Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa02g1328 ATGAATATATCTAATCTTCAAAGATACACAGCTTCTTCTTCGGTTGGAATACGAAACCATTTCTCAAAATCCTTCTCTCTTAGGAGGAAGGTACCCTGGTGGTACCAAATCATCGATCCCAAATCCGAATTCGCGGACAAATGGAATCGCACCTTCCTTTACGCATGCTTCGTTGCGCTCTTCCTCGACCCTCTCTATTTCTACTTCCCCATCATCGGCAACGAGAATTGCATGAAAATTGACTTGGTCCTCGGCGTCTTCGTGACTCTCTTTCGCACCCTTACCGATATGTTCTTCGTCTTCCACATTGTTCTCAAGTTCCGTACTGGCTACTATACTTCCCGCTCTTTTGGCATCGGTGATATAGTCACTGATCCCAAACTAATCGCAATTCGCTACGTGAAACACGATTTCATCACCGATCTTCTCGCCTGCCTCCCTCTCCCTCAGATTATGATTTGGTTCGTGATTCCGTCATTCAGAGATACAACGGCAGCTCATGCGAATCATACTCTCTCTCTTATTGTTCTTCTTCAGTATATTCCCCGATTCTTTCAGATTTTTCCTCTGCAACGCCGGATTATAAAAACCAGTGGGCTTATAACCAAGACTGCTTTGGCAGGGTCTTTGTACAATCTTGGATTTTACGTGTTGGCCAGCCATATTTTGGGGGCTGCGTATTATGTGTTGGCGATTCAGCGTCAGTCTCAATGTTGGAGAGAAATTTGCGACCAGGAGGATAACAAAACGCACTCTCCGGGTTGTTCACCAAGTTTTCTTGATTGCGACTCCCTGAACAATCCTGCACGGATTGCTTGGTACAACAAAACTGGCCTTACCTCCGTCTGTGATGCTAAGAACGAAGAAAGCCCCTTTGTGTTTGGAATGTATTCTGATGCTTTTACTGACTCAGTTGCTTCATCTAAGTTCATAGAAAGATACTTTTATTGCCTCTGGTGGGGTTTGAAAAGTCTATGTGCATATGGACAGAATCTAGAAACAAGCCCCTTCAGTTCTGAAACTTTATTTGGGAGTTTCATTTGCATCTCAGGTCTAATTCTCTTTGCGCTTCTCATTGGTAACATGCAGAACTATTTGCAATCTACTACTGCAAGACTTGAAGAATGGAGGATTAAACAAAGAGATACAGAAGAGTGGATGAGGCATCGCCAACTTCCACCAGAACTGCAAGAACGTGTTCGTCGGTTTGGTCAATATAAATGGCTAGCCACCAGAGGTGTAGATGAAGAATCTATTTTGCGTGAATTGCCTTTGGACCTTCGGCGTGAGATTCAGAGGCATCTTTGTCTTGCTCTCGTTCGTCGGGTTCCATTCTTCGGTCGAATGGATGATCAGCTGCTAGATGCCATATGTGAACGACTTGTGCCATCTCTGAACACAAAGGGCATGTACCTTAAAAGGGAAGGAGACCCAGTAAAAGAGATGCTTTTCATCATAAGAGGACAAGTAGAGAGCTCCACAACAGATGGAGGGAGATCAGGATTCTTCAACTCTATCACCCTAAGGCCAGGTGATTTTTGTGGAGAAGAATTGCTGACATGGGCTTTGGTCCCCACTAATAGTACCCTTCCATCATCCACTCGAACGGTCAAGACCATCACTGAAGTAGAAGCATTTGCACTCAGAGCTGAAGACCTCAGGTTCTTTGCCACCCAGTTCAAGAAGCTACACAGCAAGAGAATCCAGCACGCTTTCAGGTACTATTCCCACCAATGGAGGGCTTGGGGAGCTTCCTTTATACAAGCTGCTTGGAGACGCCATGTGAAGAGGAAGTTAGCAATCGAGCTGTTGGAGAAGGAGAACCTGTTAGAATCAACAGAAATAGAGAGTGGTGAAGAAGGATCATCTGTTTCTGGAGCGGACACCGCAACGAGCAACAAGTTTGGAAGCCTTACAACTACATTTTTGGCTTCCAAATTTGCTGCAAATACTAGAAGGGGGATACTTCAGAAAGTGGCAATCCCAGATGAAAACAGCTTGAAGATGCCCAAGCTGTTTAAGCCAACAGACCCTGATTTTGACCAAGAATAG 2052 0.4483 MNISNLQRYTASSSVGIRNHFSKSFSLRRKVPWWYQIIDPKSEFADKWNRTFLYACFVALFLDPLYFYFPIIGNENCMKIDLVLGVFVTLFRTLTDMFFVFHIVLKFRTGYYTSRSFGIGDIVTDPKLIAIRYVKHDFITDLLACLPLPQIMIWFVIPSFRDTTAAHANHTLSLIVLLQYIPRFFQIFPLQRRIIKTSGLITKTALAGSLYNLGFYVLASHILGAAYYVLAIQRQSQCWREICDQEDNKTHSPGCSPSFLDCDSLNNPARIAWYNKTGLTSVCDAKNEESPFVFGMYSDAFTDSVASSKFIERYFYCLWWGLKSLCAYGQNLETSPFSSETLFGSFICISGLILFALLIGNMQNYLQSTTARLEEWRIKQRDTEEWMRHRQLPPELQERVRRFGQYKWLATRGVDEESILRELPLDLRREIQRHLCLALVRRVPFFGRMDDQLLDAICERLVPSLNTKGMYLKREGDPVKEMLFIIRGQVESSTTDGGRSGFFNSITLRPGDFCGEELLTWALVPTNSTLPSSTRTVKTITEVEAFALRAEDLRFFATQFKKLHSKRIQHAFRYYSHQWRAWGASFIQAAWRRHVKRKLAIELLEKENLLESTEIESGEEGSSVSGADTATSNKFGSLTTTFLASKFAANTRRGILQKVAIPDENSLKMPKLFKPTDPDFDQE 683
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa02g1328 683 Gene3D Jelly Rolls 443 562 IPR014710 -
Bisa02g1328 683 Pfam Cyclic nucleotide-binding domain 468 556 IPR000595 -
Bisa02g1328 683 ProSiteProfiles cAMP/cGMP binding motif profile. 445 530 IPR000595 -
Bisa02g1328 683 Coils Coil 596 616 - -
Bisa02g1328 683 Gene3D - 71 369 - -
Bisa02g1328 683 SUPERFAMILY Voltage-gated potassium channels 40 367 - -
Bisa02g1328 683 FunFam Cyclic nucleotide-gated ion channel 1 443 560 - -
Bisa02g1328 683 SMART cnmp_10 445 575 IPR000595 -
Bisa02g1328 683 FunFam Cyclic nucleotide-gated ion channel 1 372 436 - -
Bisa02g1328 683 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL 15-RELATED-RELATED 29 680 - -
Bisa02g1328 683 CDD CAP_ED 445 554 IPR000595 -
Bisa02g1328 683 Gene3D Helix hairpin bin 371 436 - -
Bisa02g1328 683 Pfam Ion transport protein 48 372 IPR005821 GO:0005216|GO:0006811|GO:0016020|GO:0055085
Bisa02g1328 683 SUPERFAMILY cAMP-binding domain-like 374 569 IPR018490 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa02g1328 Bisa-ChrBisa02 22622340 22624862 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa02g1328 3 680 Ion Channels AT3G48010 60.876 0.0 870