Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa02g1449 ATGGAGACTGAAGAACCCAATTTGAACAAAGAATCTGTTGTGGGTGCTGGAAATAATAGTAAGAGTGGGGAAGGGTTCATCGATAGAAGCAAAGTGAGGATTTTGTTGTGCGATAACGATGCTAAGAGTTCGGAAGAGGTGTTCACGCTTCTCTTGAAGTGCTCTTATCAGGTTACTTCAGTAAGGTCAGCAAGACAGGTAATTGATGCACTGAACGCAGAAGGGCCAGATATAGATATCATACTTGCTGAAGTTGACCTTCCTATGAAGAAGGGCTTGAAGATGTTGAAGTACATAGCTAGGGACAAAGAACTGCGCAGAATCCCTGTTATAATGATGTCGGCACAAGACGAGGTATCTATTGTTGTTAAGTGCTTGAGACTCGGAGCAGCAGACTATCTAGTAAAGCCTTTACGCACTAATGAACTATTAAATTTGTGGACGCACGTGTGGAGAAGGAGGCGCATGCTTGGACTTGTAGAGAAAAACATGTTGAATTATGACTTTGATCTGGTAGCATCGGATCCTAGTGATGCTAATACCAACAGTACCACCTTGTTCTCTGATGACACAGATGACAAGTCCAAGAGAAGCACTAATCCAGAGACAGGAATGCCTATCCAACAGGAGCATGAGTCTACTGTTGCTGTTGCCACTATAGTTGTTGAGGAGCCTCGAGATGCTCGTGCAGCAGAATATCGCCCTGATGTGCCTGGTATTAGTGATCGCCGAACAGCATTTTTTTCAATTGGTCCAAAGAAGAGTGAACTAAGGATTGGGGAATCATCGGCTTTCTTCACTTACGTTAAAGCAACCACAGTGAAGAGCAACTCCCAAGAAGTTATTCATGCCGACCCTAATGCTGTTACCCATTTGAGGATGGAAGACACTCATCAAGCCTGTACTCAACAGGGTGTTAATGATCTTCAAATACATGAAAATGGAGAGACATGTGAAAGCCATTCACAAGATGACTTACCCAGCTGTAATAGTATCCCTGATTCTTTCTCCATTGAAAGGTCTTCTACTCCACCTGCATCAATGGAAATTTCTCAGCAAAAACACTTTATGGAAGAACATTTATCTCAGGGCATAATCCATCCAATAAACGGAACTCATAATTCAGAGCTTGAAGCATCTGGCATGCCCGCTCAACATCATTATCCATATTATATTTCAGGAGTTGTTAATCCTTTAATGACGCCATCATCAGCACAACTGTATCAAAAGAATTTCCAGGACATGCAGACTCATGCTAGTACTGCTATGATTGCACAGTACAATCATCTTTCCCAATGCCCTCCTCATGCAACTGGGATGTCATCCTTCCCATATTACCCAATGAGTATATGCTTACAACCTGGACAGATGTCAACAGTTCAGTCATGGCCATCATTTGGAAGAGCAGGCTCATCTGAAGCAAAATTAAGTAAAGTTGACAGGAGAGAAGCAGCATTAATGAAGTTTAGACAGAAAAGGAAAGAGCGCTGCTTTGATAAGAAAATTAGGTATGTCAATAGGAAACGACTTGCTGAAAGGCGGCCTCGTGTGAGGGGACAGTTTGTCAGGAAGTTGAATGGTGTAAATGTAGATCTTAATGGACAACCCACTTTCACTGACTACGAGGATGATGATGAGGATGAGGAGGATCATGCAGCAAGAGATTCCTCTCCCGAGGATGCCTGA 1686 0.4282 METEEPNLNKESVVGAGNNSKSGEGFIDRSKVRILLCDNDAKSSEEVFTLLLKCSYQVTSVRSARQVIDALNAEGPDIDIILAEVDLPMKKGLKMLKYIARDKELRRIPVIMMSAQDEVSIVVKCLRLGAADYLVKPLRTNELLNLWTHVWRRRRMLGLVEKNMLNYDFDLVASDPSDANTNSTTLFSDDTDDKSKRSTNPETGMPIQQEHESTVAVATIVVEEPRDARAAEYRPDVPGISDRRTAFFSIGPKKSELRIGESSAFFTYVKATTVKSNSQEVIHADPNAVTHLRMEDTHQACTQQGVNDLQIHENGETCESHSQDDLPSCNSIPDSFSIERSSTPPASMEISQQKHFMEEHLSQGIIHPINGTHNSELEASGMPAQHHYPYYISGVVNPLMTPSSAQLYQKNFQDMQTHASTAMIAQYNHLSQCPPHATGMSSFPYYPMSICLQPGQMSTVQSWPSFGRAGSSEAKLSKVDRREAALMKFRQKRKERCFDKKIRYVNRKRLAERRPRVRGQFVRKLNGVNVDLNGQPTFTDYEDDDEDEEDHAARDSSPEDA 561
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa02g1449 561 Gene3D - 32 234 - -
Bisa02g1449 561 ProSiteProfiles Response regulatory domain profile. 33 151 IPR001789 GO:0000160
Bisa02g1449 561 SMART REC_2 32 147 IPR001789 GO:0000160
Bisa02g1449 561 MobiDBLite consensus disorder prediction 180 212 - -
Bisa02g1449 561 MobiDBLite consensus disorder prediction 538 553 - -
Bisa02g1449 561 Pfam Response regulator receiver domain 34 145 IPR001789 GO:0000160
Bisa02g1449 561 PANTHER TWO-COMPONENT RESPONSE REGULATOR 32 240 IPR045279 GO:0009736
Bisa02g1449 561 Pfam CCT motif 482 524 IPR010402 GO:0005515
Bisa02g1449 561 SUPERFAMILY CheY-like 28 157 IPR011006 -
Bisa02g1449 561 ProSiteProfiles CCT domain profile. 482 524 IPR010402 GO:0005515
Bisa02g1449 561 FunFam Two-component response regulator-like APRR1 32 278 - -
Bisa02g1449 561 MobiDBLite consensus disorder prediction 531 561 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa02g1449 Bisa-ChrBisa02 24926640 24932591 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa02g1449 21 560 Response Regulator Gene Family AT5G61380 50.637 0.0 547
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Pseudo ARR-B Bisa02g1449 Response_reg 1.9e-17 CL0304
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bisa02g1449 02 24926640 24932591 Bisa02g1449 02 24926640 24932591 ECH