LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Bisa02g1636	ATGGAGGAGAAGAAGAGAGAGGCAGAGCCCGAGTCTTCCATGGCATTTCCCGACGAGATTCTGATCGCCACCACTGGCGGCTTCGGTTACTCCACCGTCTTCGATGCGGCGCCGTTTTCGTCATGCGATCATCTTCATCATCATCAGCTCGAAAAGCCTGCGTCCTCCTCTGCCTTCATCGACTTGCTAAGCGTCCACGATTACAGCCCTTCTTTACTCGATTGGCCTCCCCCCTCCGCCGCCGCAGTCCACAACTGTCTCCCTTCGCCGGTGAGCTCCGGCGGGGCCTTCAACGCTCCGGCCTCCACGAATTCCTCGTCGATTTCGTCGTCCTCCAACGAAGCTGCGGCTGCCGCCGGCGGAGGCGAGGAGGAACAGAGTGGTAAAGCAGGGAATGAAGGTGAAGCTGCAGAGGATGAAGATGGCGATGGAGGAAGAGGAGACGATCAAGATCAAGACAAGGCTAAGAAAGAGTTGAAACCGAAGAAGAAGAAGGAAAAGAAGCAAAGAGAACCAAGATTCGCGTTCATGACAAAGAGCGAAGTGGATCACCTTGACGATGGCTATAGGTGGCGCAAGTACGGCCAAAAGGCTGTTAAAAATAGCCCCTACCCCAGGAGTTATTATCGTTGCACCACAGCCGGCTGCGGCGTGAAGAAGAGGGTGGAACGATCCTCGGAGGACCCTACGATGGTGGTGACCACCTATGAGGGGCAGCACACGCACCCGAGCCCGGCGGCGGCTCGGGCCAGCCTCGGGTTCGGGCCCACTAGGGGGTTGGGTGGTGGTGGTGAAGGTCTTGGTTTGGGTCATTTGATGGTTCCACAGCCTCAGCATTATCATCAGTTTCAACAGCCAAACCTGTCGTCGGCTTTGTTATATGCCTCAACCACACCTTTGAGCATCATTAGCTCTAGCAGTACCAGCTACATGAATATGAATTCATCGATATCAAGGACGTCGTTTAGCAGTAGCTACCTTGAAGAGGATCATAATAATATTGGAGGTTTGCTAAGAGACGATGGGCTTCTTCAGGATATTGTGCCATCACAGATGAGGAAATTAGATGATCATGAGAAGCAACAAGAGTAG	1092	0.5348	MEEKKREAEPESSMAFPDEILIATTGGFGYSTVFDAAPFSSCDHLHHHQLEKPASSSAFIDLLSVHDYSPSLLDWPPPSAAAVHNCLPSPVSSGGAFNAPASTNSSSISSSSNEAAAAAGGGEEEQSGKAGNEGEAAEDEDGDGGRGDDQDQDKAKKELKPKKKKEKKQREPRFAFMTKSEVDHLDDGYRWRKYGQKAVKNSPYPRSYYRCTTAGCGVKKRVERSSEDPTMVVTTYEGQHTHPSPAAARASLGFGPTRGLGGGGEGLGLGHLMVPQPQHYHQFQQPNLSSALLYASTTPLSIISSSSTSYMNMNSSISRTSFSSSYLEEDHNNIGGLLRDDGLLQDIVPSQMRKLDDHEKQQE	363

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Bisa02g1636	363	MobiDBLite	consensus disorder prediction	98	175	-	-
	Bisa02g1636	363	MobiDBLite	consensus disorder prediction	98	116	-	-
	Bisa02g1636	363	ProSiteProfiles	WRKY domain profile.	180	245	IPR003657	GO:0003700\|GO:0006355\|GO:0043565
	Bisa02g1636	363	Pfam	WRKY DNA -binding domain	186	243	IPR003657	GO:0003700\|GO:0006355\|GO:0043565
	Bisa02g1636	363	Gene3D	WRKY domain	170	246	IPR036576	GO:0003700\|GO:0006355\|GO:0043565
	Bisa02g1636	363	PANTHER	WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED	82	289	IPR044810	GO:0003700
	Bisa02g1636	363	FunFam	WRKY transcription factor 57	171	245	-	-
	Bisa02g1636	363	SUPERFAMILY	WRKY DNA-binding domain	177	245	IPR036576	GO:0003700\|GO:0006355\|GO:0043565
	Bisa02g1636	363	SMART	WRKY_cls	185	244	IPR003657	GO:0003700\|GO:0006355\|GO:0043565

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Bisa02g1636	Bisa-ChrBisa02	29075430	29077123	Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Bisa02g1636	155	353	WRKY Transcription Factor Family	AT5G49520	50.971	4.36e-54	181

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	TF	WRKY	Bisa02g1636		WRKY	2.4e-27	CL0274