGCTTTACAACCTGTAATTGGATTACTTCGATCCAGCTGCTCTGAGAGCCAAAGGGAAGCAGCCTTGTTAATTGGACAATTTGCAGCCACTGATTCAGACTGCAAGGTTCACATTGTACAGAGAGGTGCAGTTCCACCTCTGATAGATATGCTTCAGTCCCCTGATGTACAGCTCCGAGAAATGTCTGCCTTTGCATTGGGGAGATTGGCACAGGACACACATAACCAAGCTGGTATTGCACACAGTGGTGGTTTAGTTCCTTTACTCAAGCTTCTTGACTCAAAAAATGGGTCTTTGCAACATAATGCTGCTTTTGCTCTTTATGGCCTTGCAGATAGCGAGGATAATGTGTCCGATTTTATTAGGGTAGGTGGGGTTCAAAGACTTCAGGATGGAGAGTTTATTGTTCAAGCAACAAAAGATTGCGTTGCAAAGACATTGAAAAGATTAGAGGAAAAGATTCATGGCCGTGTTCTGAGTCATTTGTTATATCTTATGCGAGTTTCAGAAAAGGCTGTTCAAAGACGAGTTGCTTTGGCTCTTGCTCATCTTTGTTCCGTGGATGATCAGAGAATAATATTCATTGATAACAATGGTTTGGAGTTGCTTATTGGGCTTCTTGGCTCTTCTAGCACAAAGCAGCAACTTGATGGGGCCATTGCTTTATGCAAGTTGGCCAACAAAGCCATGACTGTGTCTCCTGTAGATGCTGCTCCCCCTTCTCCAACACCCCAGGTCTATTTGGGAGAGCAGTATGTAAACAATGCTACATTGTCTGATGTCACATTTTTGGTTGAAGGGAAACGATTTTATGCTCACAGAATCTGCCTGCTTGCATCTTCAGATGCATTTCGTGCAATGTTCGATGGTGGTTATAGGGAGAAGGATGCCAGGGATATAGAGATTCCAAATATACGATGGGAGGTTTTTGAGCTTATGATGAGATTCATATACACTGGATCAGTTGATATTACTCTGGACATTGCCCAAGACCTCCTCCGAGCAGCTGATCAATATCTTCTTGAAGGACTTAAGAGACTCTGTGAGTACACAATTGCACAGGATATATCACTAGAGAATGTGTCAAGTATGTATGAACTTTCAGAATCCTTTAATGCAATATCACTGAGGCACACCTGCATTCTTCATATTTTGGAGCACTATGATAAACTGAGTGCGAGGCCAGGGCACTCTCATCTGATTCAGCGCATAATACCAGAGATGCGCAATTACTTTGCAAAAGTGCATACGAAGGCTATTTCCGATAATGTCCAATAG 2508 0.4454 MLMQAHCLLHVAMTPHHSSVALSSTRLFIATNVVEGAISALAGATKEAAGCLSNHLGIIEADGDIGCYLEQGVCGDRDCRFETEHEEFFCAFEALDVWVFDFLELVCICATNTLSLRGAHFFSFFSSFFLFMELQKRQDQGFPEKKGQKRKLEEELGEESEISAPPTGDARDALLAEVTVQVHILDSAFSWKEADRAAAKRATHVLAELAKNEEVVSVIVEGGAIPALVKHLQAPSLDENYHGQKPLEHEVEKGSAFALGLLAVKPEHQQLIVDNGALKYLVNLLKRHKSSSTSRAVNSVIRRAADAITNLAHENSSIKTYVRMEGGIPPLVELLEFTDMKVQRAAAGALRTLAFKNDENKNQIVECNALPTLILMLRSEDTVIHYEAVGVIGNLVHSSPNIKKEVILAGALQPVIGLLRSSCSESQREAALLIGQFAATDSDCKVHIVQRGAVPPLIDMLQSPDVQLREMSAFALGRLAQDTHNQAGIAHSGGLVPLLKLLDSKNGSLQHNAAFALYGLADSEDNVSDFIRVGGVQRLQDGEFIVQATKDCVAKTLKRLEEKIHGRVLSHLLYLMRVSEKAVQRRVALALAHLCSVDDQRIIFIDNNGLELLIGLLGSSSTKQQLDGAIALCKLANKAMTVSPVDAAPPSPTPQVYLGEQYVNNATLSDVTFLVEGKRFYAHRICLLASSDAFRAMFDGGYREKDARDIEIPNIRWEVFELMMRFIYTGSVDITLDIAQDLLRAADQYLLEGLKRLCEYTIAQDISLENVSSMYELSESFNAISLRHTCILHILEHYDKLSARPGHSHLIQRIIPEMRNYFAKVHTKAISDNVQ 835
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa02g1671 835 CDD BTB_POZ_ARIA_plant 656 771 - -
Bisa02g1671 835 Gene3D Potassium Channel Kv1.1; Chain A 652 797 IPR011333 -
Bisa02g1671 835 SUPERFAMILY ARM repeat 195 540 IPR016024 -
