Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa02g1497 ATGGCGTCGGGAAAGCGATGCCACTACGAAATCCTTGGCCTCCAGCGAGACTGTACGCCCGACGAGATCCGAACGGCTTATCGGCGGCTTGCCCTTCAGCGCCACCCTGACAAGCTCGTCAAGTCCGGCTTATCTCAAGCCGAAGCCACGGCTCAATTCCAGGAGCTCCAACACGCCTACGAGGTCCTTTCCGACCCGAAAGAGCGAGCTTGGTACGATTCCCACCGCTCTCAGATTCTCTTTTCGGATCCCAACTCAGTCGGAAACTCGGTCCCTAACTCGTTCATCCCGAACCTGTTTTCCTTCTTCTCCAGCACCGTTTATTCTGGGTATTCTGACACGGGCAAGGGGTTCTATAAGGTCTATTCTGATGTTTTTGATAAAATTCATGCCAACGAAATTAACTTCGCGAAGAAATTAGGGTTAGGTATTGATGCGGTTCGACAAGCCCCTGTAATGGGTCATTTGGATAGCCCTTATGCCCAAGCGACGGCGTTTTACAATTATTGGTTGGGATTTTCTACGGTGATGGACTTTTGTTGGGTGGACGAGTACGATGTTATGGCTGGTCCTAACCGGAAGTCAAGGCGGCTTATGGAGGAAGAGAACAGTAAGATCAGAAAGAGGGCAAGGAAAGAATACAATGACACGGTGCGAAAGTTGGCGGATTTTGTCAAGAAGAGGGATAAAAGGGTGATTGATATGAAAGTGAAGAAAAATGTGGAGATGGAGAAGAAGAAAGAGGAGGAAAGGGAGAGGAAGAAGCAGCTAGAGAAGGAGAAAAAGGAGAGAGCGATGACATATGAAGAGCCTGAGTGGGCCAAAGTTGAGGAGGATGAAGATGAGGCAAACTGGTTTGAAGAGGTGGATGATGAGAGTAAAAAGAAGAATGCTGAAAATGAGTTTTATTGTGTATTGTGTGGGAAGAAGTTTAAAAGTGAGAAGCAATGGAAGAACCATGAACAATCAAAGAAGCATAAGGAGAAAGTTGCAGAATTTAAGGATTCACTTGATGATGAAGAGGAATTTAAGGAGGATGTGGAATTAGGGGTAGAAGAAGGAGTAGGGAAGGTGAGATTGGAGAGTGATGGAGATGATATTGTGGTGAATGATGATCAGTTAGGGAGCGCTGATATTGACGATTTAGAGGGGAGATTTAAAGATGGCCTCAATGTTACAGAGGAGAGGACTAGAAATGGGGCTGAGTTGAGTTATGAAGAAGACGAATTTCTTGATGCACAGCATCCAAAAGTGGAGGAGAAGGCTGGTGTCTCAGCAGGTTTTGATGAAGAAGAAGAAGATGATGATGAATTGGGAGTTCTTAAAGCAATGTTGGCTGGGCACAAGAACAGAAAAATTGGTGCTTCAAGGCCAGAGTCGAAGGCTTCAGCAATTACTTCTCAAGTTGAGAATGAGAATGATGAGGATGGCTTTATGGAATATGACAACCGAAAGAATTTAAGAAAGAAAAGTGGAGCGAAGAAAGAGAAGGATAGAAAAATTAGTGAAGAATCCAAAGTGACTACTATCAACAGTGATTTTCAGAATAAGAGCTATATTGACGTTGGTGCATCTCATAAAGAGGAGTCCTCTTCTCAATATAATGTGGAAAATGAGAGTAATGGTAAAGAGAATGAGCAGGTAGGTAAGAAGACTTCAAATCATCCTGTTGATAAAAAAGGAGCACCAAAGGATACGAAAACCAAAGCAAAAGTTTCATCCAAAGGAAGAAAAGCCAAGGCGACATTGAAGAATCTTGACAATATCTGTGAGGCCTGCGGGGAGGAGTTTGATTCAAGGAATAAATTACATAAGCATCTGGGTGATACTGGGCATGCGACAATAAAATATACTGGGAAGCATCGCTAG 1869 0.4393 MASGKRCHYEILGLQRDCTPDEIRTAYRRLALQRHPDKLVKSGLSQAEATAQFQELQHAYEVLSDPKERAWYDSHRSQILFSDPNSVGNSVPNSFIPNLFSFFSSTVYSGYSDTGKGFYKVYSDVFDKIHANEINFAKKLGLGIDAVRQAPVMGHLDSPYAQATAFYNYWLGFSTVMDFCWVDEYDVMAGPNRKSRRLMEEENSKIRKRARKEYNDTVRKLADFVKKRDKRVIDMKVKKNVEMEKKKEEERERKKQLEKEKKERAMTYEEPEWAKVEEDEDEANWFEEVDDESKKKNAENEFYCVLCGKKFKSEKQWKNHEQSKKHKEKVAEFKDSLDDEEEFKEDVELGVEEGVGKVRLESDGDDIVVNDDQLGSADIDDLEGRFKDGLNVTEERTRNGAELSYEEDEFLDAQHPKVEEKAGVSAGFDEEEEDDDELGVLKAMLAGHKNRKIGASRPESKASAITSQVENENDEDGFMEYDNRKNLRKKSGAKKEKDRKISEESKVTTINSDFQNKSYIDVGASHKEESSSQYNVENESNGKENEQVGKKTSNHPVDKKGAPKDTKTKAKVSSKGRKAKATLKNLDNICEACGEEFDSRNKLHKHLGDTGHATIKYTGKHR 622
