Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa02g1407 ATGTCTGTACACTTGCCACTCGTTTGTCGCTTACGAGACAATCGAAGCTTGTCTCTCTGCGATTTCGCGTCTCTATCTGAAATTTCAAATGTCTCTTTCAATAAAACACTATCCGTAGAAGCTGGATTGACTTTTTCTTGTGGGATTTCAAGTGGGTACGTTCCTCTAATGGGAAATTGCTTCCGTTCTCGTTCCAAGGTTGATGACACTCTCACCTCTCAACAACCTTTTGATGCATCAAAAGTTCCTGGTAGAGGCACCCATTCCTATTCAAGCCAATTAGTGCAAAATTACAATAACAAAGGTAAATCTGAGACTCTCCCTGCTCCAAGATCTGAAGGTGACATACTTTCCTCACCAAATTTGAAGGCCTTCACGTTCAATGAGCTTAAGAGTGCTACTAGAAACTTTCGTTTGGAAGGTCTGATCGGAGAAGGGGGCTTTGGTTTTGTCCACAAGGGGTGGATTGATGACCAATCCCTCAGTGCTACAAAGCCTGGATCTGGAATGGTTGTGGCTGTAAAGAAGCTAAAACCTGAAGGTTTTCAAGGACATAAGGAGTGGCTGTCTGAAGTCAATCATCTTGGCCAACTTCATCATCCAAATCTTGTCAAACTTATTGGATACTGCCTCGATGGGGACAACCGGCTTCTAGTATATGAGCACATGCCCAAAGGCAGCTTGGAGAATCATCTATTTCGCAGGGGCTCACAGCCACTTTCATGGGAAACAAGGATCAAAGTTGCCACTGGTGCTGCTCGAGGTCTCACCTTTCTACATGACTGCAATCCACAAGTTATCTACCGTGATTTTAAGGCGTCAAATATATTATTAGATTCGGAATTTAATGCAAAACTCTCGGACTTTGGGTTGGCCAAAGCTGGGCCCACAGGTGATCGTTCTCATGTTTCAACCCAAGTTTTGGGTACTCAAGGCTACGCTGCACCTGAATATATAGCTACAGGTTGGCTGACTTCAAGGTGTGATGTCTATAGCTTCGGGGTTGTGCTATTGGAACTACTGTCAGGTCGGCGAGCTGTTGATAAAACAAAAACGGGAGCGGAACAGTATCTGGTAGATTGGGCAAAACCCTACTTGGGTGATAGGAGGAGGCTATTCAGGATTATGGACACCAAGTTAGAAGGGCAGTATCCACAGAAGGCAGCTTATACAGTTGCAATCCTTGCATTACAGTGCATCAGTGATGCCAAAATCAGACCACAGATGTCTGAGGTTTTGGCTACTTTGGAACAGTTACCTTCCTCCAGATCGGCCCCTCCCAAACAGAGCTCCATCCCTTCTTCCACGAGAAATTGGCCTTTGGGACATACTAGTCAACCAAATAACAGCACTATGAGGTCTCCATTGCCATCCATAAAATCCCCAGGGGAAGGATAA 1398 0.4514 MSVHLPLVCRLRDNRSLSLCDFASLSEISNVSFNKTLSVEAGLTFSCGISSGYVPLMGNCFRSRSKVDDTLTSQQPFDASKVPGRGTHSYSSQLVQNYNNKGKSETLPAPRSEGDILSSPNLKAFTFNELKSATRNFRLEGLIGEGGFGFVHKGWIDDQSLSATKPGSGMVVAVKKLKPEGFQGHKEWLSEVNHLGQLHHPNLVKLIGYCLDGDNRLLVYEHMPKGSLENHLFRRGSQPLSWETRIKVATGAARGLTFLHDCNPQVIYRDFKASNILLDSEFNAKLSDFGLAKAGPTGDRSHVSTQVLGTQGYAAPEYIATGWLTSRCDVYSFGVVLLELLSGRRAVDKTKTGAEQYLVDWAKPYLGDRRRLFRIMDTKLEGQYPQKAAYTVAILALQCISDAKIRPQMSEVLATLEQLPSSRSAPPKQSSIPSSTRNWPLGHTSQPNNSTMRSPLPSIKSPGEG 465
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa02g1407 465 Gene3D Phosphorylase Kinase; domain 1 113 222 - -
Bisa02g1407 465 SUPERFAMILY Protein kinase-like (PK-like) 121 446 IPR011009 -
Bisa02g1407 465 CDD STKc_IRAK 143 419 - -
Bisa02g1407 465 ProSitePatterns Serine/Threonine protein kinases active-site signature. 266 278 IPR008271 GO:0004672|GO:0006468
Bisa02g1407 465 Gene3D Transferase(Phosphotransferase) domain 1 223 433 - -
Bisa02g1407 465 MobiDBLite consensus disorder prediction 417 457 - -
Bisa02g1407 465 ProSiteProfiles Protein kinase domain profile. 137 419 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa02g1407 465 FunFam Serine/threonine-protein kinase PBS1 223 434 - -
Bisa02g1407 465 Pfam Protein tyrosine and serine/threonine kinase 140 415 IPR001245 GO:0004672|GO:0006468
Bisa02g1407 465 MobiDBLite consensus disorder prediction 417 465 - -
Bisa02g1407 465 FunFam Serine/threonine-protein kinase BIK1 104 222 - -
Bisa02g1407 465 ProSitePatterns Protein kinases ATP-binding region signature. 143 176 IPR017441 GO:0005524
Bisa02g1407 465 PANTHER OS01G0588500 PROTEIN-RELATED 97 419 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa02g1407 Bisa-ChrBisa02 24154543 24160882 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa02g1407 81 433 Glycoside Hydrolase AT3G07070 50.000 2.73e-109 328
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Bisa02g1407 PK_Tyr_Ser-Thr 8.9e-44 CL0016