Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa02g1406 ATGAGCGGGAAAACGAGGACCAACCTTCTCTCTCAAGTACTCGCTTTACAGTGCTGGCAAATTTCACAGCACGAGACTTTTCCCAGACAGTCCGTTTCACATGAGCTGAACGAGGAGTTTAGCGTGTTATTCAGTGAGGTTAACTACACGCAAGTCCATTTCCCACAAATTGTCCAAGCTTTTTCAGTTTCAGGCACTGGACGTAGTTCACAGAAGAGCAACATACCAAGCAAGCACAAAATTGATGCAGCTTTAGATCGCTTTCTTCTTTTTTCAGTTTTTTTCTTGCCGTCTTGGTTTTCAAGCTCTCCCTCTTCCATGGAGGTTCCACATTTGCCAGGTCCTGATCTCACAATGGGCAAGTCACCTGGAAAATGGATCAAAACTGTACTATTTGGGAAAAAGTCATCCAAATCAAATATTTTCAAAGGAAGAGAGAAACTTGTTAATCAAAAGGAATCATTGGTTGCTTCCAAGGCATCAGAAACTGCTTTGGCTTTAGATCCAACCCCTGATCTGATTGCCAGAAATGAGGAAGACTTAGAACTGGAGGATAAAGAAGCAGAAAATCCTTTGCCAGTGAATCAAGAAACAGATCTTGTGGGACATGTTCATCAAAATGCACCACCTGATCCAGAGAAAATCAGGCAGGATGAAGCTGCAACAAAGGCACAGGCTGCTTTTAGAGGTTATTTGGCTCGCAGGGCATTTAAGGCCCTAAAAGGTATAATAAGATTGCAAGCACTTATTCGTGGGCACTTAGTTCGAAGACAAGCTGTTGCTACATTATGCTGTATGTATGGGATTGTCAAAGTACAAGCAGTCATTCGTGGAGCAAGAGTTAGACAGTCTGATGTTGGTTATGAAATCCATGAGAAGGTCACTATTTTGAAGCTTCAGGATGGAAAGCTCGCTAATCCAGTGGATGTATCAACAAAATATGCAAAGCTGTCAACAAGTACTTTCACCCGAAAGCTGCTTGCTTCGTCTACTACTATAATGGCCCTGCACCTCCAATATGTTCCTGGTGACCCAAATTCAGTCTTAAGTTGGCTGGAGCGCTGGTCAGCATCCCACTTTTGGATACCAGTTCCCCAACCCAAGAAAATTCCAGAACCTAAATCTCAGAAAAAGCAGGGAGAAGTTCAAATGAGCAAGTCAAGACGTACCAACCGGAAGCTTCCAGCTGCAAATTCTGACTTGGTCCCAGTACAAGCAAATCCTGAATTTGAGAAACCAAAACGAAACCTGAGGAAAATAGCAAATCAACCTACAGATCCAGTGCAAGAAAATCCACAAAGTGAGCTTGAAAAGGTTAAGCGTAGCTTGAGAAAGGTTCATAACCCTGTTGTCGAGAATGCTGTTCAGCCAGAAGTGGAATATGAGGCTCCAAAGCAGCATTTGGAAAAGGCAACAATTACCTCAGGTACCTCAGGTCGTTGTGTTTCAGAGCAAGCAGTTACTAATTCTAGAGCTGATGACAGCCATGCACCACCTGTGTCCGTGTTTCCAAAGGCACCTGAGAAGATCAACAAAGAAGCAGTATTGACCATACCCGTGTCTATGCCTGACGTAGAAATTACTCCTAGACCTTCAGTAAGCAAAGAGGTGTCTGAAATGCCAAGCAGTTATCAAGTGACAGTGGATTCAAAGCCCTCCGCTGAGAATACAAGTAAAGATAAAAACAATTCTGGTGACGAAGCTATAAATGAGCCAACAGATCTACCAGATAGTGGTTGTAAAGATGAAAACTCTCCCCTAACAAATGGAAATTTGAATCATAGGGAAGATCCAACAAGCATTGAAAACCAGAAACTCTCACGCAGAGCCTCAGGTCAGGGGAAGCAGGAACGTCTGGATAATGGTTTACAGAATAGTCCAACATTACCAAGCTATATGGCAGCAACTGAATCAGCCAAGGCAAAGTTGAGGGCACAAGGGTCCCCAAGGTTTGGACAAGAAGGAGGAGAGAGAAATAACTCTGCCCGGCGTCATTCTTTGCCGTCTTCAACTAACAGCAAAATTAGTTCTCATTCACCAAGGACACACAGACCAGTTCAAACAGGTGGTAAAGGAGGGCACAGGGGTGATAAAACTGTCTCTAGAGATGGGAATGGAAAGATAATTCAAGCAGAGTGGAGGAGGTAA 2148 0.4358 