Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa02g1365 ATGGATCCTCCCCTCATCAACGAGTCTACATTCTCCTCTGCTAATCCATCTGCATATAGTCTCGCCGAGATTTGGCCCTTCACGGGGGACCTCACTGCCTCACCCGGATTGGGCCTCCGAATGGCCCACTTAGGTCACAATTTGCCCGGCTTTTCCGATAATTCCTTGCATCGAGATGGCTCCGCCGAGGAGTCCACCGTCACGGAGCAGAGCGCCGGCGCTGCTGCTGCTGCTGCCGCTGCTAGTGCCAGTGGAAATCAGAGGAAGAGGAAGGATGCCAGCTCTGAGGACGAGTCCTCGAAGATGGTTTCTGTGAGTAGTGCCAATGACTTGAATGACTCTGGCAATAAAAGGATAAAATTAGGAGGATCCAGGGATGAAAATGGCAGTTTGAAGGTTGAAGCAGAAGCAAGTTCAGCAGCGGGTAGCAAGTCAGCTGAACAAAGTACTAAACCTGCTGACCCACCTAAGCAAGACTATATACATGTGAGAGCAAGAAGAGGTCAAGCTACCGATAGCCACAGTCTTGCAGAAAGAGCAAGAAGGGAAAAGATCAGTGAGAGGATGAAAATGCTTCAAGATTTGGTCCCTGGATGTAACAAGGTAATTGGTAAAGCTCTTGTCCTGGATGAGATAATCAATTATATTCAATCGCTGCAGAGGCAGGTTGAGTTCCTCTCAATGAAGCTTGAAGCAGTTAATAATTCAAGAATGAACATGAACCCGACTATTGAAGGGTTCCCTTCAAAAGATCTTGGTGCTCAGCCGTTTGACGTTGCTGGAATGATATTTGGATCACAAGCAGGCAGGACATATGCTCAGGGAACACAACCTGGATGGCTGCATATGCAGATAGGTGGTGGTTTCGAGAGAGCAACATAG 882 0.4864 MDPPLINESTFSSANPSAYSLAEIWPFTGDLTASPGLGLRMAHLGHNLPGFSDNSLHRDGSAEESTVTEQSAGAAAAAAAASASGNQRKRKDASSEDESSKMVSVSSANDLNDSGNKRIKLGGSRDENGSLKVEAEASSAAGSKSAEQSTKPADPPKQDYIHVRARRGQATDSHSLAERARREKISERMKMLQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSMKLEAVNNSRMNMNPTIEGFPSKDLGAQPFDVAGMIFGSQAGRTYAQGTQPGWLHMQIGGGFERAT 293
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa02g1365 293 SMART finulus 175 225 IPR011598 GO:0046983
Bisa02g1365 293 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 169 219 IPR011598 GO:0046983
Bisa02g1365 293 MobiDBLite consensus disorder prediction 54 158 - -
Bisa02g1365 293 PANTHER STEROL REGULATORY ELEMENT-BINDING PROTEIN 64 263 IPR024097 GO:0006355
Bisa02g1365 293 MobiDBLite consensus disorder prediction 99 114 - -
Bisa02g1365 293 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 167 234 IPR036638 GO:0046983
Bisa02g1365 293 Coils Coil 216 236 - -
Bisa02g1365 293 Gene3D - 166 241 IPR036638 GO:0046983
Bisa02g1365 293 Pfam Helix-loop-helix DNA-binding domain 173 220 IPR011598 GO:0046983
Bisa02g1365 293 CDD bHLH_AtBPE_like 159 243 - -
Bisa02g1365 293 FunFam Basic helix-loop-helix transcription factor 166 239 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa02g1365 Bisa-ChrBisa02 23355608 23358589 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa02g1365 1 293 Basic Helix-Loop-Helix Transcription Factor Gene Family AT5G62610 57.525 1.86e-92 273
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Bisa02g1365 HLH 3.9e-08 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bisa02g1365 02 23355608 23358589 Bisa02g1365 02 23355608 23358589 ECH