Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa02g1536 ATGGAGCTTCCTCAGGCGCGTCCCTTTGGAACCGAAGGAAGGAAACCGACGCATGATTTTCTGTCACTGTACAGTCATTCAACTGCCCAACAAGATCCGAGGCCACATTCTCAAGGAAGTTACCTCAAAACCCATGATTTCTTGCAGCCACTAGAACGGGTAGAGAGGAAAGCGAATGCAAAGGAAGAAGCATCAGATGAAATATCATCAGTGGTTCAAAAGCCACCACCTCCTGCACCACCACCATCTGTTGAGCACATCCTACCTGGAGGCATTGGGACTTACAGTATTAGCCACATATCTTATTTTACTAATCACAGGGTTCCAAAGCCCGAGGCACCCCATTTCACTGTGGCTCCTCATGAACCTAATCCGGACAGAAATGAGGAGAGCTCCAACTGCAGTTCATATGCTGGAAGTGGTTTCACTTTGTGGGAAGAGTCTGCAGTTAAGAAGGGAAAGACAGGGAAGGAGAATGATGTGGGAGAGAAACCCATCATAGGAGAGTCTGCAGCAAAGTCAGGGCAGTGGACGCCAACGGAGAGAACGTCTCAGTCGTTTGCCAACAATCATCACAATAGCTTCAACTCTATCACCTCCTCTAACACAACTGGGCAGAAGAATCAGAGTTTTATGGAAATGATAAAGTCCGCCAAGGATTTTGCTCAGGACGAGGAACTAGACCATGAAGAAGCAATCATTTTAAAGAAAGAATCCTCCAATAACTACACAGCGGATTTAAGAGTGAAAGTGGATGGGAAGAGCAGCACTGATCAAAGGCCAAACACACCACGATCAAAACATTCTGCAACAGAGCAGCGCAGAAGGAGCAAGATCAATGACAGATTCCAGATGTTAAGAGAACTTATTCCACATAGTGACCAGAAAAGAGATAAGGCATCTTTTTTGTTAGAGGTCATTGAGTATATTCAATTTTTACAAGAGAAGGTGAATAAGTACGAAGGTTCATACCAAGTTTGGAACCATGAGAAAGAAAAATTGACGCCATGGAGGAATAATAACAGGCCTTTAGAAAGCTATGATGATCAATCTCGTGGCACAAATAGTGGGGCAGGTCCTCCAACATTATTGTTTGCTTCGAAGATTGATGAGAAAAATTTCAGTATTTCCCCAACGATTACTGGAAGCACTAACCACGTAGAAGCTGGCATGAGCACAGCAACTACCTTGAAGGCAATTGATCAACATCCTGGAATTACAAATAAAGCCATGCCATGTCCTAACTCTTTACAGCCAAATCTCTTCAGTCCTGGCCAAAGTGGTGGTCCAGGTGGAGTGGTGTCTCAGCTTACACACAGGCTGGCATCAGATGCAGAAAACACCATATATAAACCCTCAGGGCAATCTCATACTTGTGCTACGGAGGTGATTACTGCTAATGATAAGCTGAAAGAGAAAGAGCTCACTATTGAAGGTGGTGCCATTAGCATATCAACTGTATACTCAAAAGGGTTGTTGGATACACTAACACAAGCGCTGAAGAGTTCAGGAGTGGATTTGTCACAGGCTAGCATCTCAGTGCAAATTGAGCTTGGCAAGCAAGCAAACTTAAGACCAATTATACCAACACCTGCCCCTAAGGATGAAGTTCCTTCTAGCAATCAAGGGATGAAGCGTTCTGCAGCGGCTAGCGTACAAGAGTCTGACCAAGCAGTAAAGAAGCTAAAGACATGCAGAAGGAGGGGGGTCTACTTAAGTCTTCTGTTGGCTTCTTATCCAGCAAGAAGGGTGAGATTGACTGTACATGTAGTGTCGTCCTAG 1782 0.4467 MELPQARPFGTEGRKPTHDFLSLYSHSTAQQDPRPHSQGSYLKTHDFLQPLERVERKANAKEEASDEISSVVQKPPPPAPPPSVEHILPGGIGTYSISHISYFTNHRVPKPEAPHFTVAPHEPNPDRNEESSNCSSYAGSGFTLWEESAVKKGKTGKENDVGEKPIIGESAAKSGQWTPTERTSQSFANNHHNSFNSITSSNTTGQKNQSFMEMIKSAKDFAQDEELDHEEAIILKKESSNNYTADLRVKVDGKSSTDQRPNTPRSKHSATEQRRRSKINDRFQMLRELIPHSDQKRDKASFLLEVIEYIQFLQEKVNKYEGSYQVWNHEKEKLTPWRNNNRPLESYDDQSRGTNSGAGPPTLLFASKIDEKNFSISPTITGSTNHVEAGMSTATTLKAIDQHPGITNKAMPCPNSLQPNLFSPGQSGGPGGVVSQLTHRLASDAENTIYKPSGQSHTCATEVITANDKLKEKELTIEGGAISISTVYSKGLLDTLTQALKSSGVDLSQASISVQIELGKQANLRPIIPTPAPKDEVPSSNQGMKRSAAASVQESDQAVKKLKTCRRRGVYLSLLLASYPARRVRLTVHVVSS 593
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa02g1536 593 MobiDBLite consensus disorder prediction 173 206 - -
Bisa02g1536 593 MobiDBLite consensus disorder prediction 336 363 - -
Bisa02g1536 593 MobiDBLite consensus disorder prediction 113 136 - -
Bisa02g1536 593 SMART finulus 269 319 IPR011598 GO:0046983
Bisa02g1536 593 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 261 334 IPR036638 GO:0046983
Bisa02g1536 593 MobiDBLite consensus disorder prediction 21 44 - -
Bisa02g1536 593 MobiDBLite consensus disorder prediction 48 68 - -
Bisa02g1536 593 PANTHER BES1-INTERACTING MYC-LIKE PROTEIN 11 564 IPR044295 GO:0003700|GO:0006351|GO:0046983
Bisa02g1536 593 MobiDBLite consensus disorder prediction 265 279 - -
Bisa02g1536 593 MobiDBLite consensus disorder prediction 535 552 - -
Bisa02g1536 593 FunFam BHLH domain class transcription factor 261 333 - -
Bisa02g1536 593 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 263 313 IPR011598 GO:0046983
Bisa02g1536 593 CDD bHLH_AtBIM_like 262 338 - -
Bisa02g1536 593 Gene3D - 261 335 IPR036638 GO:0046983
Bisa02g1536 593 MobiDBLite consensus disorder prediction 339 361 - -
Bisa02g1536 593 MobiDBLite consensus disorder prediction 152 206 - -
Bisa02g1536 593 MobiDBLite consensus disorder prediction 1 82 - -
Bisa02g1536 593 MobiDBLite consensus disorder prediction 530 552 - -
Bisa02g1536 593 Pfam Helix-loop-helix DNA-binding domain 265 314 IPR011598 GO:0046983
Bisa02g1536 593 MobiDBLite consensus disorder prediction 246 279 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa02g1536 Bisa-ChrBisa02 26815466 26821587 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa02g1536 1 522 Basic Helix-Loop-Helix Transcription Factor Gene Family AT5G08130 51.103 8.01e-132 394
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Bisa02g1536 HLH 2.8e-15 No_clan