Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa02g1442 ATGGAGAACCTTGATAAGATGGATTTGCCTCCTGGGTTTCGGTTCCACCCCACTGACGAAGAGCTTATAAGTCATTACTTGTACAAGAAGGTCATGGACACCAGTTTCTCTGCTAGGGCCATTGGAGAGGTGGACTTGAACAAGTCTGAGCCTTGGGATTTGCCGTGGAAAGCGAAAATGGGAGAGAAAGAGTGGTACTTCTTCTGTGTGAGAGACAGAAAGTACCCAACTGGTTTGAGGACCAACAGAGCCACTGAAACTGGGTACTGGAAAGCCACAGGGAAAGATAAGGAGATTTACAGAGGAAAATCGCTGGTGGGGATGAAGAAAACTCTGGTTTTCTACAGAGGAAGAGCACCCAAAGGAGAGAAAACCGATTGGGTCATGCATGAGTACAGATTAGAGGGTAAATTCTCCATCCACAACCTCCCTAAATCTGCAAAGAATGAATGGGTGATTTGCAGGGTTTTTAAGAAGGGATCAAGTGGTAAGAAAACCCATATTTCCGGGATGATGAGGCTGGATTCTTTGGGAAATGAAATGGGTTCTTCTGGTTTACCACCATTGACGGATTCTTCACCTTACACTGGCAGTAAGAACAAACCGTCCACAGAATCGGCCTACGTGCCCTGCTTCTCCAAGCCAATCGATGCTCAAAGAAACCAAGGAGCCGTCTTTGATTCCTTCAGCAATAATTCCCTCTCTGGGGTTCCCTCAAATCCTTCAGATACCCTCCCCAGAATCCCACTTTCTGGTTCGTTATATTCCACACAAGGACAAGGCCTTCAATCTCCTGCAAATTTAGCCTTACCCGGTTCCGTTTACAACCTGCAAGACCAGAGTATCCTCAGAGCCTTGCTTGAAAACCATGGTTCAAACAGGACCAGCTTCAAAACAGAGAGGGAAATGGTCACTGTCTCGCAAGAAACTGGTCTCTCTACTGACATGAACCCTGAAATCTCTTCGGTCGTTTCAAGTTTTGATATGGGTCGAAGGCCCTTCGACAATCAGCACCCACCTTCTCCTTCTGCTGCACCTGTGGACTTTGAAACCTGGTGGAATTACTAA 1068 0.4663 MENLDKMDLPPGFRFHPTDEELISHYLYKKVMDTSFSARAIGEVDLNKSEPWDLPWKAKMGEKEWYFFCVRDRKYPTGLRTNRATETGYWKATGKDKEIYRGKSLVGMKKTLVFYRGRAPKGEKTDWVMHEYRLEGKFSIHNLPKSAKNEWVICRVFKKGSSGKKTHISGMMRLDSLGNEMGSSGLPPLTDSSPYTGSKNKPSTESAYVPCFSKPIDAQRNQGAVFDSFSNNSLSGVPSNPSDTLPRIPLSGSLYSTQGQGLQSPANLALPGSVYNLQDQSILRALLENHGSNRTSFKTEREMVTVSQETGLSTDMNPEISSVVSSFDMGRRPFDNQHPPSPSAAPVDFETWWNY 355
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa02g1442 355 ProSiteProfiles NAC domain profile. 9 159 IPR003441 GO:0003677|GO:0006355
Bisa02g1442 355 MobiDBLite consensus disorder prediction 179 206 - -
Bisa02g1442 355 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 8 239 - -
Bisa02g1442 355 Gene3D NAC domain 18 163 IPR036093 GO:0003677|GO:0006355
Bisa02g1442 355 MobiDBLite consensus disorder prediction 183 206 - -
Bisa02g1442 355 Pfam No apical meristem (NAM) protein 10 134 IPR003441 GO:0003677|GO:0006355
Bisa02g1442 355 SUPERFAMILY NAC domain 4 159 IPR036093 GO:0003677|GO:0006355
Bisa02g1442 355 FunFam NAC domain-containing protein 100-like 18 163 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa02g1442 Bisa-ChrBisa02 24814666 24815947 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa02g1442 7 355 NAC Transcription Factor Family AT5G07680 61.605 3.62e-145 411
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Bisa02g1442 NAM 1.1e-39 No_clan