Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa02g1583 ATGTCATCGTCAGGTGTAATCGTTTGGAGCTATGAAGAAGAGAAGGCGTTTGAGAATGCCATCGCGATGCATTGGATTGAGGAAGACTCAGAGGAGCAATGGGAGAAGATTGCCTCTGCTGTTCCCAGCAAAAGCATCGAGGAGCTGAAGCAACATTATCAATTTCTGTTAGACGATGTGAGTGCAATAGAGGCAGGTCATATTCCTCTTCCCAATTATGCTGGAGGAGAAGAAGCTACATCTTCAAATAAGGAATTGCATGCTTCTTCCAAGGTTTCCTCTTCAGATAAGAGATCCAATTCCAATTTTCGAAGTGGGTTTTCTGGGTTTGGTCAGGACTCCACTGGGCACAGTGGTAAAGCAGGAGGAGGCTCTTCAAGATCTTCAGAACAAGAAAGGCGAAAAGGGATTCCTTGGACAGAAGAAGAGCATAGATTGTTTCTACTTGGTCTTGACAAATTTGGAAAGGGAGATTGGAGGAGCATATCAAGGAACTTTGTGATGTCCAGGACCCCAACTCAAGTGGCAAGCCATGCACAGAAGTACTTCATTAGGTTGAACTCCATGAACAGAGATAGAAGGAGGTCTAGCATCCATGACATAACCAGTGTGAACAACGGAGAGGTGGCCACTAACCAGGCTCCAATCACAGGGCAGCACTCAAGCTCAACCCCTTCAAGCACAATGGGTGTGGCTCAGTCTGTGAAGCATAGGGCTCATCAACCCCATATGCCCACTGGCTTGGGGATGTACGGACCACCAGTGGGACGCCCAGTAGCTGCTCCTCCTGGCCATATGGCTTCTGCTGTAGGGACCCCTGTGATGCTTCCTCCTGGACCCCATGCTCATGCTCATCCTCCTTATGTTGTTCCACTAGCTTACCCTATGGCATCTCCTACAATGCACAGATAA 912 0.4814 MSSSGVIVWSYEEEKAFENAIAMHWIEEDSEEQWEKIASAVPSKSIEELKQHYQFLLDDVSAIEAGHIPLPNYAGGEEATSSNKELHASSKVSSSDKRSNSNFRSGFSGFGQDSTGHSGKAGGGSSRSSEQERRKGIPWTEEEHRLFLLGLDKFGKGDWRSISRNFVMSRTPTQVASHAQKYFIRLNSMNRDRRRSSIHDITSVNNGEVATNQAPITGQHSSSTPSSTMGVAQSVKHRAHQPHMPTGLGMYGPPVGRPVAAPPGHMASAVGTPVMLPPGPHAHAHPPYVVPLAYPMASPTMHR 303
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa02g1583 303 CDD SANT 9 57 IPR001005 -
Bisa02g1583 303 SUPERFAMILY Homeodomain-like 133 188 IPR009057 -
Bisa02g1583 303 MobiDBLite consensus disorder prediction 76 126 - -
Bisa02g1583 303 Gene3D - 4 70 - -
Bisa02g1583 303 CDD SANT 138 183 IPR001005 -
Bisa02g1583 303 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 131 187 IPR017930 -
Bisa02g1583 303 PANTHER TRANSCRIPTION FACTOR KUA1 5 296 - -
Bisa02g1583 303 ProSiteProfiles Myb-like domain profile. 9 57 IPR001005 -
Bisa02g1583 303 ProSiteProfiles Myb-like domain profile. 131 183 IPR001005 -
Bisa02g1583 303 FunFam transcription factor MYB1R1 137 188 - -
Bisa02g1583 303 Gene3D - 137 189 - -
Bisa02g1583 303 ProSiteProfiles SANT domain profile. 139 187 IPR017884 -
Bisa02g1583 303 SMART sant 5 59 IPR001005 -
Bisa02g1583 303 SMART sant 135 185 IPR001005 -
Bisa02g1583 303 MobiDBLite consensus disorder prediction 74 138 - -
Bisa02g1583 303 NCBIfam myb-like DNA-binding domain, SHAQKYF class 135 185 IPR006447 GO:0003677
Bisa02g1583 303 SUPERFAMILY Homeodomain-like 8 61 IPR009057 -
Bisa02g1583 303 FunFam Transcription factor SRM1 1 70 - -
Bisa02g1583 303 Pfam Myb-like DNA-binding domain 9 56 IPR001005 -
Bisa02g1583 303 Pfam Myb-like DNA-binding domain 138 183 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa02g1583 Bisa-ChrBisa02 27912259 27913517 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Bisa02g1583 Myb_DNA-binding 4.3e-06 CL0123