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa02g1497 622 ProSiteProfiles Zinc finger C2H2 type domain profile. 588 617 IPR013087 -
Bisa02g1497 622 ProSitePatterns Nt-dnaJ domain signature. 53 72 IPR018253 -
Bisa02g1497 622 Gene3D Classic Zinc Finger 288 350 - -
Bisa02g1497 622 MobiDBLite consensus disorder prediction 449 579 - -
Bisa02g1497 622 PANTHER DNAJ PROTEIN JJJ1 HOMOLOG 2 617 IPR044648 -
Bisa02g1497 622 ProSitePatterns Zinc finger C2H2 type domain signature. 304 326 IPR013087 -
Bisa02g1497 622 SMART dnaj_3 6 68 IPR001623 -
Bisa02g1497 622 MobiDBLite consensus disorder prediction 318 337 - -
Bisa02g1497 622 MobiDBLite consensus disorder prediction 507 542 - -
Bisa02g1497 622 SMART c2h2final6 302 326 IPR013087 -
Bisa02g1497 622 SMART c2h2final6 588 612 IPR013087 -
Bisa02g1497 622 Pfam DnaJ domain 8 73 IPR001623 -
Bisa02g1497 622 SUPERFAMILY Chaperone J-domain 4 97 IPR036869 -
Bisa02g1497 622 Coils Coil 233 267 - -
Bisa02g1497 622 MobiDBLite consensus disorder prediction 318 348 - -
Bisa02g1497 622 PRINTS DnaJ domain signature 27 42 IPR001623 -
Bisa02g1497 622 PRINTS DnaJ domain signature 9 27 IPR001623 -
Bisa02g1497 622 PRINTS DnaJ domain signature 48 68 IPR001623 -
Bisa02g1497 622 MobiDBLite consensus disorder prediction 413 435 - -
Bisa02g1497 622 SUPERFAMILY beta-beta-alpha zinc fingers 296 343 IPR036236 -
Bisa02g1497 622 SMART ZnF_U1_5 299 333 IPR003604 GO:0003676|GO:0008270
Bisa02g1497 622 Pfam Zinc-finger double-stranded RNA-binding 302 327 IPR022755 -
Bisa02g1497 622 Gene3D DnaJ domain 1 87 IPR036869 -
Bisa02g1497 622 ProSiteProfiles dnaJ domain profile. 7 76 IPR001623 -
Bisa02g1497 622 MobiDBLite consensus disorder prediction 543 572 - -
Bisa02g1497 622 CDD DnaJ 7 65 IPR001623 -
Bisa02g1497 622 ProSitePatterns Zinc finger C2H2 type domain signature. 590 612 IPR013087 -
Bisa02g1497 622 MobiDBLite consensus disorder prediction 243 264 - -
Bisa02g1497 622 ProSiteProfiles Zinc finger C2H2 type domain profile. 302 331 IPR013087 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa02g1497 Bisa-ChrBisa02 25841347 25843738 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa02g1497 3 616 C2H2 Transcription Factor Family AT1G74250 51.306 0.0 535
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Bisa02g1497 DnaJ 7.8e-22 CL0392