Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa02g1598 ATGAAGAAAGGAAGTTTAGGCCCGAGTCTCAAACTCACTGTTCCTCCATCTGATCAAGCTTCCTTTGCAAACTTTTTGACTGCAAGCGGGACTTTCAAGGATGGGGATCTGCTGGTCAATAGGGACGGGGTTCGAATTGTCTCTCAGGGTGAAGTTGAAGCTCCACCCCCTATCAGGCCACTAGACAACCAGTTAAGTTTAGACGACATAGTTACAATCAAGGTGGTTGGAAAGGGCAGTGGCGGAATAGTACAATTGGTGCAACACAAATGGACTAATCAGTTTTTTGCATTAAAGGTGATTCAAATGAATATTGAGGAGTCCATGCGCAAGCAGATAGCACAAGAGTTGAAAATTAATCAGTCAGCTCAATGTCCTTATGTTGTTGTCTGTTACCAGTCCTCCTATGAAAATGGCGTCATATCTATTATCTTAGAGTACATGGATGGAGGGTCTTTAGAAGATCTTCTGAAGAAAGTGAAAACAATTCCAGAGGCATATCTTGCTGCCATCTGCAAGCAGGTGCTGAAGGGTTTAATGTATCTTCACCATGAAAAACATATTATTCACAGGGACTTAAAACCTTCCAATTTGTTGATAAATCACAGAGGGGAAGTAAAGATCACTGACTTTGGTGTCAGTGCAATTATGGAAACTACATCTGGTCAAGCTAACACTTTCATTGGAACATACAACTATATGTCTCCTGAGAGAATCAATGGATTCCAGCGTGGCTACAACTACAAAAGTGATATATGGAGTTTGGGACTAATACTGCTTGAGTGTGCTATAGGGAGGTTTCCATATATGCCACCAGATGGAGAAGGATGGGGAAGTGTTTTTGAGCTTATTGAAGCTGTTGTTGAAGATCCTCCCCCCTCTGCTCCATCTGATCAATTTTCTCCAGAGTTCTGCTCATTTATATCAGCATGCTTAAAGAAAGATCCAAAGGATAGATTGTCAGCTCAAGAACTTATGAGACATTCATTTATCGACTTGTATGAGGACTTGGATGTGGATCTTTCAGCTTACTTCTCCAATGCAGGATCTCCACTTGCAACATTATCAAACTTGGAGTCTGCGGATTAG 1089 0.4151 MKKGSLGPSLKLTVPPSDQASFANFLTASGTFKDGDLLVNRDGVRIVSQGEVEAPPPIRPLDNQLSLDDIVTIKVVGKGSGGIVQLVQHKWTNQFFALKVIQMNIEESMRKQIAQELKINQSAQCPYVVVCYQSSYENGVISIILEYMDGGSLEDLLKKVKTIPEAYLAAICKQVLKGLMYLHHEKHIIHRDLKPSNLLINHRGEVKITDFGVSAIMETTSGQANTFIGTYNYMSPERINGFQRGYNYKSDIWSLGLILLECAIGRFPYMPPDGEGWGSVFELIEAVVEDPPPSAPSDQFSPEFCSFISACLKKDPKDRLSAQELMRHSFIDLYEDLDVDLSAYFSNAGSPLATLSNLESAD 362
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa02g1598 362 CDD PKc_MAPKK_plant_like 68 331 - -
Bisa02g1598 362 ProSitePatterns Protein kinases ATP-binding region signature. 76 99 IPR017441 GO:0005524
Bisa02g1598 362 FunFam Mitogen-activated protein kinase kinase 6 151 350 - -
Bisa02g1598 362 SUPERFAMILY Protein kinase-like (PK-like) 55 334 IPR011009 -
Bisa02g1598 362 SMART serkin_6 70 331 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa02g1598 362 Gene3D Phosphorylase Kinase; domain 1 56 149 - -
Bisa02g1598 362 Pfam Protein kinase domain 72 331 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa02g1598 362 Gene3D Transferase(Phosphotransferase) domain 1 150 353 - -
Bisa02g1598 362 PANTHER DUAL SPECIFICITY MITOGEN-ACTIVATED PROTEIN KINASE KINASE 5-RELATED 57 348 - -
Bisa02g1598 362 ProSiteProfiles Protein kinase domain profile. 70 331 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa02g1598 362 FunFam Mitogen-activated protein kinase kinase 6 40 149 - -
Bisa02g1598 362 ProSitePatterns Serine/Threonine protein kinases active-site signature. 188 200 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa02g1598 Bisa-ChrBisa02 28292717 28304137 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa02g1598 27 357 MAP Kinase Kinase Gene Family AT4G26070 67.771 1.87e-170 476
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE7 Bisa02g1598 Pkinase 1.2e-67 CL0016
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bisa02g1598 02 28292717 28304137 Bisa02g1598 02 28292717 28304137 ECH