Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa02g1524 ATGCGTGGCACAGGTTTGTCTTGTTGGCTGAGATTTCATTTCTTGAGGATGGGGGAGTCGAGAAGCGAAAGAGCTCCTCTCTTGGAGCGCCAAGATGGGGAAAAGAGGGATGATGCCCCAGTGGATCAGCTGACAGACATTGAACATGGTGATGCACTACCGGCTGCAAATGTGGGATTCTGTCGAGTGCTTTCACTTGCAAAGCCTGATGCTGGGAAGTTGGTACTTGCAACATTGGCCCTGTTGCTTGCATCCACAACAAGTATCTTAATTCCAAAATTCGGTGGGAAGATAATTGACATTGTCTCAGGAGATATCCAAACTCCTGAAGAGAAAGCTAGAGCTTTGGATGCTGTCAAGGACACCATACTATCTATCTTTCTGATCGTTATTGTTGGCTCAGTTTGCTCAGCACTTCGAGCATGGCTTTTTTCTTCTGCTAGTGAAAGGGTTGTTGCTCGTATGAGAAAAAGGTTGTTTAGTCACCTTGTTCACCAGGAGATAGCTTTCTTTGATGTTACTCGAACTGGGGAACTTCTAAGTAGACTATCTGAAGATACACAGATCATAAAGAATGCCGCAACTACCAATCTTTCTGAGGCCCTTAGAAACTTATCAACTGCACTTATTGGTCTCTCTTTCATGTTTGTCACATCATGGAAGCTAACATTGTTGGCTTTGGCGGTTGTGCCTGTTGTTTCTGTTGCTGTTCGTAAATTTGGCCGGTACTTGCGTGATCTTTCACATAAAACTCAAGCTGCAGCTGCTGTAGCTTCTTCAATTGCTGAGGAATCCTTTGGTGCTATAAGAACAGTAAGATCTTTTGCCCAAGAAGAATATGAAATAGCACGCTATTCTGAGAAAGTTGAAGAAACCCTTAAGCTTGGACTTAAACAGGCTAAAGTGCTTGGACTCTTTGCTGGAGGCATTGGTGCAGCATCTACACTGTCAGTTATTGTAGTTGTTATATATGGAGCTAATTTGACTATCATGGGTTCCATGTCCACTGGTGATCTCACATCTTTCATTCTTTATAGTCTCACAGTGGGGTCTGCGGTATCTGGTCTGTCATCATTGTATACAGTAACCATGAAAGCTGCAGGTGCTAGCAGACGGGTATTTCAACTTCTGGATCGAGTCTCTTCCTTGCCTAAGTCGGGAAATAAGTGTCCTCTGGGAGATCAGGATGGGAAGGTGGAACTAGATGATGTTTGGTTTGCCTATCCATCGCGTCCTAGTCATATGATACTCAAGGGAATTACATTGAAACTGCAGCCTGGCTCAAAAGTTGCTCTTGTTGGTCCGAGTGGTGGTGGAAAGACTACCATAGCAAACTTGATTGAAAGATTTTATGACCCAACCAAGGGAAAGATTCTGCTGAACGGGGTTCCTCTGGTAGAAATATCACATGAGCATCTGCACAGAAAGATTAGTATAGTGAGTCAGGAGCCAATTCTTTTCAACTGTTCCATAGAGGAGAACATAGCTTATGGACTTGATGGCAAAGTTAATTCAATTGATATAGAAAACGCAGCTAAAATGGCCAATGCACATGAATTTATATCCAAGTTCCCAGACAAATACCAGACGCATGTTGGAGAACGTGGGGTACGGCTTTCAGGAGGGCAGAAGCAGAGAATAGCAATTGCTAGAGCTCTGCTTATGGACCCAAAAATTCTTCTCTTGGATGAAGCCACTAGTGCCCTGGATGCTGAAAGCGAATACCTAGTACAAGATGCCATGGATTCTCTCATGAAGGGAAGGACAGTTCTAGTTATTGCTCATAGGCTATCAACTGTTAAAAGTGCCAATGTTGTGGCAGTTATATCTGATGGTCAAATAGTTGAAAGTGGCACCCATGACGAGCTTCTCAGCAAGAATGGTGTGTATACTGCATTAGTCAGGAGACAACTACAAACAACAAAAACTGAAATCTAG 1938 0.434 MRGTGLSCWLRFHFLRMGESRSERAPLLERQDGEKRDDAPVDQLTDIEHGDALPAANVGFCRVLSLAKPDAGKLVLATLALLLASTTSILIPKFGGKIIDIVSGDIQTPEEKARALDAVKDTILSIFLIVIVGSVCSALRAWLFSSASERVVARMRKRLFSHLVHQEIAFFDVTRTGELLSRLSEDTQIIKNAATTNLSEALRNLSTALIGLSFMFVTSWKLTLLALAVVPVVSVAVRKFGRYLRDLSHKTQAAAAVASSIAEESFGAIRTVRSFAQEEYEIARYSEKVEETLKLGLKQAKVLGLFAGGIGAASTLSVIVVVIYGANLTIMGSMSTGDLTSFILYSLTVGSAVSGLSSLYTVTMKAAGASRRVFQLLDRVSSLPKSGNKCPLGDQDGKVELDDVWFAYPSRPSHMILKGITLKLQPGSKVALVGPSGGGKTTIANLIERFYDPTKGKILLNGVPLVEISHEHLHRKISIVSQEPILFNCSIEENIAYGLDGKVNSIDIENAAKMANAHEFISKFPDKYQTHVGERGVRLSGGQKQRIAIARALLMDPKILLLDEATSALDAESEYLVQDAMDSLMKGRTVLVIAHRLSTVKSANVVAVISDGQIVESGTHDELLSKNGVYTALVRRQLQTTKTEI 645
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa02g1524 645 PIRSF ABC_prm/ATPase_B 15 645 - -
Bisa02g1524 645 Gene3D ABC transporter type 1, transmembrane domain 59 388 IPR036640 GO:0005524|GO:0016020
Bisa02g1524 645 PANTHER ATP-DEPENDENT PERMEASE MDL1, MITOCHONDRIAL 58 642 IPR039421 -
Bisa02g1524 645 SMART AAA_5 426 620 IPR003593 GO:0016887
Bisa02g1524 645 ProSitePatterns ABC transporters family signature. 539 553 IPR017871 GO:0005524|GO:0016887
Bisa02g1524 645 Pfam ABC transporter 417 567 IPR003439 GO:0005524
Bisa02g1524 645 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 399 636 IPR003439 GO:0005524
Bisa02g1524 645 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 390 637 IPR027417 -
Bisa02g1524 645 Gene3D - 393 644 IPR027417 -
Bisa02g1524 645 FunFam ABC transporter B family member 25 126 396 - -
Bisa02g1524 645 FunFam ABC transporter B family member 25 397 639 - -
Bisa02g1524 645 CDD ABC_MTABC3_MDL1_MDL2 399 637 - -
Bisa02g1524 645 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 75 365 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Bisa02g1524 645 SUPERFAMILY ABC transporter transmembrane region 62 378 IPR036640 GO:0005524|GO:0016020
Bisa02g1524 645 Pfam ABC transporter transmembrane region 74 349 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa02g1524 Bisa-ChrBisa02 26402510 26411422 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa02g1524 135 645 Calmodulin-binding Proteins AT2G36910 36.520 2.22e-92 309