Bisa02g1671 835 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 452 494 IPR000225 GO:0005515
Bisa02g1671 835 Gene3D - 177 336 IPR011989 -
Bisa02g1671 835 Gene3D - 543 651 IPR011989 -
Bisa02g1671 835 SUPERFAMILY ARM repeat 567 638 IPR016024 -
Bisa02g1671 835 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 326 361 IPR000225 GO:0005515
Bisa02g1671 835 Gene3D - 338 541 IPR011989 -
Bisa02g1671 835 Pfam BTB/POZ domain 662 764 IPR000210 GO:0005515
Bisa02g1671 835 SUPERFAMILY POZ domain 661 763 IPR011333 -
Bisa02g1671 835 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 493 535 IPR000225 GO:0005515
Bisa02g1671 835 ProSiteProfiles BTB domain profile. 669 736 IPR000210 GO:0005515
Bisa02g1671 835 Pfam Armadillo/beta-catenin-like repeat 319 354 IPR000225 GO:0005515
Bisa02g1671 835 Pfam Armadillo/beta-catenin-like repeat 441 480 IPR000225 GO:0005515
Bisa02g1671 835 Pfam Armadillo/beta-catenin-like repeat 357 396 IPR000225 GO:0005515
Bisa02g1671 835 SMART arm_5 441 481 IPR000225 GO:0005515
Bisa02g1671 835 SMART arm_5 482 522 IPR000225 GO:0005515
Bisa02g1671 835 SMART arm_5 265 313 IPR000225 GO:0005515
Bisa02g1671 835 SMART arm_5 212 264 IPR000225 GO:0005515
Bisa02g1671 835 SMART arm_5 399 439 IPR000225 GO:0005515
Bisa02g1671 835 SMART arm_5 315 355 IPR000225 GO:0005515
Bisa02g1671 835 SMART arm_5 596 637 IPR000225 GO:0005515
Bisa02g1671 835 SMART arm_5 357 397 IPR000225 GO:0005515
Bisa02g1671 835 MobiDBLite consensus disorder prediction 141 158 - -
Bisa02g1671 835 PANTHER ARM REPEAT PROTEIN INTERACTING WITH ABF2 132 830 IPR044282 -
Bisa02g1671 835 FunFam Armadillo/beta-catenin repeat family protein 660 804 - -
Bisa02g1671 835 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 368 410 IPR000225 GO:0005515
Bisa02g1671 835 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 223 277 IPR000225 GO:0005515
Bisa02g1671 835 MobiDBLite consensus disorder prediction 141 166 - -
Bisa02g1671 835 SMART BTB_4 669 766 IPR000210 GO:0005515
Bisa02g1671 835 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 276 326 IPR000225 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa02g1671 Bisa-ChrBisa02 30019651 30029441 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa02g1671 425 539 U-box Gene Family AT3G46510 31.624 4.67e-08 54.7
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR TRAF Bisa02g1671 BTB 4.2e-26 CL0033