Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa02g1421 ATGATGGGGAGGCCACCTTGCTGTGACAAAATTGGGATCAAGAAAGGCCCTTGGACTCCCGAAGAAGACATCACTTTGGTCTCTTACATTCAGCAACACGGCCCAGGAAACTGGAGATCTGTTCCCACCAATACAGGTTTGACGAGATGCAGTAAAAGCTGCAGGCTCAGATGGACCAACTACCTTCGACCTGGTATCAAAAGAGGCAATTTCACTGACCATGAGGAGAACATGATCGTCCACCTCCAAGCCCTTCTCGGCAACAGATGGGCTGCTATAGCTTCGTATCTTCCGCAGAGGACAGACAACGACATTAAGAACTACTGGAACACCCATTTGAAGAAGAAGCTGAAGAAGCTGAGGTCTGGGATGGAGGTTGAGGATGACCAACAAGGACAGTCATGTTCGCAGAGAAGCAAGGGACAGTGGGAGAGAAGGCTTCAAACAGATATCCACATGGCCAAGCAGGCCCTGCGCAAGGCTCTGTCTTTCCACACCACAGCAACTTCAACCCCTTCCAATTCCCCACTCCAAACCAACACTAAGCCCTCCATTTCCGATTCAAATTGTTCCACTTCATCATTATACGCCTCAAGCACCGAAAACATAGCCCGATTGCTGCAAAACTGGAACAAGAAAACCCCACTAAACTCGGCCACTTATTCACAAGATAGCAGTGCTCTCGATTATTCCCTCTGCACCTTCTACTCCTCCAGTAATAACTCTGATGCATCTCAATCCGCAGACACACCCAGTGGCTTGTTCCAACAACAAAGCAAACCCACCATGGAGTCCCAAGTGCCTCTGACCTTGCTGGAGAAGTGGCTCTTCGATGATGGGGTGCCTCTGAGCCCCAAGGACCCAATTGACATCACAGCGCTGCAAGACACTATACCACCCTTGTTTTAG 909 0.4961 MMGRPPCCDKIGIKKGPWTPEEDITLVSYIQQHGPGNWRSVPTNTGLTRCSKSCRLRWTNYLRPGIKRGNFTDHEENMIVHLQALLGNRWAAIASYLPQRTDNDIKNYWNTHLKKKLKKLRSGMEVEDDQQGQSCSQRSKGQWERRLQTDIHMAKQALRKALSFHTTATSTPSNSPLQTNTKPSISDSNCSTSSLYASSTENIARLLQNWNKKTPLNSATYSQDSSALDYSLCTFYSSSNNSDASQSADTPSGLFQQQSKPTMESQVPLTLLEKWLFDDGVPLSPKDPIDITALQDTIPPLF 302
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa02g1421 302 MobiDBLite consensus disorder prediction 242 261 - -
Bisa02g1421 302 FunFam MYB-related transcription factor 14 67 - -
Bisa02g1421 302 FunFam Transcription factor MYB30 69 127 - -
Bisa02g1421 302 ProSiteProfiles Myb-like domain profile. 63 113 IPR001005 -
Bisa02g1421 302 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 10 66 IPR017930 -
Bisa02g1421 302 PANTHER MYB FAMILY TRANSCRIPTION FACTOR 2 242 - -
Bisa02g1421 302 SMART sant 14 64 IPR001005 -
Bisa02g1421 302 SMART sant 67 115 IPR001005 -
Bisa02g1421 302 Gene3D - 70 146 - -
Bisa02g1421 302 MobiDBLite consensus disorder prediction 127 142 - -
Bisa02g1421 302 CDD SANT 70 112 IPR001005 -
Bisa02g1421 302 Pfam Myb-like DNA-binding domain 15 62 IPR001005 -
Bisa02g1421 302 Pfam Myb-like DNA-binding domain 68 113 IPR001005 -
Bisa02g1421 302 MobiDBLite consensus disorder prediction 165 191 - -
Bisa02g1421 302 SUPERFAMILY Homeodomain-like 12 109 IPR009057 -
Bisa02g1421 302 Gene3D - 14 67 - -
Bisa02g1421 302 ProSiteProfiles Myb-like domain profile. 10 62 IPR001005 -
Bisa02g1421 302 MobiDBLite consensus disorder prediction 123 142 - -
Bisa02g1421 302 CDD SANT 17 62 IPR001005 -
Bisa02g1421 302 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 67 117 IPR017930 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa02g1421 Bisa-ChrBisa02 24521708 24522786 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa02g1421 2 279 MYB Transcription Factor Family AT5G62470 53.216 1.56e-105 310
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Bisa02g1421 Myb_DNA-binding 1.5e-15 CL0123