Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa02g1544 ATGAGCTTGAGCTTTGCGAGAATGCGAGCGAGAACAGGAAAGGCAGTGATGAAGAGGGCGACATCGAGGAACAAGATTCTCACTCTTCATCACGAAGGTGATGACTCTTCCTCCCTCGTCACAGAAATGTCGAAGCTGCTTTTGCACAGCTCTCATCTCACCTCCGTTCACCGATGCACCACCCTTTCTCCCTTCTCTACCTTTACCGCCCCCCTTGCTAGCCTCCGTTTTCGAAGCCGCTTCTCGGTTTCGGTTTCTTCTCTTTCGCATCCTAAACGTCTACCTTTCTTTCAGTGCCATAGAGACCTATCAGTTCGTGCCTTCGAATCTTCACCTTCCGAGACTAAAGGCGAGGAAGAAGCTGTAGACGAGCTGGTGGGAAAGGATGCGATTACTGATCAAAATGTCAGAATTGCCGACGAGGATTATCCGAGCGGTGAGTTTGAATTTGAACCCATTACGGGGTGGAGAAGATTTCTTGTTAAGCTTAAGATGCTGGTTGCGTTCCCTTGGGAGCGTGTCCGCAAGGGCAGTGTTCTCACAATGAAGTTGCGCGGCCAGATTTCCGATCAGTTAAAGAGTAGTTTCTCTCGGGGATTATCTGTACCTCAAATTTGTGAGAACTTTTTGAAAGCAGCATATGATCCTCGTATTGCTGGCATCTATCTCCATATTGATGTTTTGAATTGTGGGTGGGGTAAAGTTGAAGAAATTCGAAGGCATATATCGAATTTCAAAAAATCAGGAAAATTTGTTGTGGCTTATCTCCCTTCATGTCAAGAAAAAGAATACTACCTTGCCTGTGCTTGTGATGAGATATATGCCCCTCCAAGTGCCTATTTTTCTTTGTTTGGCTTGACCGTTCAAGCTTCATTCCTCAGAGGAGTTTTAGACAGCATAGGAATTGAACCACAGGTAGAAAGGATTGGCAAATACAAAAGTGCAGGGGATCAACTAGCCCGTAGAACCATTTCTGAAGCAAATTGTGAGATGTTGACTGCATTGCTTGATAATATCTATGAAAATTGGCTGGACAAAATCTCTTCTGCAAAAGGGAAAAAAAGAGAAGATATTGAGAACTTTATAAATGAAGGAGTTTATCGAGTAGACAAACTGAAAGAACAGGGCTTCATAACAAACATAACCTACGACGATGAGGTTATTTCCATGTTGAAAGAGAGACTTGGAGTGAAAACAGATAAAAACCTTCCTATGGTGGATTACAGAAGATACTCCAGAGTTAGAAAATGGACCCTTGGAATATCAGGTGGTAAAGACTTGATAGCCCTCATCCGAGCCTCAGGGAGTATTAGTCGCATTGAGGGTCCATTAAGTGTGTCAGGCTCAGGTATTATTGGAGAGAAGTTTATTGAGAAGATTCGCAGTGTGAGAGAGTCCAAAAGATACAAGGCTGCTATTATCCGAATTGACAGTCCTGGAGGTGATGCTCTTGCATCTGATTTGATGTGGAGAGAAATCAGACTTTTGGCTGCCTCAAAACCAGTCATTGCTTCAATGTCTGATGTGGCAGCGAGTGGTGGCTACTATATGGCAATGGCAGCAGGAGCTATTGTTGCAGAAAGCCTCACTTTGACTGGTTCAATTGGAGTGGTCACAGGAAAATTTAACCTGGAGAAACTATACGAGAAGATTGGATTCAACAAGGAAATCATATCAAGGGGAAGATATGCTGAGCTCCTTGCTGCAGAACAACGTCCTTTTAGACCGGATGAAGCAGAGTTATTCGCCAAGTCTGCACAGCATGCTTACAAACAATTTCGAGATAAGGCAGCATTTTCCAGATCGATGACTGTAGATAAGATGGAGGAGGTTGCACAGGGAAGAGTTTGGACTGGTAAAGATGCTGCTTCACGTGGTTTGGTTGATGCTATTGGTGGGCTTTCACGTGCAATCGCCATAGCAAAATTGAAGGCCAATATACCTCAAGACAAACTGGTTACAATTGTGGAGCTGTCAAGACCCAGCCCTTCTCCACCAGAGATTTTAAGTGGCATTGGGAGTACTCTAGTTGGAGCAGACAGAACATTGAAGGAGCTGTTACAAGGCTTGACATTTTCTGATGGAGTTCAAGCCCGGATGGATGGGATCATGTTTGAGAGATTGGAAGGATATCCTTACGCCAACCCCATTTTGACATTGATAAAAGATTACCTTAGTTCTCTGTAG 2187 0.4399 MSLSFARMRARTGKAVMKRATSRNKILTLHHEGDDSSSLVTEMSKLLLHSSHLTSVHRCTTLSPFSTFTAPLASLRFRSRFSVSVSSLSHPKRLPFFQCHRDLSVRAFESSPSETKGEEEAVDELVGKDAITDQNVRIADEDYPSGEFEFEPITGWRRFLVKLKMLVAFPWERVRKGSVLTMKLRGQISDQLKSSFSRGLSVPQICENFLKAAYDPRIAGIYLHIDVLNCGWGKVEEIRRHISNFKKSGKFVVAYLPSCQEKEYYLACACDEIYAPPSAYFSLFGLTVQASFLRGVLDSIGIEPQVERIGKYKSAGDQLARRTISEANCEMLTALLDNIYENWLDKISSAKGKKREDIENFINEGVYRVDKLKEQGFITNITYDDEVISMLKERLGVKTDKNLPMVDYRRYSRVRKWTLGISGGKDLIALIRASGSISRIEGPLSVSGSGIIGEKFIEKIRSVRESKRYKAAIIRIDSPGGDALASDLMWREIRLLAASKPVIASMSDVAASGGYYMAMAAGAIVAESLTLTGSIGVVTGKFNLEKLYEKIGFNKEIISRGRYAELLAAEQRPFRPDEAELFAKSAQHAYKQFRDKAAFSRSMTVDKMEEVAQGRVWTGKDAASRGLVDAIGGLSRAIAIAKLKANIPQDKLVTIVELSRPSPSPPEILSGIGSTLVGADRTLKELLQGLTFSDGVQARMDGIMFERLEGYPYANPILTLIKDYLSSL 728
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa02g1544 728 CDD S49_SppA_67K_type 180 393 IPR047217 -
Bisa02g1544 728 Gene3D - 423 569 - -
Bisa02g1544 728 SUPERFAMILY ClpP/crotonase 452 633 IPR029045 -
Bisa02g1544 728 Gene3D - 177 413 - -
Bisa02g1544 728 SUPERFAMILY ClpP/crotonase 169 385 IPR029045 -
Bisa02g1544 728 Gene3D - 570 697 - -
Bisa02g1544 728 Pfam Peptidase family S49 496 646 IPR002142 GO:0006508|GO:0008233
Bisa02g1544 728 Pfam Peptidase family S49 245 397 IPR002142 GO:0006508|GO:0008233
Bisa02g1544 728 CDD S49_Sppa_N_C 428 642 IPR047272 -
Bisa02g1544 728 PANTHER PROTEASE 4 133 727 - -
Bisa02g1544 728 NCBIfam signal peptide peptidase SppA 451 641 IPR004635 GO:0006508|GO:0008233
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa02g1544 Bisa-ChrBisa02 26885589 26904030 Dispersed/Wgd