Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa02g1358 ATGACGTCTCCCGAGCGAGCCGCCGATTCCACCATTTCCAGCGACGGCGATGGTTCTGCCTCTGCTGGAGCCGGCGAGATCATGCTGTTTGGGGTTCGAGTTGTGGTTGATTCGATGAGGAAGAGCGTGAGTATGAATAATCTGTCTCAGTACGAGCATCCTCAGGACGCCGCGAATAACAACAATAACGGAAATAAGGAAGATGCTCTCGCCCCCGGCTATGCCTCTGCCGATGAAGCCGCTGCTCATAATTCCCACAGGCATCGCGAGCGTGAGCGTAAGCGAGGGGTTCCATGGACGGAGGAAGAGCACAAGCTCTTCTTGCTGGGATTGCAGAAAGTTGGGAAAGGTGATTGGAGAGGGATCTCAAGGAACTACGTTAAAACTAGGACGCCAACACAGGTAGCCAGCCATGCTCAAAAGTACTTCCTCCGGCGAAGCAATCTTAATCGGCGACGCCGTAGATCCAGCCTTTTTGACATCACCACCGACACGGTATCAGCAATCCCAATGGAAGAAGAACAGATCCAGCATCAAGATTATGTGTCTCATTCAAATCCTGTGTGCCCCGCAACCACTGAAACTAGCAACGTCAGTGGATTTCCGATGATGCCGGTGTATTCCATGGGTGTTGCTTCTGGAGTGATTTCGGTTCCAGTTGCGAACCCAATGGAAAAACTCATTCTGGGACAAGGAATTGTGGAACCCAATGGGCCACCCCAGCTAGTCCGTTCAATTCCTGTTGTACCAGATTCTACGGCTACTACAGTTTCTAATATCACCTCCAGTTCGAATTCAGCTATTGATCCACCAACGTTGTCTCTTGGGCTATCCTTGTCATCTGATCAAAGACAGACATCATCAAGGCATTCATCTATACATGCAATGGCGTGTTTAAGCAATGGAGATAACATCATAAGTGTTGCTTAG 930 0.4968 MTSPERAADSTISSDGDGSASAGAGEIMLFGVRVVVDSMRKSVSMNNLSQYEHPQDAANNNNNGNKEDALAPGYASADEAAAHNSHRHRERERKRGVPWTEEEHKLFLLGLQKVGKGDWRGISRNYVKTRTPTQVASHAQKYFLRRSNLNRRRRRSSLFDITTDTVSAIPMEEEQIQHQDYVSHSNPVCPATTETSNVSGFPMMPVYSMGVASGVISVPVANPMEKLILGQGIVEPNGPPQLVRSIPVVPDSTATTVSNITSSSNSAIDPPTLSLGLSLSSDQRQTSSRHSSIHAMACLSNGDNIISVA 309
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa02g1358 309 ProSiteProfiles SANT domain profile. 94 147 IPR017884 -
Bisa02g1358 309 PANTHER TRANSCRIPTION FACTOR KUA1 22 249 - -
Bisa02g1358 309 MobiDBLite consensus disorder prediction 1 20 - -
Bisa02g1358 309 Pfam Myb-like DNA-binding domain 98 143 IPR001005 -
Bisa02g1358 309 FunFam transcription factor MYB1R1 97 148 - -
Bisa02g1358 309 CDD SANT 98 143 IPR001005 -
Bisa02g1358 309 SMART sant 95 145 IPR001005 -
Bisa02g1358 309 MobiDBLite consensus disorder prediction 78 97 - -
Bisa02g1358 309 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 91 147 IPR017930 -
Bisa02g1358 309 Gene3D - 97 149 - -
Bisa02g1358 309 NCBIfam myb-like DNA-binding domain, SHAQKYF class 94 145 IPR006447 GO:0003677
Bisa02g1358 309 MobiDBLite consensus disorder prediction 1 18 - -
Bisa02g1358 309 ProSiteProfiles Myb-like domain profile. 91 143 IPR001005 -
Bisa02g1358 309 SUPERFAMILY Homeodomain-like 93 148 IPR009057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa02g1358 Bisa-ChrBisa02 23295999 23297656 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Bisa02g1358 Myb_DNA-binding 1.7e-11 CL0123
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bisa08g1908 08 45835533 45837562 Bisa02g1358 02 23295999 23297656 CCT
Bisa02g1358 02 23295999 23297656 Bisa02g1358 02 23295999 23297656 ECH