Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa02g1335 ATGCAAAAGCAGGAATTTGTGGAGCAGAGGATGCTGGCATTGGAGAAATACCTGCAGAAATTGGCAGCTCACCCAGTGATTACGAAAAGTGAGGAGCTGAAAGTGTTTCTGCAAGTGAAAGGAAAGCTGCCACTGGTGAAAAGTACAGATATGGCATCGAGGATGCTTGATGTGGCAGTGTCACAGCCCGAGGACTCTAGGGGTGAGTCAGTAGAGGCAGTGGATTCGAAGGAGGTGGCACAGCCTGCTAAGCGTGGGAGGGACTTTTTCAGGATTTTTAGGGAGCTAAAGCAATCAGCTGCTAATGATTGGGGTGGTACGAAGCCACTGGTGATAGAGGAAGACAAGGAGTTTCTGGAGAGAAAGGAGAAGTTGATTGAGTTGGCTGAATCTCTTGTAAAATGTCAGCAAGGTGTTGGTGACACAATGGGTGAATTGGGATTGGCTTTTGTAGAACTTACTAAATTTGAGACAGAGGAAGCAATATTTGACTCGCAGAGAATACGAGCAGCTGATATGAGAAATGCAGCAACTGCAGCTGTTAAATCTGGCAGATTATATAGAGAATTGAATGCACAAACAATCAAACATTTGGTGCGAAAGTCTCTGTGCTACATCAAGCAAGTACTTACTGATAGAGCAATTGAAGAACCAGATCCCAGGAGTGATTTAGAACGTGCAGTGCTGTCCTCTGTAGAATATCAAGAGTTTGAAGGAAAGTATGACACGGTGGGATTGATGGTAATCGTTGGCTGCGGTGCTGGGATCGAGGCTGGGATTGGGGAAAATGCTAGGCTATGCGTGGGAGAGGAGCTTGAGTGGGGAAATGCTGCCAATTTGCTAATCAGAAGTGTTAGAGGGAACCGAGAAGATTTCTATTGTTGTTCTGAATACAGGTGGAATTTACAATTTCCAAAGGAGGAGTTGTCAAGTGTTGAAACAAAGGATGGTCGCAAAATTAGTGTTGGTGACTGTGCTCTTTTCAAACCACCTCAAGATCGCCAACCTTTTATTGGAATAATTCGTGGGCTGACAGTTGGTAAAGAGAATAAATTAAAGTTAGGTGTAAATTGGCTTTATCGACCTACTGAAGTTAAACTTGGCAAGGGTGTCCTATTGGAGGCTGCTCCAAACGAAATTTTCTACTCCTTTCATAAGGATGAGATTCCTGCTACATCGGTGCTTCATCCTTGTAAAGTTGCATTTCTTCCTAAAGGTGTTGAACTTCCATCAGGCATTTCATCATTCGTGTGTCGCAGGGTTTATGACATTGCAAACAAGTGCTTATGCTGGTTAACTGATCAAGATTATGTTAATGAGCGTCAAGAAGAAGTAGATAAGCTATTATACAGGACTCGTATAGAAATGCATGCAACAGTGCAGCCAGGTGGTCGATCTCCCAAGCCAATGAGTAGTCCAACGTCAACGTCTCAGCTAAAATCAGGTTCAGATAGTGTCCAGAACAGTGCTTCTTCCTTTCCTTCTCAAGTTAAGGGTAGGAAAAGGGAGAGGGTAGATCAAGGGTCTGAGCCTGTAAAGCGAGAACGTACAACAAAAATAGATGATGGAGATTCTGGTCATTTTAGGCAGGATAGTATTTTAAAGGCAGAGATTGCCAAAATTACTGAAAAGGGAGGACTGATAGACACCGAAGGGGTTGAGAAATTAGTGAAACTCATGGTTCCTGATAGGAATGAAAAGAAGATAGATTTGGCTAGCAGGGCAATGCTTGCAACTGTTATTGCAGCAACAGATAAGTTTGATTGTCTTAGTCGGTTTGTGCAGCTGAGGGGTTTGCCAGTATTCGATGAATGGCTCCAAGAGGTCCACAAAGGGAAGATTGGTGATGGTAGTGGTTCTAGGGACGGTGATAATAAATCTATTGAGGAATTTCTGCTGGTATTACTACGGGCACTTGACAAGCTTCCTGTAAATCTTCAGGCTTTGCAAACTTGTAATATTGGTAAATCTGTGAATCATTTGCGAACTCATAAAAGCTCAGAAATTCAGAAGAAAGCAAGGGGCTTAGTTGACACATGGAAAAAGCGTGTTGAAGCTGAAATGAATATTAATGATTCAAAGTCTGGTTCGGGTCAGACTGTCCCCTGGCCTGCCAGACCACAAGTTCCTGAAGTTTCTCAAAGTGGGAATAGGCATTCAACTGGATCAACAGATGTTGCCGTTAAGAGCTCAGTCACACAGCATTCTGGATCCAAAACTGCCTCTGCGAAGACTGTCCAGGGAGAGAATGCTACCAGATCTGCATCTCCGGGGTCTATGAAATCAGTTCCCTCACCTGTGTCTGCATCTATGAACTCAAAAGATGGACAGCCTCGTGTTGCTGCTTGCAGTGGAGCATCTGATCTTCTCACGGCAAATGCCAAAGATGAGAAAAGTAGCAGTTCTAGTCAGTCTCACAACAATAGTCAATCTTGCTCAAGTGACCATGCGAAAACTGGGGGTATTTCGGGGAAGGAAGATGCCAGGAGCTCTACTGCAATGAGTGTGAATAAGGTATCGGGTAGCTCTTCACGCCATCGGAAAATGATTAATGGATTCCCCAGTTCAGCTCCATCTGGAGGTCAAAGGGAATCTGGGTCAACCAGAAACTCCTCCTCGCACAAACATTCAACTTCAGAGAAAATATCTCAATCTGGATTAACAGAAAAAACACTTGACGGGACTTCTATTGAGGGGAATACTTCTAAGCTGATTGTTAAGATTCCAAACAGAGGTCGAAGTCCTGCACATTGTGCAAGTGCAGGTTCTTTTGGCGATCCTTCAATTACAAACAGTCGAGCTTCTTCTCCTGTCATTTCTGAGAAGCATGATCAGTTTGATCGCAGTTCAAAGGAGAAGAGTGATTTTTGTCGAGCTAATACTGGCTCAGATATTAATACTGAGTCCTGGCAGAGTAATGATTTCAAAGATGCATTGACTGGGTCTGATGAGGGTGATGGATCACCTGCTGCTATTACTGATGAAGAGCGTGGCAGGCCTGGTTGTGATTCTAAGAAAATGTTAGAAGCATCAAAAGATGATTCCTCATCATCTGGAAATGAAAATAAAGCAGGCAATTTGCAGGATGCTTCTTTCAGTTCCATGACTGCTTTAATTGAAAGTTGTGTTAAGTTCTCTGAAGCAAATGCTTCTGTGTCTATTGCAGATGATATTGGAATGAATCTTCTTGCTAGCGTGGCTGCTGGAGAGATCTCCAAATCTGAAGTGGGAACACCAGCTGAATCTCCTGAAAGAAACATTACTAGCATTGAGCAGTCCCGCACAGGTGATGCCACGGTCAAGTCTTCTGAAGATGATCTTGTTCGAGATGAGTGTCACTCAATTGGCAGCTTTGGTGATGAACGTAATAAGCTGAATTCTGGTTTGGTGGCAAATAATGATGTTAATAATTTTAGCTCTTTGGTATCTGAAGGGAAAGCTGTAGTAGAGCACAATAAGCGTAGTGATTCATCTAATGTGGATTTGCAGCAGGTTACTGAAACTTGTTTAGAAAGCAAAGGAAAATCAAATGAAAAAACAGTTGCTGCTATGGCTGGCATTCCTGAAAGCACTGTGGAAGAAGCTAGAGACAGTGACAATTGCAAACAACTCAAGGAGAAAAAGCTTGTTGAGGGAGTATGTGCTGATGGAAATCTTGATGGGAAGGTTGGTGATGTTGCAAGAGATGAAACAGGAGCCAATGAAAAATCATTGTCACATCCCACTGGAGAAGTAGATGTTAAGGGTGATAATTGTACTAGTGAGGGATTAAATAGTGGAGGACGGGCACCCCAAAAGCTTCCTGCCATTCTTATGCAGTCTGACCCAGTAAAAGGAAAAGATGAGAATGTGCTCCAACCAGCTGGTTATAGCGCTGACAAGGGTATTAATGAATGTGAATCTGAAAAGACTGATGATAAGTCTGCTCAGAATCATGCTAGTCAATCTCAAAAGCAAAGAAATGAGTGGGAAAGTGATGCTGCGGTGATGCCTGAAAATAGAGGTGTAGGTTCAAGTGGGACCAGTCATGATGTGGAGTTTGTGGAGGAAAATTCAGAAACAAAAGAGGTTTATGATCAGTATGCAGGACAGGTATCGCACAAAGCTTCATCTACCATTCCTTCACAAGAAATGGATCAGCGTCCGGGATCTAGAGGATCAAAAGTTACAGCTCCGGAAGTACAGGAAGCTGAGGAACGCACCTCTACCACTGCAGATGCTTCGTCCATGTCTGCTTCTGGTGTGTCAGATATGGATGCTAAAGTTGAATTTGATTTAAATGAAGGTTTCATTGCAGATGATGGAAAATGTGGTGAGTTCAATAGCATCACAGCACCTGAATGTGCACCCTCTGTACGTCTGGTCAGTCCTGTGCCATTATCTGCTTCATCCATGTCTAGTGGTATTCCTGTGTCAATCACTGTGGCTGCTGCTGCAAAGGGGCCTTTTGTGCCACCTGAAGATTTATTGAAAAATAAAGGTGAGCCTGGATGGAAGGGCTCTGCTGCAACCAGTGCATTCCGACCTGCTGAGCCAAGGAAAGTTATGGATATGCCTCTTGTTGCACCAGCTACTCCTATCCCCAATGCTGCATCTGGAAAGCAGAGTCGACCAGCATTGGATATTGACTTGAATGTGCCTGATGAAAGAGTACTAGATGATATTGCTTTTCAAACTTGTGCTAATCAGACAGACTGTGCATCTCTTCCAGCTGACTGCCGTGATCCAGGTTGCAATAAAACATTAACTTCACCTGGAGGACTTGGTCTTGATTTGAACCAAGTCGATGAGACTTCAGATATGGGCAATTGCTCCACAAGCAATAGTCATAAAATTGATTTACCACTTCTACAGGTGAAATCATCATCTGGTGGTCCTCCAAATAAAGAGGTAAGTGTCCACAGGGATTTTGATTTGAATAATGGACCTGCAGTTGATGAAGTCAGCATGGAACCGTTTTTCCCTCAGCATGCCAGGAGCAGTGTGCCCTCTCAACCACCTGTTTCTGGACTCAGGATGAGTAATTCAGAACTGGGGAACTTCTCTTCATGGTTTCCTTCCACTGGGAACACCTATTCAGCTGTCACAATATCTTCAATTATGCCTGATAGAGATCAGCCCTTTTCAATTGTTGCACCTAATGGGCCACAAAGGGTACTGGGTCCTGCTACAGGGGGCAGCCCATTTGGAGCCGATGCATATAGGGGGCCAGTTTTGTCATCATCTCCTGCAGTTCCATACCCATCTACGCCATTTCAGTACCCTGTCTTCCCTTTTAATTCCAGCTTTCCTCTTCCATCAGCATCATTTTCAGGTGGATCATCTACATATGTAGATTCAATATCAGGTGGGAGGCTTTGCTTCCCTGCAGTAAGTTCGCAGTTAATAGGGCCTGCTGGTACAGTTTCATCCCTTTACCCCAGGCCTTGTGTTGTTAGTCTTCCAGATGGTAGCAATAGCAGTAGTGCTGAGAGCAGTAGGAAATGGGGAAGGCATGGTTTAGATCTTAATGCTGGGCCCGGAGGACCAGACATAGAGGGGAGAGATGAGAATTCGTCTCTTGTGCCAAGGCAACTTTCTGTTGCCAGTTCGCAAGTCCCAACTGAGGAGCAAGCAAGGATGTTTCAGCTGGCTAGTGTTCTTAAGAGGAAGGAGCCTGATGGTGGGTGGGATAGCTTCAAGCAGTCCTCATGGCAATAG 5700 0.4412 MQKQEFVEQRMLALEKYLQKLAAHPVITKSEELKVFLQVKGKLPLVKSTDMASRMLDVAVSQPEDSRGESVEAVDSKEVAQPAKRGRDFFRIFRELKQSAANDWGGTKPLVIEEDKEFLERKEKLIELAESLVKCQQGVGDTMGELGLAFVELTKFETEEAIFDSQRIRAADMRNAATAAVKSGRLYRELNAQTIKHLVRKSLCYIKQVLTDRAIEEPDPRSDLERAVLSSVEYQEFEGKYDTVGLMVIVGCGAGIEAGIGENARLCVGEELEWGNAANLLIRSVRGNREDFYCCSEYRWNLQFPKEELSSVETKDGRKISVGDCALFKPPQDRQPFIGIIRGLTVGKENKLKLGVNWLYRPTEVKLGKGVLLEAAPNEIFYSFHKDEIPATSVLHPCKVAFLPKGVELPSGISSFVCRRVYDIANKCLCWLTDQDYVNERQEEVDKLLYRTRIEMHATVQPGGRSPKPMSSPTSTSQLKSGSDSVQNSASSFPSQVKGRKRERVDQGSEPVKRERTTKIDDGDSGHFRQDSILKAEIAKITEKGGLIDTEGVEKLVKLMVPDRNEKKIDLASRAMLATVIAATDKFDCLSRFVQLRGLPVFDEWLQEVHKGKIGDGSGSRDGDNKSIEEFLLVLLRALDKLPVNLQALQTCNIGKSVNHLRTHKSSEIQKKARGLVDTWKKRVEAEMNINDSKSGSGQTVPWPARPQVPEVSQSGNRHSTGSTDVAVKSSVTQHSGSKTASAKTVQGENATRSASPGSMKSVPSPVSASMNSKDGQPRVAACSGASDLLTANAKDEKSSSSSQSHNNSQSCSSDHAKTGGISGKEDARSSTAMSVNKVSGSSSRHRKMINGFPSSAPSGGQRESGSTRNSSSHKHSTSEKISQSGLTEKTLDGTSIEGNTSKLIVKIPNRGRSPAHCASAGSFGDPSITNSRASSPVISEKHDQFDRSSKEKSDFCRANTGSDINTESWQSNDFKDALTGSDEGDGSPAAITDEERGRPGCDSKKMLEASKDDSSSSGNENKAGNLQDASFSSMTALIESCVKFSEANASVSIADDIGMNLLASVAAGEISKSEVGTPAESPERNITSIEQSRTGDATVKSSEDDLVRDECHSIGSFGDERNKLNSGLVANNDVNNFSSLVSEGKAVVEHNKRSDSSNVDLQQVTETCLESKGKSNEKTVAAMAGIPESTVEEARDSDNCKQLKEKKLVEGVCADGNLDGKVGDVARDETGANEKSLSHPTGEVDVKGDNCTSEGLNSGGRAPQKLPAILMQSDPVKGKDENVLQPAGYSADKGINECESEKTDDKSAQNHASQSQKQRNEWESDAAVMPENRGVGSSGTSHDVEFVEENSETKEVYDQYAGQVSHKASSTIPSQEMDQRPGSRGSKVTAPEVQEAEERTSTTADASSMSASGVSDMDAKVEFDLNEGFIADDGKCGEFNSITAPECAPSVRLVSPVPLSASSMSSGIPVSITVAAAAKGPFVPPEDLLKNKGEPGWKGSAATSAFRPAEPRKVMDMPLVAPATPIPNAASGKQSRPALDIDLNVPDERVLDDIAFQTCANQTDCASLPADCRDPGCNKTLTSPGGLGLDLNQVDETSDMGNCSTSNSHKIDLPLLQVKSSSGGPPNKEVSVHRDFDLNNGPAVDEVSMEPFFPQHARSSVPSQPPVSGLRMSNSELGNFSSWFPSTGNTYSAVTISSIMPDRDQPFSIVAPNGPQRVLGPATGGSPFGADAYRGPVLSSSPAVPYPSTPFQYPVFPFNSSFPLPSASFSGGSSTYVDSISGGRLCFPAVSSQLIGPAGTVSSLYPRPCVVSLPDGSNSSSAESSRKWGRHGLDLNAGPGGPDIEGRDENSSLVPRQLSVASSQVPTEEQARMFQLASVLKRKEPDGGWDSFKQSSWQ 1899
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa02g1335 1899 CDD TFIIS_I 624 685 - -
Bisa02g1335 1899 MobiDBLite consensus disorder prediction 1073 1103 - -
Bisa02g1335 1899 MobiDBLite consensus disorder prediction 1364 1383 - -
Bisa02g1335 1899 MobiDBLite consensus disorder prediction 1396 1415 - -
Bisa02g1335 1899 MobiDBLite consensus disorder prediction 924 939 - -
Bisa02g1335 1899 Pfam BAH domain 319 426 IPR001025 GO:0003682
Bisa02g1335 1899 ProSiteProfiles PX domain profile. 1 44 IPR001683 GO:0035091
Bisa02g1335 1899 MobiDBLite consensus disorder prediction 1815 1870 - -
Bisa02g1335 1899 MobiDBLite consensus disorder prediction 908 1027 - -
Bisa02g1335 1899 MobiDBLite consensus disorder prediction 1013 1027 - -
Bisa02g1335 1899 MobiDBLite consensus disorder prediction 825 895 - -
Bisa02g1335 1899 MobiDBLite consensus disorder prediction 1299 1325 - -
