Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa02g1350 ATGGAGTCGTCTTGCGATGCCGGGGGATTGCACGTGCTTGCCGTCGACGATAGTCTCGTCGATCGCAAGGTCATTGAGCGCCTGTTGAAGATTTCTTCTTGCAAAGTGACGGTGGTGGATAGTGGAACTAGAGCTCTTGAGTATTTGGGATTGGATGGAGAAAAAAGCACCTTTGGATTTGAGAGTGTGAAGGTGAATCTGATAATGACGGACTATTCCATGCCGGGGATGACAGGATATGAACTGCTCAAAAAGATCAAGGAATCATCTATTTTTAAGGAGATTCCAGTGGTGATCATGTCGTCTGAGAATATCTTAACTCGGATAGATAGGTGCTTGGAGGAAGGAGCAGAGGAGTTTCTGTTGAAGCCAGTGAAGTTATCAGATGTGAAGCGCTTGAAAGAGTTCATAATGAAGGGTGATGAAGGCAAGGAAAGTGGAGTGAAAACATCTCAGAAAAGAAAGAGATCGGATGATTATAGTCCATACACTTCATTCTCATCGGTCTCTCATCCTTGTGATCCCTCCTTTTCATCTGCTGCACTGTCCTCAAAGAAATCTAGATTGCAAACAGAGATTGAATAG 585 0.441 MESSCDAGGLHVLAVDDSLVDRKVIERLLKISSCKVTVVDSGTRALEYLGLDGEKSTFGFESVKVNLIMTDYSMPGMTGYELLKKIKESSIFKEIPVVIMSSENILTRIDRCLEEGAEEFLLKPVKLSDVKRLKEFIMKGDEGKESGVKTSQKRKRSDDYSPYTSFSSVSHPCDPSFSSAALSSKKSRLQTEIE 194
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa02g1350 194 ProSiteProfiles Response regulatory domain profile. 11 138 IPR001789 GO:0000160
Bisa02g1350 194 PANTHER TWO-COMPONENT RESPONSE REGULATOR 10 187 IPR045279 GO:0009736
Bisa02g1350 194 MobiDBLite consensus disorder prediction 161 188 - -
Bisa02g1350 194 MobiDBLite consensus disorder prediction 143 160 - -
Bisa02g1350 194 Gene3D - 10 167 - -
Bisa02g1350 194 SUPERFAMILY CheY-like 9 133 IPR011006 -
Bisa02g1350 194 CDD REC_typeA_ARR 12 133 - -
Bisa02g1350 194 MobiDBLite consensus disorder prediction 143 194 - -
Bisa02g1350 194 Pfam Response regulator receiver domain 12 130 IPR001789 GO:0000160
Bisa02g1350 194 SMART REC_2 10 134 IPR001789 GO:0000160
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa02g1350 Bisa-ChrBisa02 23146637 23148581 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa02g1350 10 161 Response Regulator Gene Family AT3G48100 73.856 7.60e-78 229
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Bisa02g1350 Response_reg 4.6e-21 CL0304
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bisa01g1653 01 28433715 28434774 Bisa02g1350 02 23146637 23148581 ECH
Bisa02g1350 02 23146637 23148581 Bisa02g1350 02 23146637 23148581 ECH