Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa02g1330 ATGCCTTGTGATCTCCATTACCTCATTTCTTTGTGGTTTTCTGTTTTGGCTTGTATAGACCTGGTTGAGTACGAGATCAGGTCTCATTTACCAGGAACTTCAGTAAGGATGGTGATAAGATCATGCATTAATTTGATGGAGTTGGTGCCAAAGGATGATTTAGATTCCCCTCAAAGTCCGAGAGGTCTACAACGAGCTATGACTGATCCAGGAATTTTGTCCAATATTGATAATGATTCGCTTGCTAGGTCATCAGAATCCCGTCGAAAGATAATTATAGTGGCAAATTTTCTTCCTCTCAATGCCCAAAAGGATGAATCTGGCACATGGTGCTTTAGCTATGATGAAGATTCAATTTTGTTGCAGCTAAAGGATGGAGTTCCTTCTGATATCAATGTTGTTTATGTGGGATCTCTAGCGGTCGATGTTGATAAAAGTGAGCAAGAGAAAGTTTCTCTCAAGTTGCATGAGGAATTCAATTGCTGGCCTATCTTTCTTCCTTCAGACATCAAGAAAAAGTTTTATAATGGATTCTGCAGGCAGTATTTGTGGCCTCTATTCCATTATGTGTTTCCCATGAATCCAGCATTTTGCAATAGCTTTTTCGATGGGTCACTTTGGGAGGCTTATGTTTCAGCTAACAAGATATTTGCGGACAAGGTGGTGGAAGTTCTTAATCCGGAAGATGATTATGTATGGGTTCATGATTATCATCTTATGGTCCTACCAACATTTCTGCGCGGCCGATTCTATAGTGTAAGGCTAGGACTTTTCCTCCATAGCCCATTTCCCTCTTCTGAAATTTTTAAGACTCTGCCGGTCAGAGATGAAATTTTGAGAGCACTGCTTAATACAGATTTAATAGGTTTTCAAACATACGACTATGCTCGCCATTTTTTGTCTTGCTGCAGTCGGATACTTGGTTTGGAATACGAATCCAAAAGGGGTTACATTGAGATCGAATACTTGGGCCGGACAATCAACATCAAAATTTTGCCTGCAGGGATTCACATGGGTCGACTTCAATCTGCCTTAGATCACCCATCTTCTTCTGTCAAATTCAGAGAAATTCGTGACCAATTTTGGGGGAGAAAGCTCGTTCTTGGTGTTGATGATATGGACATATTCAAAGGCATCGGTCTAAAGCTCCTGGCCTTTGAACAGCTCCTGAAGCAGTGTCCAAAACTGCAAGGTGAACTAGTACTTGTCCAGATTGTGAATCCCCCAAGGAGTACAAGCAAAGATGTTGAGCAAGCAAAGAATGAGACATACCTTACAGCCAAAACGATAAATGAAAGTTTTGGTTTCCCGGGTTATGAACCTGTCATCATCATTGATAAACCCATTTCCTTTTATGAGAAGGCAGCCTATTATGCTTCGGCAGAATGTTGCATTGTGAATGCGGTGAGAGATGGTATGAATTTAATTCCATATAAGTATATCGTCTGCAGGCAAAGGACTCCCAAAATGGATGAAGCCTTAGGGATCAGTCCCAAGGTTCCTCGTACAAGCGTACTTGTTGTTTCTGAGTTCATAGGTTGCTCACCATCTCTTAGTGGGGCTATCCGGGTAAACCCATGGGACACTAATGCTGTGGCTGAAGCACTAAGTTTGGCAATCAACATGCCGTATCATGAAAGACAATTGAGGCATGAGAAGCACTACCGATATGTTCGCGATCATGATGTGGCTTATTGGGCCAGAAGTTTTATACAGGATCTCCAGCGATCATGCATGCATCATAATACTAATCGTTGCTGGGGCCTTGGCATTGGTCTGCATTTCAGAATCTTTTCCCTTTCTCCTAGTTTCAACAAGCTGTCCATCGACCATGTTGTATCTGCATATAAAAATACTAATTGCAGGGCAATATTTTTGGACTATGATGGTACAATTGTCCCCCAAAACTCCGTCGTTAAAAGCCCTAGTCCTGATGTCATATCCGTCATAAATAGTCTTAGCAGTGACCCTCAGAACACTGTTTTTATAGTAAGTGGCAGGGGGAAGACCTCACTGAGCGAATGGTTCGATTCATGTGAGGATCTCGGTGTAGCAGCTGAGCATGGTTATTTTATAAGATGGGACAAAAGGTCAAGTTGGAAAACCAGTGACAGAGTTAATGATTTTACGTGGAAAGGTATTGTTGAACCTGTGATGCAGTCGTATACCGAATTAACAGATGGCTCCTACATCGAGACCAAGGAGACTGCCTTGGTATGGCATTATTATAAAGCTGATTCTGATTTTGGATCATGGCAAGCCAAGGAGCTTCTGGATCACCTTGAAAGTGTGCTTGCAACTGAGCCAGCAGTAGCCAAAAAGGGACAGCATATTGTTGAAGTTAAGCCACGGGGGATTACTAAAGGGTTAGCAGCAAAGGAAGTTCTTGCTACCCTGAGAAAGAATGGGAAGCTGCCGGATTTTGTGCTGTGCATCGGGGATGACAGATCGGACGAGGACATGTTCGAAAGCATAACAACCAAAGCTGAGATGGAAGGCCTCACTCCAGAGCCAAAAGTCTATGCCTGCACTGTTGGCCAGAAACCAAGCAAAGCCATGTACTACCTGGATAATCCTGCGGATGTGATTAAGCTTCTCAAAGAGCTTGTTGCTGTAGGGTCTGAGTCAAGATGCTCAAAAGAAGCCCCTTTAGAAACAACCCAAGTTTGTTCTGAAGGAATCTGTGAAATGCAGAATATGGAAATTGGTGAAGCAGAGGAATAG 