Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa02g1460 ATGGGTTGCGTCTATACGAAGCAGACGGTGTCGGTGACGCCGGCGATCGACCACTCGGGTGTGTTTCGGGGCAATGACTGTGCGGGTCATTCGGGTCGGAGCTTGGGGGAGTTGGATAAGAGGATCAAGAAGAAGAAGAATAAAAGTGAGTCAGTGGTTGAGTCAGAAAGGGCGAGTTCGAACTGGGGCTGTGATGAGTCTTTGAGCTTCAGATTGGGGAATCTCCAGAAGTATGTGGAGGGAGAGCAAGTAGCCGCGGGATGGCCGGCGTGGCTTACTGCCGTCGCCGGCGAAGCCATTCAGGGTTGGGTTCCCCTCCGAGCCGATGCATTTGAGAAGCTCGAGAAGATTGGGCAGGGTACATACAGCAGTGTATTCCGAGCGAGGGAACTTGAGACAGGGAAGATAGTAGCGTTGAAGAAGGTGCGGTTTGACATTTTTGAGCCAGAAAGTGTGAGGTTTATGGCACGAGAAATAATGATTCTTAGAAGGCTTGATCATCCCAACATCATAAAATTGGAGGGCTTGATTACTTCCAAATTGTCATCCAGCATATACCTGGTTTTCGAGTATATGGAACATGACATTACAGGGCTCTTGTCTTGCACTGATATCAAATTTAGTGAATCACAGATTAAATGCTACATGAAACAGCTGTTATCTGGACTTGAGCATTGCCACTTACGGGGTGTAATGCATCGGGACATCAAAGGATCAAATCTTCTATTGAATAATGAAGGGATATTAAAGGTTGCCGATTTTGGATTGGCAAAATTCTCTGTTTCTGGGAACAAGCAGCCCCTCACCAGTCGTGTTGTCACCTTATGGTACCGTCCCCCTGAACTCTTGCTGGGTTCAACAGATTACGGTCCATCTGTGGATCTATGGAGTATTGGCTGTGTTTTTGCGGAGCTACTTGTTAGGAAGCCTATCCTTCAGGGGAGAACAGAGGTGGAACAATTGCATAAAATTTTCAAACTATGTGGATCCCCACCTGATGACTACTGGAAAAAGACCAAACTTCCTCACGCAACTCTGTTTAAGCCACAGCAGACATATAGTAGCTGCCTCCAAGAGACCTTCAAGGATTTGCCTGCGACCAGCGTGAATCTTCTACAAACTCTACTCTCCATTGAATCATACAAGCGTGGGACTGCCTCATCTGCTCTTTCATCGGAGTATTTCAAAACAAAGCCTTATGCATGCGACCCATCAAGCTTGCCGATATACCCACCTAGCAAGGAAATTGATGCAAAACACCGTGAGGAGTCAAGAAGAAAAAAGATTGGTGGAAGAGGTCGTGGACCTGAAACAAGAAAACCATCAAGAAAGCCACTAGGATTCAGCAAATTAGCCCCAGCAGAGGATTTGGCTAACCAAACTCAAAATTTCCAAAAGGTCAATTGTAGAACCACCCGCACTCTTAAAGAGGAGAGCACTGACACAGGTGAGGAGGTGCCGGCACCAAAGCCATCTACCGACAAAGCAGAAGATGCTTCCCATATAAAGAATGCATCGCATGGAGATATTCCCATATTGCAAGTTTCAACATCAAGTGGCTTTGCATGGGCAAAAAGGCGAAAAGATGATGCTTCAAGAAGATCCCATTGTCGATCTATTTCACGAGGACATGTTTTCAATCCATTAGAACTTTCTATGCTAAATTCAAGGCATAACTCTGACTCCAGAAACCCGGAAAATAAGGAGTTATGTGGGGGACGCTCCAACTCAAGGGGCGGTGACACGTGTGAAATCTCTAAGCTGGCAATGCTGAATCAATGGACCAAGTTTGATCGCCCAGACTCATTTGATGCTTCAGATGAATACCACTCACAAGAACTATCTATGGCCCTTTATCATAGAGAATATTCAGCATCCAAGAGAAGTAACCTGGATTCAGGAGAGAAGGTAGAATTTTCAGGACCTCTGTTATCTCAAATGCATACAGTCGATGAGCTCTTAGAAAGACATGAGCGTCATATCCGGTGCACAGTACGAAGATCTTGGTTTCAGAAAGGTATAACAGGGATTGAAAGAAGCAATTAG 2046 0.4575 