Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa02g1643 ATGGCTTCTTCTTCTTCTTCTTCGTTATTCAGAGAAACAATCCTTTCATTTTTGGTGGTGTTTTTCTTCGTGACAAGCCCTAGTCCTACTCAAGGAAAATCTGGTGAAAAAGACGAAATAGGGTCTGGTAAAATAGACGGGATAGACTCTCAACTGTTAACTGAGAAGATTCCTGCTAATCGAACTATAAAGGTGGATGTGAATGGCAATGGGGAGTTCAAATCTGTGCAAGCAGCTATAGATTCTATTCCTGAAGGAAATTCTCGGTGGGTCATCGTTCATCTTAGGAAAGGAGTTTTCAGAGAGAAGGTACACATACCAAAGAGCAAGCCCTTCATATTCATGAGAGGCAACGGAAGAGGCAAAACCGTCATAGTTGAGTCTCAAAGTGCTGCTGATAACCTGGACTCTGCTATCTTCAAGGTTGAAGCCCCGAACTTCGTTGCCTTCGGAATCAGCTTCAAGAATGAGGCACCTACGGGAGTGGCTTATACGTCGCAGAATCAATCGGTGGCGGCAGTTGTAGCGGCGGATAAAGCGGCGTTCTATCACTGTGCGTTTTACAGCACTCACAATACTCTCTTTGATAACAAAGGCAGGCATTACTACGATTCTTGCTACATTCAAGGTTCTATTGATTTCATTTTTGGACGTGGCAGATCCATCTTCCAGAACTGCGAGATATTCGTGATAGACGACAAGAGGACGAAAATAAAAGGGTCAATCACAGCCCAAAAGAGAGAGGAAGAAAAGGAGAACAGTGGATTTGTGTTCAGGGATGGGAGAGTGTATGGCATCGGAGGGGTGTACCTTGGGAGGGCCAAGGGAGCCTATTCAAGAGTCATCTTCGCCAACATGTACCTCTCTGCCACCATTGTCCCTGAGGGCTGGGCCCGCTGGAGCCATGTGGGCACAACTGATAAGCTATACCATGCGGAGTACAATAACAAAGGACCTGGATCCAACACCTCCCAACGTGTTCCATGGGCGAAGCAACTCACTGAGGAAGAAGTGGCACCCTTCCTGTCCGTTGATTTCATCAACGGCCCAGAATGGCTCCCAGTCTGGTCCCAATAG 1077 0.4689 MASSSSSSLFRETILSFLVVFFFVTSPSPTQGKSGEKDEIGSGKIDGIDSQLLTEKIPANRTIKVDVNGNGEFKSVQAAIDSIPEGNSRWVIVHLRKGVFREKVHIPKSKPFIFMRGNGRGKTVIVESQSAADNLDSAIFKVEAPNFVAFGISFKNEAPTGVAYTSQNQSVAAVVAADKAAFYHCAFYSTHNTLFDNKGRHYYDSCYIQGSIDFIFGRGRSIFQNCEIFVIDDKRTKIKGSITAQKREEEKENSGFVFRDGRVYGIGGVYLGRAKGAYSRVIFANMYLSATIVPEGWARWSHVGTTDKLYHAEYNNKGPGSNTSQRVPWAKQLTEEEVAPFLSVDFINGPEWLPVWSQ 358
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa02g1643 358 ProSitePatterns Pectinesterase signature 2. 208 217 IPR033131 -
Bisa02g1643 358 PANTHER ACYL-COA THIOESTER HYDROLASE YBHC-RELATED 54 353 - -
Bisa02g1643 358 SUPERFAMILY Pectin lyase-like 58 355 IPR011050 -
Bisa02g1643 358 Gene3D - 57 357 IPR012334 -
Bisa02g1643 358 Pfam Pectinesterase 64 349 IPR000070 GO:0030599|GO:0042545
Bisa02g1643 358 FunFam Pectinesterase 57 357 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa02g1643 Bisa-ChrBisa02 29356662 29362470 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa02g1643 60 353 Carbohydrate Esterase AT5G47500 39.474 1.48e-72 228