Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa02g1602 ATGGTTTGGTTTCAGTGCGAGGATTGTGGGGACAATCTGAAGAAGCCTAAGTTGCCGAATCATTTCAGAACTTGTTCCGCTTCGAAGTTATCTTGCATTGATTGTGGACAAATATTTGGCCAAGACGCTGTTCAGCAACATACACAGTGTATTACCGAAGCGGAAAAGTATGGTCCGAAAGGTCAAGGAAAATCTTTGAATGTTACAACTGCCAAACCTAATAAGGATAACAAGCAAAGGCCTGAAGTTGATATTCATGTTGGGTTATCAGAACGGCCTCCATGGTTTTGTAGTCTCTGCAATACAAATGCTACGAGTAAGCAAGCACTTCTTCTCCATGCTGATGGAAAGAAACACAGGGCAAAAGCTCGAGCATTCCATGCAAAGCAACAACCAACCACTCCAGACCTATCTGCTCCTGATGCCAATCTTCCAGGGGAGCATGGTTCAAATGAATTGCAAGTCAACAATAATGTAAAGGAGCCAAAAGAGGATACAACAAATAAAAAGAGAAAATCTGACGCGGTGGAGGATAACCCTACGAGGAAAAAGGGCAGAGACGACACTTCAACTGAGATCGGAAATGGGGAAGTAAATCAGGGTGAAAAAGCAGAAGCAGCAGAAAGAGAGAGTCATTTGAAGAAAGAAAGGATGGTTGAATCTCATTGTACGAGTGACAACAAGAAGAAAATAAACTGGAAGCAGTTTATCAAATCAGCTTTGAAATCTCATCCTGATGGAAAATTGAAGATGAAGAAATTGAGAAAACTTGTTTTCAAAGCCCTCCAGGAATCTGGCATTGTAGTGGATGAAACAGAACTTAGCGAGGCACTTGAGAAGAAGATCAATTCAAGTTCCCGATTTGCAGTTGAGAACGAGTATGTGCTTTTGGTTACCAAGGACTGTAAGGAGTAG 915 0.4175 MVWFQCEDCGDNLKKPKLPNHFRTCSASKLSCIDCGQIFGQDAVQQHTQCITEAEKYGPKGQGKSLNVTTAKPNKDNKQRPEVDIHVGLSERPPWFCSLCNTNATSKQALLLHADGKKHRAKARAFHAKQQPTTPDLSAPDANLPGEHGSNELQVNNNVKEPKEDTTNKKRKSDAVEDNPTRKKGRDDTSTEIGNGEVNQGEKAEAAERESHLKKERMVESHCTSDNKKKINWKQFIKSALKSHPDGKLKMKKLRKLVFKALQESGIVVDETELSEALEKKINSSSRFAVENEYVLLVTKDCKE 304
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa02g1602 304 FunFam UBP1-associated proteins 1C 89 132 - -
Bisa02g1602 304 Pfam Zinc-finger of C2H2 type 95 119 - -
Bisa02g1602 304 MobiDBLite consensus disorder prediction 61 80 - -
Bisa02g1602 304 FunFam cell growth-regulating nucleolar protein-like 1 50 - -
Bisa02g1602 304 Gene3D - 1 50 - -
Bisa02g1602 304 SMART ZnF_U1_5 92 126 IPR003604 GO:0003676|GO:0008270
Bisa02g1602 304 MobiDBLite consensus disorder prediction 121 226 - -
Bisa02g1602 304 MobiDBLite consensus disorder prediction 202 226 - -
Bisa02g1602 304 Pfam LYAR-type C2HC zinc finger 30 57 IPR014898 -
Bisa02g1602 304 ProSiteProfiles Zinc finger C2HC LYAR-type profile. 1 26 - -
Bisa02g1602 304 SUPERFAMILY beta-beta-alpha zinc fingers 30 58 IPR036236 -
Bisa02g1602 304 SUPERFAMILY beta-beta-alpha zinc fingers 86 130 IPR036236 -
Bisa02g1602 304 SUPERFAMILY beta-beta-alpha zinc fingers 1 26 IPR036236 -
Bisa02g1602 304 ProSiteProfiles Zinc finger C2HC LYAR-type profile. 27 51 - -
Bisa02g1602 304 Gene3D Classic Zinc Finger 89 131 - -
Bisa02g1602 304 MobiDBLite consensus disorder prediction 158 191 - -
Bisa02g1602 304 PANTHER CELL GROWTH-REGULATING NUCLEOLAR PROTEIN LYAR 1 298 IPR039999 GO:0003677
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa02g1602 1 131 C2H2 Transcription Factor Family AT2G19380 42.632 2.74e-42 152