Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa02g1553 ATGAGACTGCAAGAACGAATCTGGCGGGAAATGGAGCTAAGCGTTGAGGGTTGGGCGCAGAGAGGGGGCGAGAGAGAGAGAGAGATGGGGAGCGATAGCGAAGCCGAAAAGTCGGCGCAGAAAGAGAAGGAGAGGAAGAAGATGCTCGCCTTGTGTCCAATTGCCAAACCCCTGGCTGGGAAGAAGCTTTGCAAGCGAACTCTGAAGCTTGTTCGTAGAGCTGCTGAACACAAGTGCTTAAAGAGAGGAGTAAAGGAGGTGGTTAAAAGCATTAAGCGTGGTCATAAAGGATTATGTGTTATAGCTGGGAACATAACACCTATTGATGTCATTACTCATGTCCCTGTCCTATGTGAAGAGGCTGATATTCCATACATATATGTCCCATCAAAACAAGACCTTGCGATTGCAGGAGTAACAAAGAAGCCAACTTGCTGTGTTTTGGTGATGACCAAGCGTACAAAGGGGGAACTAGATCAAGGAGAACAAGAAAAACTAAAGTCAGATTATGATCAAGTTGTATCTGATGTTAAGGAGGTTACAGCTTCTCTTTTTTGA 558 0.4552 MRLQERIWREMELSVEGWAQRGGEREREMGSDSEAEKSAQKEKERKKMLALCPIAKPLAGKKLCKRTLKLVRRAAEHKCLKRGVKEVVKSIKRGHKGLCVIAGNITPIDVITHVPVLCEEADIPYIYVPSKQDLAIAGVTKKPTCCVLVMTKRTKGELDQGEQEKLKSDYDQVVSDVKEVTASLF 185
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa02g1553 185 Gene3D - 45 180 IPR029064 -
Bisa02g1553 185 FunFam H/ACA ribonucleoprotein complex subunit NHP2 48 180 - -
Bisa02g1553 185 Pfam Ribosomal protein L7Ae/L30e/S12e/Gadd45 family 68 153 IPR004038 -
Bisa02g1553 185 PRINTS High mobility group-like nuclear protein signature 66 81 IPR002415 GO:0003723|GO:0005730
Bisa02g1553 185 PRINTS High mobility group-like nuclear protein signature 127 139 IPR002415 GO:0003723|GO:0005730
Bisa02g1553 185 PRINTS High mobility group-like nuclear protein signature 53 66 IPR002415 GO:0003723|GO:0005730
Bisa02g1553 185 PRINTS High mobility group-like nuclear protein signature 83 93 IPR002415 GO:0003723|GO:0005730
Bisa02g1553 185 MobiDBLite consensus disorder prediction 19 40 - -
Bisa02g1553 185 PANTHER RIBOSOMAL PROTEIN L7AE FAMILY MEMBER 38 178 - -
Bisa02g1553 185 PRINTS Ribosomal protein L7A/RS6 family signature 115 125 IPR018492 -
Bisa02g1553 185 PRINTS Ribosomal protein L7A/RS6 family signature 80 94 IPR018492 -
Bisa02g1553 185 PRINTS Ribosomal protein L7A/RS6 family signature 99 112 IPR018492 -
Bisa02g1553 185 PRINTS Ribosomal protein L7A/RS6 family signature 125 139 IPR018492 -
Bisa02g1553 185 SUPERFAMILY L30e-like 49 159 IPR029064 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa02g1553 Bisa-ChrBisa02 27264600 27267009 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa02g1553 80 171 Cytoplasmic Ribosomal Protein Gene Family AT2G47610 27.957 1.61e-06 45.1