Bisa02g1335 1899 MobiDBLite consensus disorder prediction 1079 1097 - -
Bisa02g1335 1899 MobiDBLite consensus disorder prediction 990 1012 - -
Bisa02g1335 1899 Gene3D - 299 539 IPR043151 -
Bisa02g1335 1899 Gene3D - 1 55 IPR036871 GO:0035091
Bisa02g1335 1899 MobiDBLite consensus disorder prediction 1361 1416 - -
Bisa02g1335 1899 MobiDBLite consensus disorder prediction 456 526 - -
Bisa02g1335 1899 SUPERFAMILY PX domain 3 40 IPR036871 GO:0035091
Bisa02g1335 1899 MobiDBLite consensus disorder prediction 793 818 - -
Bisa02g1335 1899 MobiDBLite consensus disorder prediction 959 978 - -
Bisa02g1335 1899 SUPERFAMILY Conserved domain common to transcription factors TFIIS, elongin A, CRSP70 588 698 IPR035441 -
Bisa02g1335 1899 PANTHER BAH AND TFIIS DOMAIN-CONTAINING PROTEIN-RELATED 312 1899 - -
Bisa02g1335 1899 SMART BAH_4 318 433 IPR001025 GO:0003682
Bisa02g1335 1899 MobiDBLite consensus disorder prediction 497 526 - -
Bisa02g1335 1899 MobiDBLite consensus disorder prediction 940 958 - -
Bisa02g1335 1899 MobiDBLite consensus disorder prediction 1853 1870 - -
Bisa02g1335 1899 Gene3D Arfaptin homology (AH) domain/BAR domain 110 213 IPR027267 -
Bisa02g1335 1899 MobiDBLite consensus disorder prediction 1231 1267 - -
Bisa02g1335 1899 MobiDBLite consensus disorder prediction 793 895 - -
Bisa02g1335 1899 Pfam TFIIS helical bundle-like domain 635 684 IPR017923 -
Bisa02g1335 1899 ProSiteProfiles BAH domain profile. 318 433 IPR001025 GO:0003682
Bisa02g1335 1899 ProSiteProfiles TFIIS N-terminal domain profile. 600 687 IPR017923 -
Bisa02g1335 1899 MobiDBLite consensus disorder prediction 465 496 - -
Bisa02g1335 1899 MobiDBLite consensus disorder prediction 688 781 - -
Bisa02g1335 1899 Gene3D Conserved domain common to transcription factors TFIIS, elongin A, CRSP70 551 688 IPR035441 -
Bisa02g1335 1899 SMART TFS2_5 606 686 IPR003617 GO:0005634
Bisa02g1335 1899 MobiDBLite consensus disorder prediction 710 777 - -
Bisa02g1335 1899 Pfam PX domain 3 39 IPR001683 GO:0035091
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa02g1335 Bisa-ChrBisa02 22778779 22789136 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR IWS1 Bisa02g1335 BAH 7.6e-11 No_clan