Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa02g1379 ATGAGTTCTAATCACACTCCTCATAGCGCGACAAAGATCGAACTGCCTCCCCAATCTGAGCATTCGGCTTACTCCACAATCAAGCTTGAATGTGAACGAGCCCTCACTGCGCTCAGGCGTGGTAACCACACCAAGGCACTGAGGCTTATGAAGGAGTCTTGCTCCAGACACGAGAACTCGGCTTACTTGGCTTTAATTCACCGAGTTCAGGGTACCGTGTGTGTCAAAGTGGCATCTATTATTGATGACCCAAGTGCGAAGCAAAGGCATTTGAAGAATGCAATTGAGTCGGCACGAAAAGCAGTTGAGCTGTCACCCAGTTCTATTGAGTTCGCACATTTTTGTGCAAATTTGTTGTATGAGGCAGCAAATGATGCCAATGAGTACGAGCAGGTGGTGAAGGAGTGTGACAGGGCGCTCTCAATTGAAAATCCAATTGATCCTGCGAAAGAGAGCTTGCAGGATGAGAGCCAGCAGAAAATATCAACTGCAGATGCCCGAATAGCACATGTGCAGAATGAGTTGCGGCAGCTAATTCAGAAGTCAAACATAGCTTCCTTATCGACATGGATGAAAAATCTGGGTAATGGTGAGGAGAAATTCCGATTGATTCCAATAAGGAGGGCTACAGAGGACCCAATGGAGGTGAGGTTGGTTCAAACTAGAAGGCCAAATGAAATCAAGAAGGTGACCAAGACACCTGAAGAGAGAAGAAAAGAAATTGAAGTTCGGGTGGCTGCTGCAAGGCTATTGCAGCAAAAGTCAGAGGCAACCCCATCCCAGAATGAAGGAGAAAGGGATGACACAACATTGGACTCATCTTTGGGATCTGGGCAGAGGATAAATGAGAGGCGCAAGTATGGGCATGTGCGAAAACCCGGCACTACATCTGAAAGGAGAGACTTGGTACATTCCTATTGGAATTCAATGAATATTGATTTGAAGAAGGAGTTGCTTAGGATTAGAGTATGTGATCTGAAATCCCACTTTGGGTCTTCAAAGGATACTGTGCCAAATGATATATTAGCAGAAGCTTTGTCCTATGCTGAGGTCAATAAAACTTGGAAATTCTGGCATTGCTGCCGCTGTAACGAAAAATTTTCATATTCAGAATCTCATGTGCAGCATGTTGTGCAGGAACACATGGGAAATCTTTTACCTAAAATGCAGAGACTTTTGCCTCAAAATGTTGATAATGAATGGATTGAGATGATTCGTAACTGTTCTTGGAAGCCTCTGGATGCCTCTGCCGCTGTTAAAATGCTTGAAAATCAAGCAAAATGTAGAGATTTTTCATTTGCTGAGGATACTTGTGTAGATCATCATATTGAGGAGAACCATGATTGTTTTAAAGATGCCTCTAATTCTTACCTTGGGAAGGGACACGACTTCCATAATTGTACAGCATATAGAAGTAATTATTGTAAGTCTGCAGAGACTTATACCAAAGAAGGTGATGAGTTCCAAGGGTCTGTAGCATATTCCCTTGCTGATGGTTGGCCATTATCTGAGGACCCTGAGCGTGCAAAACTTCTTGAGAAAATTCATGCAGTGTTAAATTTGCTTATTAGACACAAATATCTTGCTGCTGGTCATCTTAACAAGGTCATGCAATTTACTATGGATGAGATACAGGGTCTTGCTGCTGGATCTCAGCTTCTAAACCATGGTTTAGATCAAACACCAATATGCATATGCTTTTTAGGAGCTTCCCAGCTTAAGAAAATTCTCAAATTTTTGCAGGACATATCTCAAGCTTGTGGTTTGGGTAGATATGCCGAAAAAACCAGTACTCCCGCAGATGATCTACACAATGCCAATCAAGTTGCTGAGATTAAAGAGAAGATTGTTCTCAATGGAGATGCATCATGTCTCCTACTGGATGAGTGTTTATTGCCAGCACAAATCTCTTCTGCTGCAGCTCAGGGTGCTGTCTTGGATGATGTGATTGCCCCAACTTCTAATGATGTTTTACACAGTACCGATCCTTTCTTATCTTGGATATTTTCAGGTTCATCTAGTGGGGATCAATTGACCTCATGGATGAGAAAAAGAGAGGACAAAAGACATCAAGGAATGGAAATTGTCCAGACACTTGAGAAAGAGTTTTATCACCTACAGAGCCTTTCTGAGAAGAAGTGTGAGCGTATGAGTTATGAGGAAGCACTGCAGGCAGTAGAGGATCTTTGTCTAGAAGAAGGTAAGAAGAGGGAAAATTTCACTGAATTTGTTCAGCGAAGCTACGAATCTGTTCTAAGAAAGCGGAGGGAAGAGCTCATTGAGAATGAGAATGATGTAATGTATGTTAGCAATAGGTTTGAGTTGGATGCCATAACAAATGTTCTGCAAGAAGCAGAGACAATGAATGTCAATCAATTTGGCTATGAGGAAACTTATGCGGGTGTATGTGACTTGGAATCTGGTGAAGATGATGAATGGAGAATGAAGGACTATTTGCATCAAATGGATAGTTACATTGAAATTGCTATTCAGAAACTGAAAGAACACCTATCTGTGGAGCTGAGCAAAATTGATGCACGAATCATGAGAAATGTTGCAGAGGTGCAGCAGTTGGAACTCAAGCTTGAGCCTGTTTCTGCTCATGATTATCGAGCAATATTGCTGCCCCTAGTGAAGTCGTACCTAAGGGCACGTTTGGAAGATTTGGCTGAGAAAGATGCAAGGGAGAAGTCTGATGCTGCAAGAGAAGCATTTTTGGCTGAGCTTGCTCTTGATTCAAAGAAGGTTGTTAAAGGGGGAAGTGATAGCTCCAGACATATGGAGAAGACAAAAGATAAGAAAAAGAATAAAGACAACAGAAAAACAAGGGATTTGAAGGCTTCAAGTGGTCATGAGCGGCTCATTCTTGACACCATACCTGAACCTGATTCCTATTCAGTTGCTCCTGATAATGACCATCCAGATTCTGAGGTTCTTGTTTCTACGAATGGTGACTACTTGGAACAACAGGAAGAGGAATTTAGACGTAAAATTGAGCTAGAAGAGGAGGAAAAAAAGCTTGAAGAAACTTTGGAGCTTCAACGACGGATAGAAAATGAGGCTAAACAGAAGCACCTTGCTGAGCAACAAAAGAAATCCTCTGAGACATTAGAGAAGTCGCCTGATAAAGTTCTGGATGTGCAAGTAAAGGCTGTTGCTGAGAGTCCAGATGTACATGAACATGTGAGACCACATAAGAGGGAGCAGTTAGCAAATGAGAATGGGTACCCTAGCAATCTAGATGGTGTGCTTATTGCCACAGCAAATGGTTCTGCAGTACTAAATAAATCTTCAGCCAATTCTGCCAATCAAAAGATTCATCGTTTGCATCAATCAAATGTTAAACAAGATCTCCCTAACAGAGGAGTTTCTGAGAACAGTTTTCAGCTGCCTCAACAGCGTACGGGAAAAAAGGGTAAACGGCACAAAAATGCATCCAGGTTGGTAGAGGGGAAGTTTGATTTTGCCTCATCGGAAAAGGAGAACTATGAGGGTACAATTACTGATAATAACTTGAGAGAGAGGGTTAAATTCCACAATAATCAAGATGCAAAAAATGCGAGAGGAGACAATGGATTAAAGACTCTGAAAGAGTTGCAAGTGGAACATGATGAGGAGGAAAGATTCCAAGCTGATCTTAAAAAGGCTGTACGCCAAAGTCTTGACACATATCAAGCACTTCAAAAATTGCCTCCAGTTTCAAGATTGAGAATGCCAGAGAACGCTTCTTCACAGGTAGATAATTTTGGTGTTCTGCTGGAGGAAAACACTACTGAGAATGTAAATGGAGGTACTTTGCTTGGTACTGGGCTGAAGAATGAAGTGGGTGAATATAATTGCTTTCTCAATGTTATTATACAATCTTTGTGGCATTTAGGACGTTTTCGAGAGGAATTTCTTGGCAGATCAAGATCAGAGCATGATCACGTGGGTAATCCTTGTGTTGTCTGTGCTTTGTATGAAATTTTTACTGCCATGGATGTTGCATCAAAGGATTGCAGGGGAGAAGCAGTAGCACCTACTTCCCTGAGGATTGCCTTAAGCAACCTATATCCAGATAGCAGCTTCTTCCAGGAGGCCCAGATGAATGATGCCTCTGAAGTGCTGGCAGTGATATTTAACTGCCTTCATCAATCATTTACTCGTGGTTCAAGTGTCTCTGATACGGAATCAGTGGAAAGCAATTCCATGGGATCTTGGGATTGTGAAAACAGTAGTTGTATAGCACATTCTCTCTTTGGAATGGACATTTTTGAACGAATGAACTGCTCCCGTTGTGGTCTTGAGTCCAGACATTTAAAGTACACTTCCTTCTTTCACAATATAAATGCCAATTCCCTCCGGACCATGAAGGAAATGAGTAGTGAAAGCTCCTTTGATGAGCTTTTGAATTTAGTGGAGATGAATCATCAATTGGCTTGTGATCCAGAATCTGGCGGCTGTGGCAATCTAAATTACATCCATCATTTTCTTTCAAGTCCACCTCATGTTTTTATGACAGTTTTAGGTTGGCAGAATACATGTGAGAGTGCTGATGATATAACAGCAACTCTGTCGGCCCTGAGCACTGAGATGGACATCAGTGTCCTTTATCGTGGTTTAGATCCAAAAAACACGCATACCTTGGTTTCAGTGGTTTGCTACTATGGGCAACATTATCATTGCTTCGCCTACAGTCGTGATCATGAACAATGGATTATGTATGATGATAAGACAGTTAAGGTAATTGGTCGGTGGGATGATGTTCTTACAATGTGTGAAAGAGGGCATCTACAACCTCAGGTTCTTTTCTTTGAAGCTGTAAACTAG 4809 0.4182 MSSNHTPHSATKIELPPQSEHSAYSTIKLECERALTALRRGNHTKALRLMKESCSRHENSAYLALIHRVQGTVCVKVASIIDDPSAKQRHLKNAIESARKAVELSPSSIEFAHFCANLLYEAANDANEYEQVVKECDRALSIENPIDPAKESLQDESQQKISTADARIAHVQNELRQLIQKSNIASLSTWMKNLGNGEEKFRLIPIRRATEDPMEVRLVQTRRPNEIKKVTKTPEERRKEIEVRVAAARLLQQKSEATPSQNEGERDDTTLDSSLGSGQRINERRKYGHVRKPGTTSERRDLVHSYWNSMNIDLKKELLRIRVCDLKSHFGSSKDTVPNDILAEALSYAEVNKTWKFWHCCRCNEKFSYSESHVQHVVQEHMGNLLPKMQRLLPQNVDNEWIEMIRNCSWKPLDASAAVKMLENQAKCRDFSFAEDTCVDHHIEENHDCFKDASNSYLGKGHDFHNCTAYRSNYCKSAETYTKEGDEFQGSVAYSLADGWPLSEDPERAKLLEKIHAVLNLLIRHKYLAAGHLNKVMQFTMDEIQGLAAGSQLLNHGLDQTPICICFLGASQLKKILKFLQDISQACGLGRYAEKTSTPADDLHNANQVAEIKEKIVLNGDASCLLLDECLLPAQISSAAAQGAVLDDVIAPTSNDVLHSTDPFLSWIFSGSSSGDQLTSWMRKREDKRHQGMEIVQTLEKEFYHLQSLSEKKCERMSYEEALQAVEDLCLEEGKKRENFTEFVQRSYESVLRKRREELIENENDVMYVSNRFELDAITNVLQEAETMNVNQFGYEETYAGVCDLESGEDDEWRMKDYLHQMDSYIEIAIQKLKEHLSVELSKIDARIMRNVAEVQQLELKLEPVSAHDYRAILLPLVKSYLRARLEDLAEKDAREKSDAAREAFLAELALDSKKVVKGGSDSSRHMEKTKDKKKNKDNRKTRDLKASSGHERLILDTIPEPDSYSVAPDNDHPDSEVLVSTNGDYLEQQEEEFRRKIELEEEEKKLEETLELQRRIENEAKQKHLAEQQKKSSETLEKSPDKVLDVQVKAVAESPDVHEHVRPHKREQLANENGYPSNLDGVLIATANGSAVLNKSSANSANQKIHRLHQSNVKQDLPNRGVSENSFQLPQQRTGKKGKRHKNASRLVEGKFDFASSEKENYEGTITDNNLRERVKFHNNQDAKNARGDNGLKTLKELQVEHDEEERFQADLKKAVRQSLDTYQALQKLPPVSRLRMPENASSQVDNFGVLLEENTTENVNGGTLLGTGLKNEVGEYNCFLNVIIQSLWHLGRFREEFLGRSRSEHDHVGNPCVVCALYEIFTAMDVASKDCRGEAVAPTSLRIALSNLYPDSSFFQEAQMNDASEVLAVIFNCLHQSFTRGSSVSDTESVESNSMGSWDCENSSCIAHSLFGMDIFERMNCSRCGLESRHLKYTSFFHNINANSLRTMKEMSSESSFDELLNLVEMNHQLACDPESGGCGNLNYIHHFLSSPPHVFMTVLGWQNTCESADDITATLSALSTEMDISVLYRGLDPKNTHTLVSVVCYYGQHYHCFAYSRDHEQWIMYDDKTVKVIGRWDDVLTMCERGHLQPQVLFFEAVN 1602
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa02g1379 1602 ProSitePatterns Zinc finger C2H2 type domain signature. 360 381 IPR013087 -
Bisa02g1379 1602 Gene3D Cysteine proteinases 1252 1600 - -
Bisa02g1379 1602 MobiDBLite consensus disorder prediction 282 298 - -
Bisa02g1379 1602 MobiDBLite consensus disorder prediction 250 298 - -
Bisa02g1379 1602 Pfam Ubiquitin carboxyl-terminal hydrolase 1270 1597 IPR001394 GO:0004843|GO:0016579
Bisa02g1379 1602 Coils Coil 990 1030 - -
Bisa02g1379 1602 Coils Coil 709 729 - -
Bisa02g1379 1602 CDD Peptidase_C19 1360 1599 - -
Bisa02g1379 1602 SUPERFAMILY Cysteine proteinases 1269 1599 IPR038765 -
Bisa02g1379 1602 Gene3D Tetratricopeptide repeat domain 14 180 IPR011990 GO:0005515
Bisa02g1379 1602 ProSiteProfiles Ubiquitin specific protease (USP) domain profile. 1269 1601 IPR028889 -
Bisa02g1379 1602 MobiDBLite consensus disorder prediction 1117 1134 - -
Bisa02g1379 1602 MobiDBLite consensus disorder prediction 1117 1144 - -
Bisa02g1379 1602 Pfam Protein of unknown function (DUF629) 303 827 IPR006865 -
Bisa02g1379 1602 Coils Coil 883 903 - -
Bisa02g1379 1602 MobiDBLite consensus disorder prediction 917 978 - -
Bisa02g1379 1602 MobiDBLite consensus disorder prediction 918 951 - -
Bisa02g1379 1602 PANTHER UBIQUITIN SPECIFIC PROTEINASE 21 1601 - -
Bisa02g1379 1602 Coils Coil 161 181 - -
Bisa02g1379 1602 Pfam Protein of unknown function (DUF627) 33 144 IPR006866 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa02g1379 Bisa-ChrBisa02 23615685 23625149 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa02g1379 27 1599 C2H2 Transcription Factor Family AT3G47890 58.945 0.0 1779