Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa02g1578 ATGTTTCCTTCTTCAACTTCAGACCCTTTTCTCTTTGACACCGACCTCACTACTTCCAAGCACCAAACCCTCCCTCCTCCTCCTCCTCCTTTCTCCTTCTTCCACTTCGAAGACCATGAACAAAACCAAATCTTCCTCCCAAACTCACAAAACCATATTCATAATCATGACCTCTTGCTTCATCAGACTTTATCTCTAGCTGAAGAAGCTGGTGGTGGGGACTTCATGGAGGGAATGAAGGAGCAGATCTCAGGGAGGAGTAAGAGGATTTGCAAGAGAGATCGTCACAGCAAGATTAAGACTGCTAAAGGGCTGAGGGATCGAAGAATGAGGCTGTCACTTGAGGTGGCAAAGAGGTTCTTTGGACTTCAAGACATGCTTGGGTTTGACAAAGCCAGCAAAACTGTGGAGTGGCTGCTCAATCAGTCAAAGGACAAGATCAAGCAGCTTGCAATAGAGAAGAATTATAGCAATAATAATATTATTAATAGCAATTGCTGTGTGGTGAAGAGTGCATCTTCAAGTTCAGAATGTGAAGGGGCTTCTGGTTTGGACGAGGTGGCATTTATTAATGGAGAGCAAGAGCAAGAGGCAGAGCCCTTGTTGGTGAAGAGAAGGGCCGCGAAGGGCGGTCGAAAGTTATTAGCACACCCTATAGTTGCAAGGGAGTCGAGGGAGAAGGCGAGGGAGAGGGCGAGGGAGAGGACGAGGGAGAAGGAGAGGATGAAGATGATGAAGAGTCGCAAATTGTTACCACCACCACCTGGTGACACAACACACCAACACCATCATCATCATAGCTGTAACCTCACCCAATTTGGCTCTTGGAATCCCTTTGAAACAGTAGCAGAAGAAGAATATAATTCTGGCTGCGGTACACAGAATCAAAAGCCAAATAATATTCCTAATTCCTGCTTGGATGGGATGGATGAGGCTGCTGATCAAGAACAGCCAAGTTCCGAAGCAAAGGATGATGATTCTTTGGTGCTCAACATGAGCAAATGGAACCCTTCTGTGATTCTCAGCTCATTCAATACCTCAGCATTCCTACAAGAAGTAAGTTGA 1065 0.4582 MFPSSTSDPFLFDTDLTTSKHQTLPPPPPPFSFFHFEDHEQNQIFLPNSQNHIHNHDLLLHQTLSLAEEAGGGDFMEGMKEQISGRSKRICKRDRHSKIKTAKGLRDRRMRLSLEVAKRFFGLQDMLGFDKASKTVEWLLNQSKDKIKQLAIEKNYSNNNIINSNCCVVKSASSSSECEGASGLDEVAFINGEQEQEAEPLLVKRRAAKGGRKLLAHPIVARESREKARERARERTREKERMKMMKSRKLLPPPPGDTTHQHHHHHSCNLTQFGSWNPFETVAEEEYNSGCGTQNQKPNNIPNSCLDGMDEAADQEQPSSEAKDDDSLVLNMSKWNPSVILSSFNTSAFLQEVS 354
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa02g1578 354 ProSiteProfiles R domain profile. 222 239 IPR017888 -
Bisa02g1578 354 MobiDBLite consensus disorder prediction 220 266 - -
Bisa02g1578 354 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 84 307 IPR005333 GO:0003700
Bisa02g1578 354 MobiDBLite consensus disorder prediction 287 303 - -
Bisa02g1578 354 ProSiteProfiles TCP domain profile. 92 150 IPR017887 -
Bisa02g1578 354 MobiDBLite consensus disorder prediction 220 247 - -
Bisa02g1578 354 MobiDBLite consensus disorder prediction 287 328 - -
Bisa02g1578 354 Pfam TCP family transcription factor 92 243 IPR017887 -
Bisa02g1578 354 Coils Coil 225 245 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa02g1578 Bisa-ChrBisa02 27742420 27743484 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa02g1578 28 236 TCP Transcription Factor Family AT3G18550 37.603 1.87e-28 113
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF TCP Bisa02g1578 TCP 1.6e-44 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bisa02g1578 02 27742420 27743484 Bisa02g1578 02 27742420 27743484 ECH