2724 0.4266 MPCDLHYLISLWFSVLACIDLVEYEIRSHLPGTSVRMVIRSCINLMELVPKDDLDSPQSPRGLQRAMTDPGILSNIDNDSLARSSESRRKIIIVANFLPLNAQKDESGTWCFSYDEDSILLQLKDGVPSDINVVYVGSLAVDVDKSEQEKVSLKLHEEFNCWPIFLPSDIKKKFYNGFCRQYLWPLFHYVFPMNPAFCNSFFDGSLWEAYVSANKIFADKVVEVLNPEDDYVWVHDYHLMVLPTFLRGRFYSVRLGLFLHSPFPSSEIFKTLPVRDEILRALLNTDLIGFQTYDYARHFLSCCSRILGLEYESKRGYIEIEYLGRTINIKILPAGIHMGRLQSALDHPSSSVKFREIRDQFWGRKLVLGVDDMDIFKGIGLKLLAFEQLLKQCPKLQGELVLVQIVNPPRSTSKDVEQAKNETYLTAKTINESFGFPGYEPVIIIDKPISFYEKAAYYASAECCIVNAVRDGMNLIPYKYIVCRQRTPKMDEALGISPKVPRTSVLVVSEFIGCSPSLSGAIRVNPWDTNAVAEALSLAINMPYHERQLRHEKHYRYVRDHDVAYWARSFIQDLQRSCMHHNTNRCWGLGIGLHFRIFSLSPSFNKLSIDHVVSAYKNTNCRAIFLDYDGTIVPQNSVVKSPSPDVISVINSLSSDPQNTVFIVSGRGKTSLSEWFDSCEDLGVAAEHGYFIRWDKRSSWKTSDRVNDFTWKGIVEPVMQSYTELTDGSYIETKETALVWHYYKADSDFGSWQAKELLDHLESVLATEPAVAKKGQHIVEVKPRGITKGLAAKEVLATLRKNGKLPDFVLCIGDDRSDEDMFESITTKAEMEGLTPEPKVYACTVGQKPSKAMYYLDNPADVIKLLKELVAVGSESRCSKEAPLETTQVCSEGICEMQNMEIGEAEE 907
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa02g1330 907 SUPERFAMILY HAD-like 622 870 IPR036412 -
Bisa02g1330 907 PANTHER TREHALOSE-6-PHOSPHATE SYNTHASE 67 869 IPR001830 GO:0003824|GO:0005992
Bisa02g1330 907 CDD HAD_TPP 623 864 - -
Bisa02g1330 907 Gene3D - 621 733 IPR023214 -
Bisa02g1330 907 Gene3D - 751 882 IPR023214 -
Bisa02g1330 907 NCBIfam trehalose-phosphatase 622 870 IPR003337 GO:0003824|GO:0005992
Bisa02g1330 907 FunFam Alpha,alpha-trehalose-phosphate synthase 344 559 - -
Bisa02g1330 907 FunFam Trehalose-6-phosphate synthase 8 85 343 - -
Bisa02g1330 907 FunFam Trehalose-6-phosphate synthase 2 705 784 - -
Bisa02g1330 907 Pfam Trehalose-phosphatase 625 859 IPR003337 GO:0003824|GO:0005992
Bisa02g1330 907 CDD GT20_TPS 90 575 IPR001830 GO:0003824|GO:0005992
Bisa02g1330 907 FunFam Alpha,alpha-trehalose-phosphate synthase [UDP-forming] 6 751 882 - -
Bisa02g1330 907 NCBIfam HAD-IIB family hydrolase 623 826 IPR006379 -
Bisa02g1330 907 Gene3D Glycogen Phosphorylase B; 82 342 - -
Bisa02g1330 907 FunFam alpha,alpha-trehalose-phosphate synthase [UDP-forming] 6 621 738 - -
Bisa02g1330 907 Pfam Glycosyltransferase family 20 90 575 IPR001830 GO:0003824|GO:0005992
Bisa02g1330 907 Gene3D Glycogen Phosphorylase B; 343 560 - -
Bisa02g1330 907 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 90 577 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa02g1330 Bisa-ChrBisa02 22698331 22702047 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa02g1330 37 894 Trehalose Biosynthesis Gene Families AT1G23870 62.284 0.0 1133
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bisa08g1954 08 46987699 46990520 Bisa02g1330 02 22698331 22702047 CCT
Bisa02g1330 02 22698331 22702047 Bisa02g1330 02 22698331 22702047 ECH