MSGKTRTNLLSQVLALQCWQISQHETFPRQSVSHELNEEFSVLFSEVNYTQVHFPQIVQAFSVSGTGRSSQKSNIPSKHKIDAALDRFLLFSVFFLPSWFSSSPSSMEVPHLPGPDLTMGKSPGKWIKTVLFGKKSSKSNIFKGREKLVNQKESLVASKASETALALDPTPDLIARNEEDLELEDKEAENPLPVNQETDLVGHVHQNAPPDPEKIRQDEAATKAQAAFRGYLARRAFKALKGIIRLQALIRGHLVRRQAVATLCCMYGIVKVQAVIRGARVRQSDVGYEIHEKVTILKLQDGKLANPVDVSTKYAKLSTSTFTRKLLASSTTIMALHLQYVPGDPNSVLSWLERWSASHFWIPVPQPKKIPEPKSQKKQGEVQMSKSRRTNRKLPAANSDLVPVQANPEFEKPKRNLRKIANQPTDPVQENPQSELEKVKRSLRKVHNPVVENAVQPEVEYEAPKQHLEKATITSGTSGRCVSEQAVTNSRADDSHAPPVSVFPKAPEKINKEAVLTIPVSMPDVEITPRPSVSKEVSEMPSSYQVTVDSKPSAENTSKDKNNSGDEAINEPTDLPDSGCKDENSPLTNGNLNHREDPTSIENQKLSRRASGQGKQERLDNGLQNSPTLPSYMAATESAKAKLRAQGSPRFGQEGGERNNSARRHSLPSSTNSKISSHSPRTHRPVQTGGKGGHRGDKTVSRDGNGKIIQAEWRR 715
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa02g1406 715 MobiDBLite consensus disorder prediction 582 597 - -
Bisa02g1406 715 MobiDBLite consensus disorder prediction 695 715 - -
Bisa02g1406 715 MobiDBLite consensus disorder prediction 366 416 - -
Bisa02g1406 715 MobiDBLite consensus disorder prediction 535 553 - -
Bisa02g1406 715 PANTHER IQ-DOMAIN 5-RELATED 119 673 - -
Bisa02g1406 715 ProSiteProfiles IQ motif profile. 241 263 IPR000048 GO:0005515
Bisa02g1406 715 MobiDBLite consensus disorder prediction 525 715 - -
Bisa02g1406 715 ProSiteProfiles IQ motif profile. 217 245 IPR000048 GO:0005515
Bisa02g1406 715 MobiDBLite consensus disorder prediction 486 505 - -
Bisa02g1406 715 SMART iq_5 216 238 IPR000048 GO:0005515
Bisa02g1406 715 SMART iq_5 239 260 IPR000048 GO:0005515
Bisa02g1406 715 Pfam IQ calmodulin-binding motif 241 258 IPR000048 GO:0005515
Bisa02g1406 715 Pfam IQ calmodulin-binding motif 219 238 IPR000048 GO:0005515
Bisa02g1406 715 MobiDBLite consensus disorder prediction 371 388 - -
Bisa02g1406 715 MobiDBLite consensus disorder prediction 617 633 - -
Bisa02g1406 715 Gene3D - 215 265 - -
Bisa02g1406 715 Pfam Protein of unknown function (DUF4005) 617 694 IPR025064 -
Bisa02g1406 715 MobiDBLite consensus disorder prediction 662 684 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa02g1406 Bisa-ChrBisa02 24134147 24140445 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa02g1406 119 715 IQD Protein Family AT1G74690 42.926 8.36e-124 379
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bisa08g1865 08 44808492 44816409 Bisa02g1406 02 24134147 24140445 ECH
Bisa02g1406 02 24134147 24140445 Bisa02g1406 02 24134147 24140445 ECH