Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa02g1369 ATGGTGAGGCCTCCATGCTGCGAGAAGCTCAGTGTTAAAAGGGGTGTTTGGACTGCAGAAGAAGACGCTAAGATACTCGCATTTGTCTCCAAGCATGGATCTGGAAACTGGACTTCTGTTCCCAAAAAAACTGGTTTGAAGAGGTGTGGAAAAAGTTGCAGGCTAAGGTGGACTAATTACCTGAGGCCTGATCTTAAGCATGATAGCTTCACACTCCAAGAAGAGGATTTGATCGTTAAGCTTCATGCAGCCATAGGTAGCAGGTGGTCTATAATAGCCCAGCAACTTCCTGGGAGAACAGACGACGATGTAAAGAACTACTGGAACACAAAGCTGAAGAAGAAGCTGTCTGAAATGGGGATAGACCCTGTCACCCACAAGCCCTTCTCCAAACTCCTAGCCGATTATGGCAACATTGGGGGCATCCAGAAACCCAGCACACGAATCGGGTCTCTCAGCAGAGACTTCAAGAATTCACTGGTGTTCAAGTCAGACCCATTCCCAAAGCATCCTTCAACCCCACCAAAAATGGAAGCACCCTCTGAAAACACCTTCCTCACTAACAGGGACGTCGTTATGGAGAAGGAGGCCATCCCAGTGGCAGCTATATTCGGCGAAGGCTTCTTGCCGTCAATCTCATCGCCGTCTACTTCTTCTTCTTCCTGCTCCAATGCTGCTCAAGAAGGCTTGTCTTTGCCCTTTAGTTGGAATGACTTTCTTCTTGAAGATGTTTTCCCACCTTCTGGGGATAACCCAGTCCCAGAGATTGATAATGTGGCAATGGGTGAGAATCAGAAAGAGGTTAGGTCACAGCAAGTAGTCCCAGGCAGTGACTTTCAGTATTTGTCATCTTCCTCTGAGATTTCCTTCGTGGAAGCCATGCTTGATCAGGAAAATGAAATGTTCTTGAATTTTCCTCATCTCATGGAGGAACCATCCCACTACTGA 948 0.4715 MVRPPCCEKLSVKRGVWTAEEDAKILAFVSKHGSGNWTSVPKKTGLKRCGKSCRLRWTNYLRPDLKHDSFTLQEEDLIVKLHAAIGSRWSIIAQQLPGRTDDDVKNYWNTKLKKKLSEMGIDPVTHKPFSKLLADYGNIGGIQKPSTRIGSLSRDFKNSLVFKSDPFPKHPSTPPKMEAPSENTFLTNRDVVMEKEAIPVAAIFGEGFLPSISSPSTSSSSCSNAAQEGLSLPFSWNDFLLEDVFPPSGDNPVPEIDNVAMGENQKEVRSQQVVPGSDFQYLSSSSEISFVEAMLDQENEMFLNFPHLMEEPSHY 315
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa02g1369 315 Gene3D - 7 67 - -
Bisa02g1369 315 CDD SANT 69 112 IPR001005 -
Bisa02g1369 315 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 66 116 IPR017930 -
Bisa02g1369 315 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 65 IPR017930 -
Bisa02g1369 315 ProSiteProfiles Myb-like domain profile. 9 61 IPR001005 -
Bisa02g1369 315 CDD SANT 17 61 IPR001005 -
Bisa02g1369 315 FunFam Transcription factor RAX3 7 67 - -
Bisa02g1369 315 FunFam Os07g0634900 protein 69 128 - -
Bisa02g1369 315 SMART sant 66 114 IPR001005 -
Bisa02g1369 315 SMART sant 13 63 IPR001005 -
Bisa02g1369 315 SUPERFAMILY Homeodomain-like 11 108 IPR009057 -
Bisa02g1369 315 PANTHER F14D16.11-RELATED 1 315 - -
Bisa02g1369 315 Pfam Myb-like DNA-binding domain 14 61 IPR001005 -
Bisa02g1369 315 Pfam Myb-like DNA-binding domain 69 110 IPR001005 -
Bisa02g1369 315 Gene3D - 69 128 - -
Bisa02g1369 315 ProSiteProfiles Myb-like domain profile. 62 112 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa02g1369 Bisa-ChrBisa02 23422902 23425106 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa02g1369 1 311 MYB Transcription Factor Family AT3G28470 44.753 1.03e-75 233
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Bisa02g1369 Myb_DNA-binding 4e-15 CL0123