Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa02g1620 ATGCCCAGTCAATTTGCAGATATGCCTGTTGTTTTTCTGTGTCTTCTGTCCCTCTGTTTCTCCCCTTTGCCTATTCCTCTCATTAAAGCGTCAGACATAAATGTAGATCCCTATGAGCTTGATAGGGTAATTAATCTTCCAGGCCAACCCCCAAGCCCCTCAATCTCACATTTTTCAGGTCATATTACTGTCAATGAAGAGCATGGGAGGGCCCTTTTCTACTGGTTCTTTGAAGCTCAGTCTGAATCCTCCAAGAAGCCTCTCCTCCTCTGGCTCAATGGAGGACCTGGATGCTCCTCAATTGGGTATGGTGCGGTTGTTGAGATAGGTCCTCTTACAGTCAACAAAAATGGTGAAGGACTTCAATTCAACAACTACTCCTGGAATCAAGAGGCAAATTTGTTATTTGTGGAATCCCCAGTTGGAGTTGGTTTTTCTTACACCAACACTTCTTCTGATCTTACCATCTTAGAGGATAGTTTTGTGGCTGAGGATGCCTACATTTTCTTGGTAAATTGGCTGCAAAGATTTCCACAGTTTAAGTCCCGGGATTTCTTTATAGCTGGAGAGAGTTATGCAGGCCACTATATCCCTCAGCTTGCCGAGCTTGTCTTTGATCGAAACAAAGATCGAAACAAATACCCATTTATCAATCTTAAAGGTTTTATTGTTGGGAATCCAGAGACTGATGATTACTATGATTATAAAGGCCTTCTGGAATATGCATGGAGCCATGCAGTCATATCAGATCAGGAATATGACAAAGCAAAACAAGTTTGTGATTTTAAGCAATCTGAATGGTCTAAGGAATGCAATGAGGTCATGAATGTAGTCTTCCAATATTACTCGGAGATAGACATCTACAACATTTATGCCCCAGCTTGTCTCCTAAATAGTACTTCCTCTGATGGCAACAGTATTGGCTCCGAATTATTTACTAAGGTGAGAAATGATTATAGACTAAGGAGAACTAGAATTCATGGTGGCTATGACCCATGTTATTCCACATATGCCGAAGAATATTTCAATAGGATAGATGTTCAGTCATCTTTTCATGCTAATGTCATAGGAGGAAACACTAACGTAACATGGAAGACCTGCAATGACTCCATATTAAGGACATATAACTTCTCTGTTTTCTCTGTGCTACCCGTCTACACAAAACTCATCAAGGGTGGGCTTAAGGTGTGGATTTACAGTGGGGACACAGATGGCAGAATACCAGTGATAGGGACAAGATATTGCATTGAGACTCTTGGATTACCTCTCAAGTCTAGTTGGCGATCTTGGTACCATGATAATCAGGTTGGAGGGAGGATAGTGGAGTACGAAGGACTGACATATGTGACAGTAAGAGGAGCAGGTCATTTGGTGCCTCTCAACAAGCCCAGTGAGGCTCTCTCTCTTATTCGTTCTTTCCTAACAGGACAGCATCTCCCTACTCGTTCATGA 1452 0.4201 MPSQFADMPVVFLCLLSLCFSPLPIPLIKASDINVDPYELDRVINLPGQPPSPSISHFSGHITVNEEHGRALFYWFFEAQSESSKKPLLLWLNGGPGCSSIGYGAVVEIGPLTVNKNGEGLQFNNYSWNQEANLLFVESPVGVGFSYTNTSSDLTILEDSFVAEDAYIFLVNWLQRFPQFKSRDFFIAGESYAGHYIPQLAELVFDRNKDRNKYPFINLKGFIVGNPETDDYYDYKGLLEYAWSHAVISDQEYDKAKQVCDFKQSEWSKECNEVMNVVFQYYSEIDIYNIYAPACLLNSTSSDGNSIGSELFTKVRNDYRLRRTRIHGGYDPCYSTYAEEYFNRIDVQSSFHANVIGGNTNVTWKTCNDSILRTYNFSVFSVLPVYTKLIKGGLKVWIYSGDTDGRIPVIGTRYCIETLGLPLKSSWRSWYHDNQVGGRIVEYEGLTYVTVRGAGHLVPLNKPSEALSLIRSFLTGQHLPTRS 483
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa02g1620 483 FunFam Carboxypeptidase 330 479 - -
Bisa02g1620 483 FunFam Carboxypeptidase 37 297 - -
Bisa02g1620 483 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 43 463 IPR001563 GO:0004185|GO:0006508
Bisa02g1620 483 FunFam Carboxypeptidase 382 476 - -
Bisa02g1620 483 Pfam Serine carboxypeptidase 47 475 IPR001563 GO:0004185|GO:0006508
Bisa02g1620 483 SUPERFAMILY alpha/beta-Hydrolases 43 479 IPR029058 -
Bisa02g1620 483 ProSitePatterns Serine carboxypeptidases, histidine active site. 446 463 IPR033124 GO:0004185
Bisa02g1620 483 Gene3D alpha/beta hydrolase 38 297 IPR029058 -
Bisa02g1620 483 PRINTS Carboxypeptidase C serine protease (S10) family signature 137 147 IPR001563 GO:0004185|GO:0006508
Bisa02g1620 483 PRINTS Carboxypeptidase C serine protease (S10) family signature 173 198 IPR001563 GO:0004185|GO:0006508
Bisa02g1620 483 PRINTS Carboxypeptidase C serine protease (S10) family signature 124 136 IPR001563 GO:0004185|GO:0006508
Bisa02g1620 483 PRINTS Carboxypeptidase C serine protease (S10) family signature 446 459 IPR001563 GO:0004185|GO:0006508
Bisa02g1620 483 Gene3D - 333 371 - -
Bisa02g1620 483 Gene3D - 382 476 - -
Bisa02g1620 483 ProSitePatterns Serine carboxypeptidases, serine active site. 187 194 IPR018202 GO:0004185
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa02g1620 Bisa-ChrBisa02 28708196 28712432 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa02g1620 364 479 Calmodulin-binding Proteins AT2G22960 32.479 3.65e-15 72.0