MGCVYTKQTVSVTPAIDHSGVFRGNDCAGHSGRSLGELDKRIKKKKNKSESVVESERASSNWGCDESLSFRLGNLQKYVEGEQVAAGWPAWLTAVAGEAIQGWVPLRADAFEKLEKIGQGTYSSVFRARELETGKIVALKKVRFDIFEPESVRFMAREIMILRRLDHPNIIKLEGLITSKLSSSIYLVFEYMEHDITGLLSCTDIKFSESQIKCYMKQLLSGLEHCHLRGVMHRDIKGSNLLLNNEGILKVADFGLAKFSVSGNKQPLTSRVVTLWYRPPELLLGSTDYGPSVDLWSIGCVFAELLVRKPILQGRTEVEQLHKIFKLCGSPPDDYWKKTKLPHATLFKPQQTYSSCLQETFKDLPATSVNLLQTLLSIESYKRGTASSALSSEYFKTKPYACDPSSLPIYPPSKEIDAKHREESRRKKIGGRGRGPETRKPSRKPLGFSKLAPAEDLANQTQNFQKVNCRTTRTLKEESTDTGEEVPAPKPSTDKAEDASHIKNASHGDIPILQVSTSSGFAWAKRRKDDASRRSHCRSISRGHVFNPLELSMLNSRHNSDSRNPENKELCGGRSNSRGGDTCEISKLAMLNQWTKFDRPDSFDASDEYHSQELSMALYHREYSASKRSNLDSGEKVEFSGPLLSQMHTVDELLERHERHIRCTVRRSWFQKGITGIERSN 681
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa02g1460 681 MobiDBLite consensus disorder prediction 556 579 - -
Bisa02g1460 681 PANTHER CELL DIVISION PROTEIN KINASE 109 399 - -
Bisa02g1460 681 ProSiteProfiles Protein kinase domain profile. 111 395 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa02g1460 681 Pfam Protein kinase domain 111 395 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa02g1460 681 FunFam probable serine/threonine-protein kinase At1g54610 98 193 - -
Bisa02g1460 681 MobiDBLite consensus disorder prediction 414 444 - -
Bisa02g1460 681 MobiDBLite consensus disorder prediction 406 500 - -
Bisa02g1460 681 MobiDBLite consensus disorder prediction 455 470 - -
Bisa02g1460 681 Gene3D Transferase(Phosphotransferase) domain 1 194 432 - -
Bisa02g1460 681 ProSitePatterns Serine/Threonine protein kinases active-site signature. 231 243 IPR008271 GO:0004672|GO:0006468
Bisa02g1460 681 ProSitePatterns Protein kinases ATP-binding region signature. 117 140 IPR017441 GO:0005524
Bisa02g1460 681 Gene3D Phosphorylase Kinase; domain 1 98 193 - -
Bisa02g1460 681 FunFam probable serine/threonine-protein kinase At1g54610 194 434 - -
Bisa02g1460 681 SMART serkin_6 111 395 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa02g1460 681 CDD STKc_CDK9_like 111 395 - -
Bisa02g1460 681 SUPERFAMILY Protein kinase-like (PK-like) 105 402 IPR011009 -
Bisa02g1460 681 MobiDBLite consensus disorder prediction 471 500 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa02g1460 Bisa-ChrBisa02 25024102 25028613 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa02g1460 103 455 Core Cell Cycle Gene Families AT5G10270 47.425 2.24e-108 336
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CDK-CRK7-CDK9 Bisa02g1460 Pkinase 3.2e-67 CL0016