Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa02g1549 ATGCTGAAAATGGACTATGGAGATGGCTACCCAAGCAATTGGGTTCGTCTCTGCGACACTTGCAGAGTCTCTGCTTCGACCCTTTACTGCCACACTGATTCGGCTTTTCTCTGCTCTTCCTGTGACGAACAAATCCACGCGCTGGGGTCTCCTTGTTGGCCCCACCACCGGGTGATAATTTGCGGCGCGTGTGAGAACGCTCCGGCTGCTTTCACTTGCAAAGCCGATGACGCTTCACTCTGCATCAACTGTGACTTCGAGATTCACTCTGCGAACAGCATCGCTAGCCGACACAACAGGGTCCCTGTGTCTCCCCTGTCTCACGTGCTCAACGAGAACATTACTACAGAGGACAGGCCTAGTTACGAGGTTGTCGATAACAATAAAAGTAGCAAGGAAATGGATGAAAGAGAAGCTGATTCGTGGTTGCTGCTTGATTCTGAGACAATAGACAGCAAGGCTGATGGTGGGTTTATGTTCGGGGAAGCCGAGGATGATCATCGCAGGCGCGTGGGGGTTGTGGTGGAGTGTGATTCATCCTCCAAGTTTCAAAATTTTCAGGACGATCAAGATCAGGAGCAGCAAGATTACAGCTTTTCCAATGAAAATGACAGTGTCGTGCCAATTCAATCTTTTGAAACGCAGCCACAGCAACTACAGCAACAGCAGCAGAATATCTACTTCAATATGGAGCATGATCCACCGAGAATGGCCATCACTAATTATCCCTCAAATTGCCGAAGTGTTGGTGTGCCATATATGGATGCGCACGTTTTGCAAATGGGGAAGATGTTTGCGAACCCTTCAGTTTCAATGCAAATCCAGTTTGGGCAGATGAGCAGGAAAGCTGGGGTTGAAAAATACAGAGAAAAGAAGAAGTCGAGGAAGTTCGAGAAGAGAATAAGATATGCGTACAGGAAAGCCTACGCTGAGAAACGACCTAGGGTTAAGGGCAGATTTGCAAAGAGAGAAGACTTAACCTCAGAAGGGTCTCTTCCTCTCAACTGA 1008 0.4812 MLKMDYGDGYPSNWVRLCDTCRVSASTLYCHTDSAFLCSSCDEQIHALGSPCWPHHRVIICGACENAPAAFTCKADDASLCINCDFEIHSANSIASRHNRVPVSPLSHVLNENITTEDRPSYEVVDNNKSSKEMDEREADSWLLLDSETIDSKADGGFMFGEAEDDHRRRVGVVVECDSSSKFQNFQDDQDQEQQDYSFSNENDSVVPIQSFETQPQQLQQQQQNIYFNMEHDPPRMAITNYPSNCRSVGVPYMDAHVLQMGKMFANPSVSMQIQFGQMSRKAGVEKYREKKKSRKFEKRIRYAYRKAYAEKRPRVKGRFAKREDLTSEGSLPLN 335
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa02g1549 335 ProSiteProfiles Zinc finger B-box type profile. 56 103 IPR000315 GO:0008270
Bisa02g1549 335 Pfam CCT motif 281 323 IPR010402 GO:0005515
Bisa02g1549 335 ProSiteProfiles CCT domain profile. 281 323 IPR010402 GO:0005515
Bisa02g1549 335 PANTHER ZINC FINGER PROTEIN CONSTANS-LIKE 4 18 325 IPR045281 GO:0009909
Bisa02g1549 335 Pfam B-box zinc finger 59 103 IPR000315 GO:0008270
Bisa02g1549 335 CDD Bbox1_BBX-like 17 58 - -
Bisa02g1549 335 CDD Bbox1_BBX-like 60 103 - -
Bisa02g1549 335 ProSiteProfiles Zinc finger B-box type profile. 13 61 IPR000315 GO:0008270
Bisa02g1549 335 MobiDBLite consensus disorder prediction 314 335 - -
Bisa02g1549 335 SMART bboxneu5 56 103 IPR000315 GO:0008270
Bisa02g1549 335 SMART bboxneu5 13 51 IPR000315 GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa02g1549 Bisa-ChrBisa02 27144660 27150107 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa02g1549 1 323 C2C2-CO-like Transcription Factor Family AT3G02380 40.751 5.00e-68 215
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-CO-like Bisa02g1549 zf-B_box 5.2e-07 No_clan