Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa02g1566 ATGTCGTCGTTAACGCTTCTCGGGCACTGTAAAAGGATGGATCCGATGGACATCATTGGCAAATCAAAGGAAGATGCTTCCCTTCCTAAAGCGACCATGACAAAAATTATTAAAGAGATGTTACCCCCCGATGTACGAGTTGCAAGAGATGCTCAAGATCTATTGATTGACTGTTGTGTAGAGTTTATAAACCTCATTTCATCAGAGTCCAATGAAGTCTGTAACAGAGAGGATAAACGGACAATTGCACCAGAGCATGTGTTGAAGGCTTTGGAGGTTCTTGGATTTGGTGAGTACATTGAGGAAGTTTATGCAGCATACGAGCAGCATAAGATTGAAGCCATGCAGGATTCTTTAAGAGGTGGCAAGTGGAGCAATGGAGCTGAGATGACTGAGGAAGAAGCATTAGTGGAGCAGCAAAGGATGTTTGCAGAGGCGCGTGCTAGAATGAATGGTGGGGCCATTGCTTCCAAGCAGCCAGATGCTGACCAAACGTTAGAGAGCTAA 507 0.4477 MSSLTLLGHCKRMDPMDIIGKSKEDASLPKATMTKIIKEMLPPDVRVARDAQDLLIDCCVEFINLISSESNEVCNREDKRTIAPEHVLKALEVLGFGEYIEEVYAAYEQHKIEAMQDSLRGGKWSNGAEMTEEEALVEQQRMFAEARARMNGGAIASKQPDADQTLES 168
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa02g1566 168 Gene3D Histone, subunit A 16 155 IPR009072 GO:0046982
Bisa02g1566 168 PANTHER PROTEIN DR1 HOMOLOG 13 167 IPR044255 -
Bisa02g1566 168 Pfam Histone-like transcription factor (CBF/NF-Y) and archaeal histone 26 91 IPR003958 -
Bisa02g1566 168 SUPERFAMILY Histone-fold 24 155 IPR009072 GO:0046982
Bisa02g1566 168 FunFam Negative cofactor 2 beta 18 155 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa02g1566 Bisa-ChrBisa02 27555406 27559399 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa02g1566 13 165 CCAAT-DR1 Transcription Factor Family AT5G23090 83.007 6.28e-94 268
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NF-YB Bisa02g1566 CBFD_NFYB_HMF 1e-21 CL0012