Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa02g1597 ATGGCAAACACTACAACTTCGATATTGAATCCTGCAATGGAGAATTGTGATAATCAGAGAAATTTTAGTCCACATCATCAGATTACAGTATCTGCAGAGGAGAAGGAGAACCAGGTTGGAGATGATGCTCTTGTTTCTGATTTGATCACAAGGTGTGACAGAAATTGGGTCTGGAATGAAACCCATCATGAGAAAAACAAGGAAGATAATTCAAGCTCTCAATCCGATCATAGCAGTTTCTGTGGGGATCAGTCTTTAACTTCGAAGACTGATTGTTCTGAACTTGCTTCACCAATTACCATCAAGGTTGAAGATGATATAGCAGAAAACTTAGTGCAGAAAATGGTTTATGTTGCAATAAATCTCGAGAATGAAGATGGCATCGCAGCAGATGGGTGTGATCCTAAACCATTAGATTCAGTTCTTGTGATGTCAGAGGAGAAAATATGCAGAAGGAGCTGCCATAATGGCTTGGAATTGAGTAGTGAACCCCTCTGGGGGTTTTCATCAATTTGTGGAAGGAGAAAGGAGATGGAAGATGCCATAGCTGTTGATCCTCAACTCTTGGAAGTCCCTTCACGGATGCTAATGGAGGATCATGTGAAGGAAAACTCAAAATACTCAGAAGCCCACTTTTTTGGCGTCTATGATGGACATGGAGGCTGTCAGGTTGCTAATTACTGCCGGAAGCGCCTGCATTCAGTGTTGATTGAGGAGATAGAGGCTGCAGAATCAAGGACGGATGAAAGGAATGCAGGACACAGTTGGCAGCAGGACCAGTGGACGAGAGCGTTCTGCAAATGTTTTCAGAGAATTGATGAGGAGGTTGAGGGGAAAAGAGCAGCTAATAATGAAGACATCAGCCATGGATCAGAGTGTAGCATTGAACCTCTTGCTCCAGAAACCGTTGGTTCTACTGCTGTGGTTGCCATTTTAAGTGAAACCCACATAATAGTTGCAAATTGTGGGGATTCAAGAACAGTCTTGTGTCGTGGAAAACAGGCCCTCCCTTTGTCTTCTGACCATAAACCAAATAGGGAGGATGAGCGGGCAAGGATTGAAGCTGCAGGAGGAAGAGTCATACGTTGGAATGGGTACAGAGTTATTGGTGTTTTGGCAGTGTCGAGGTCCATAGGTGATAGATACTTGAAACCATGGGTAATTCCAGAGCCAGAGGTCAAGTTTGTAGTTAGAGAGAAAAATGATGAGTGTCTTATTCTAGCCAGCGATGGCTTATGGGATGTGATGACTAATGAAGAAGCCTGCCAAACTGCAAGAAACAGAATTCTTGTTTGGCACAAGAAGTATGGCAATGGCAACAATGGAGGATCTGCAGAAGAAGAAGAAGAAGAAAAAGAGGGAGTTGATCCAGCTGCTCATTATGCCGCACAGTGTCTATGTGGACTTGCCCTCCAAAGGGGAAGTAAAGATAATATCTCTGTTATTGTGGTAGACTTGAAGCCTCAAAGAAAACTTAAGAGAAGGGCATAG 1491 0.4339 MANTTTSILNPAMENCDNQRNFSPHHQITVSAEEKENQVGDDALVSDLITRCDRNWVWNETHHEKNKEDNSSSQSDHSSFCGDQSLTSKTDCSELASPITIKVEDDIAENLVQKMVYVAINLENEDGIAADGCDPKPLDSVLVMSEEKICRRSCHNGLELSSEPLWGFSSICGRRKEMEDAIAVDPQLLEVPSRMLMEDHVKENSKYSEAHFFGVYDGHGGCQVANYCRKRLHSVLIEEIEAAESRTDERNAGHSWQQDQWTRAFCKCFQRIDEEVEGKRAANNEDISHGSECSIEPLAPETVGSTAVVAILSETHIIVANCGDSRTVLCRGKQALPLSSDHKPNREDERARIEAAGGRVIRWNGYRVIGVLAVSRSIGDRYLKPWVIPEPEVKFVVREKNDECLILASDGLWDVMTNEEACQTARNRILVWHKKYGNGNNGGSAEEEEEEKEGVDPAAHYAAQCLCGLALQRGSKDNISVIVVDLKPQRKLKRRA 496
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa02g1597 496 ProSiteProfiles PPM-type phosphatase domain profile. 165 486 IPR001932 -
Bisa02g1597 496 MobiDBLite consensus disorder prediction 1 22 - -
Bisa02g1597 496 MobiDBLite consensus disorder prediction 63 82 - -
Bisa02g1597 496 PANTHER PROTEIN PHOSPHATASE 84 486 IPR015655 GO:0004722|GO:0006470
Bisa02g1597 496 FunFam Protein phosphatase 2C 51 159 494 - -
Bisa02g1597 496 ProSitePatterns PPM-type phosphatase domain signature. 212 220 IPR000222 GO:0043169
Bisa02g1597 496 CDD PP2Cc 167 486 IPR001932 -
Bisa02g1597 496 Gene3D - 154 496 IPR036457 -
Bisa02g1597 496 SMART PP2C_SIG_2 196 486 IPR001932 -
Bisa02g1597 496 SUPERFAMILY PP2C-like 165 488 IPR036457 -
Bisa02g1597 496 SMART PP2C_4 155 484 IPR001932 -
Bisa02g1597 496 Pfam Protein phosphatase 2C 168 479 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa02g1597 Bisa-ChrBisa02 28287207 28291680 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa02g1597 143 495 PP2C-type Phosphatase Gene Family AT4G26080 56.497 2.19e-131 386
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bisa08g1317 08 27026319 27028794 Bisa02g1597 02 28287207 28291680 CCT